RNA–Protein interactions for RNA: ENST00000560993.1

SEMA4B-217, Transcript of semaphorin 4B, humanhuman

TSL 4

Gene SEMA4B, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-217ENST00000560993 CDC37Q16543 378 aaPredicted RBP17.32■□□□□ 0.36
SEMA4B-217ENST00000560993 FOXD4L5Q5VV16 416 aaPredicted RBP17.32■□□□□ 0.36
SEMA4B-217ENST00000560993 WWC2Q6AWC2 1192 aa17.32■□□□□ 0.36
SEMA4B-217ENST00000560993 FAM177A1Q8N128 213 aaPredicted RBP17.32■□□□□ 0.36
SEMA4B-217ENST00000560993 ZNF713Q8N859 430 aaPredicted RBP17.32■□□□□ 0.36
SEMA4B-217ENST00000560993 FOXD4L4Q8WXT5 416 aaPredicted RBP17.32■□□□□ 0.36
SEMA4B-217ENST00000560993 GPKOWQ92917 476 aaPredicted RBP eCLIP17.32■□□□□ 0.36
SEMA4B-217ENST00000560993 FTOQ9C0B1 505 aaKnown RBP eCLIP17.32■□□□□ 0.36
SEMA4B-217ENST00000560993 SH3GLB2Q9NR46 395 aa17.32■□□□□ 0.36
SEMA4B-217ENST00000560993 VPS54Q9P1Q0 977 aa17.32■□□□□ 0.36
SEMA4B-217ENST00000560993 LOC102724159A0A0B4J2E5 919 aa17.31■□□□□ 0.36
SEMA4B-217ENST00000560993 STXBP3O00186 592 aa17.31■□□□□ 0.36
SEMA4B-217ENST00000560993 F13A1P00488 732 aa17.31■□□□□ 0.36
SEMA4B-217ENST00000560993 PTPN11Q06124 597 aaPredicted RBP17.31■□□□□ 0.36
SEMA4B-217ENST00000560993 PWP2Q15269 919 aaKnown RBP17.31■□□□□ 0.36
SEMA4B-217ENST00000560993 QRICH1Q2TAL8 776 aa17.31■□□□□ 0.36
SEMA4B-217ENST00000560993 HEATR3Q7Z4Q2 680 aa17.31■□□□□ 0.36
SEMA4B-217ENST00000560993 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.31■□□□□ 0.36
SEMA4B-217ENST00000560993 KAT2BQ92831 832 aa17.31■□□□□ 0.36
SEMA4B-217ENST00000560993 BARHL2Q9NY43 387 aa17.31■□□□□ 0.36
SEMA4B-217ENST00000560993 PPP1R11O60927 126 aaPredicted RBP17.3■□□□□ 0.36
SEMA4B-217ENST00000560993 NBNO60934 754 aa17.3■□□□□ 0.36
SEMA4B-217ENST00000560993 BAIAP3O94812 1187 aa17.3■□□□□ 0.36
SEMA4B-217ENST00000560993 MMP1P03956 469 aa17.3■□□□□ 0.36
SEMA4B-217ENST00000560993 GDF6Q6KF10 455 aaPredicted RBP17.3■□□□□ 0.36
SEMA4B-217ENST00000560993 CCDC62Q6P9F0 684 aa17.3■□□□□ 0.36
SEMA4B-217ENST00000560993 TRAF7Q6Q0C0 670 aa17.3■□□□□ 0.36
SEMA4B-217ENST00000560993 FAM178BQ8IXR5 827 aa17.3■□□□□ 0.36
SEMA4B-217ENST00000560993 RETREG2Q8NC44 543 aa17.3■□□□□ 0.36
SEMA4B-217ENST00000560993 CCDC148Q8NFR7 591 aa17.3■□□□□ 0.36
