RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 CREG2Q8IUH2 290 aa16.13■□□□□ 0.17
CRTC3-210ENST00000560927 GMCL1P1Q8NEA9 526 aa16.13■□□□□ 0.17
CRTC3-210ENST00000560927 COG1Q8WTW3 980 aa16.13■□□□□ 0.17
CRTC3-210ENST00000560927 LSM14BQ9BX40 385 aaKnown RBP16.13■□□□□ 0.17
CRTC3-210ENST00000560927 SERPINA10Q9UK55 444 aa16.13■□□□□ 0.17
CRTC3-210ENST00000560927 TACC1O75410 805 aa16.13■□□□□ 0.17
CRTC3-210ENST00000560927 APBA3O96018 575 aa16.13■□□□□ 0.17
CRTC3-210ENST00000560927 TUBBP07437 444 aa16.13■□□□□ 0.17
CRTC3-210ENST00000560927 POLR2FP61218 127 aaKnown RBP16.13■□□□□ 0.17
CRTC3-210ENST00000560927 SYDE2Q5VT97 1194 aa16.13■□□□□ 0.17
CRTC3-210ENST00000560927 GMCL1Q96IK5 515 aa16.13■□□□□ 0.17
CRTC3-210ENST00000560927 GBP3Q9H0R5 595 aa16.13■□□□□ 0.17
CRTC3-210ENST00000560927 BCAS3Q9H6U6 928 aa16.13■□□□□ 0.17
CRTC3-210ENST00000560927 CEP72Q9P209 647 aa16.13■□□□□ 0.17
CRTC3-210ENST00000560927 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