SEMA4B-217ENST00000560993 PHF20Q9BVI0 1012 aa17.3■□□□□ 0.36
SEMA4B-217ENST00000560993 LMCD1Q9NZU5 365 aa17.3■□□□□ 0.36
SEMA4B-217ENST00000560993 ADD3Q9UEY8 706 aaKnown RBP17.3■□□□□ 0.36
SEMA4B-217ENST00000560993 KCNJ14Q9UNX9 436 aa17.3■□□□□ 0.36
SEMA4B-217ENST00000560993 KIF28PB7ZC32 967 aa17.29■□□□□ 0.36
SEMA4B-217ENST00000560993 CXCL10P02778 98 aa17.29■□□□□ 0.36
SEMA4B-217ENST00000560993 CALML3P27482 149 aa17.29■□□□□ 0.36
SEMA4B-217ENST00000560993 ERVK-21P61565 698 aa17.29■□□□□ 0.36
SEMA4B-217ENST00000560993 RPS6P62753 249 aaKnown RBP17.29■□□□□ 0.36
SEMA4B-217ENST00000560993 RESTQ13127 1097 aa17.29■□□□□ 0.36
SEMA4B-217ENST00000560993 BFSP2Q13515 415 aa17.29■□□□□ 0.36
SEMA4B-217ENST00000560993 TYW1BQ6NUM6 668 aa17.29■□□□□ 0.36
SEMA4B-217ENST00000560993 ALYREFQ86V81 257 aaKnown RBP17.29■□□□□ 0.36
SEMA4B-217ENST00000560993 WNT8BQ93098 351 aa17.29■□□□□ 0.36
SEMA4B-217ENST00000560993 UBE2ZQ9H832 354 aaPredicted RBP17.29■□□□□ 0.36
SEMA4B-217ENST00000560993 ZNF318Q5VUA4 2279 aa17.29■□□□□ 0.36
SEMA4B-217ENST00000560993 LINC01553A4QN01 128 aa17.28■□□□□ 0.36
SEMA4B-217ENST00000560993 KPNA6O60684 536 aa17.28■□□□□ 0.36
SEMA4B-217ENST00000560993 GJB5O95377 273 aa17.28■□□□□ 0.36
SEMA4B-217ENST00000560993 NAPAP54920 295 aa17.28■□□□□ 0.36
SEMA4B-217ENST00000560993 NLRP5P59047 1200 aa17.28■□□□□ 0.36
SEMA4B-217ENST00000560993 RBL2Q08999 1139 aa17.28■□□□□ 0.36
SEMA4B-217ENST00000560993 MBTPS1Q14703 1052 aa17.28■□□□□ 0.36
SEMA4B-217ENST00000560993 SAFBQ15424 915 aaKnown RBP eCLIP17.28■□□□□ 0.36
SEMA4B-217ENST00000560993 PTGISQ16647 500 aa17.28■□□□□ 0.36
SEMA4B-217ENST00000560993 MCTP1Q6DN14 999 aa17.28■□□□□ 0.36
SEMA4B-217ENST00000560993 PPP1R18Q6NYC8 613 aa17.28■□□□□ 0.36
SEMA4B-217ENST00000560993 FERMT3Q86UX7 667 aa17.28■□□□□ 0.36
SEMA4B-217ENST00000560993 SCFD2Q8WU76 684 aa17.28■□□□□ 0.36
SEMA4B-217ENST00000560993 CCDC12Q8WUD4 166 aaPredicted RBP17.28■□□□□ 0.36
SEMA4B-217ENST00000560993 AFG1LQ8WV93 481 aa17.28■□□□□ 0.36
SEMA4B-217ENST00000560993 TNPO1Q92973 898 aaKnown RBP17.28■□□□□ 0.36
SEMA4B-217ENST00000560993 AMNQ9BXJ7 453 aa17.28■□□□□ 0.36
SEMA4B-217ENST00000560993 MTUS1Q9ULD2 1270 aa17.28■□□□□ 0.36
SEMA4B-217ENST00000560993 SIP14410 1827 aa17.28■□□□□ 0.36
SEMA4B-217ENST00000560993 ESYT2A0FGR8 921 aa17.27■□□□□ 0.36
SEMA4B-217ENST00000560993 NKRFO15226 690 aaKnown RBP eCLIP17.27■□□□□ 0.36
SEMA4B-217ENST00000560993 TXNP10599 105 aaKnown RBP17.27■□□□□ 0.36
SEMA4B-217ENST00000560993 IL9P15248 144 aa17.27■□□□□ 0.36
SEMA4B-217ENST00000560993 MKRN4PQ13434 485 aaPredicted RBP17.27■□□□□ 0.36
SEMA4B-217ENST00000560993 HIC1Q14526 733 aa17.27■□□□□ 0.36
SEMA4B-217ENST00000560993 NPY5RQ15761 445 aa17.27■□□□□ 0.36
SEMA4B-217ENST00000560993 TRIM71Q2Q1W2 868 aaKnown RBP17.27■□□□□ 0.36
SEMA4B-217ENST00000560993 LEXMQ3ZCV2 418 aa17.27■□□□□ 0.36
SEMA4B-217ENST00000560993 RNF207Q6ZRF8 634 aa17.27■□□□□ 0.36
SEMA4B-217ENST00000560993 SESTD1Q86VW0 696 aa17.27■□□□□ 0.36
SEMA4B-217ENST00000560993 FBXO11Q86XK2 927 aa17.27■□□□□ 0.36
SEMA4B-217ENST00000560993 GJD3Q8N144 294 aa17.27■□□□□ 0.36
SEMA4B-217ENST00000560993 AFAP1L1Q8TED9 768 aa17.27■□□□□ 0.36
SEMA4B-217ENST00000560993 TBC1D5Q92609 795 aa17.27■□□□□ 0.36
SEMA4B-217ENST00000560993 ZSCAN16Q9H4T2 348 aaPredicted RBP17.27■□□□□ 0.36
SEMA4B-217ENST00000560993 USP34Q70CQ2 3546 aa17.27■□□□□ 0.35
SEMA4B-217ENST00000560993 SELPP16109 830 aa17.26■□□□□ 0.35
SEMA4B-217ENST00000560993 KRT2P35908 639 aa17.26■□□□□ 0.35
SEMA4B-217ENST00000560993 ARHGAP1Q07960 439 aa17.26■□□□□ 0.35
SEMA4B-217ENST00000560993 PDE4DQ08499 809 aa17.26■□□□□ 0.35
SEMA4B-217ENST00000560993 TRAF1Q13077 416 aa17.26■□□□□ 0.35
SEMA4B-217ENST00000560993 GALNT17Q6IS24 598 aa17.26■□□□□ 0.35
SEMA4B-217ENST00000560993 DIS3L2Q8IYB7 885 aaKnown RBP17.26■□□□□ 0.35
SEMA4B-217ENST00000560993 DAGLBQ8NCG7 672 aa17.26■□□□□ 0.35
SEMA4B-217ENST00000560993 CAGE1Q8TC20 777 aa17.26■□□□□ 0.35
SEMA4B-217ENST00000560993 RAD9AQ99638 391 aa17.26■□□□□ 0.35
SEMA4B-217ENST00000560993 ZMYND12Q9H0C1 365 aa17.26■□□□□ 0.35
SEMA4B-217ENST00000560993 BRMS1Q9HCU9 246 aa17.26■□□□□ 0.35
SEMA4B-217ENST00000560993 PCDHA1Q9Y5I3 950 aa17.26■□□□□ 0.35
SEMA4B-217ENST00000560993 ATP6V1DQ9Y5K8 247 aa17.26■□□□□ 0.35
SEMA4B-217ENST00000560993 PRR33A8MZF0 331 aa17.25■□□□□ 0.35
SEMA4B-217ENST00000560993 MMP3P08254 477 aa17.25■□□□□ 0.35
SEMA4B-217ENST00000560993 CKBP12277 381 aa17.25■□□□□ 0.35
SEMA4B-217ENST00000560993 KCNA5P22460 613 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms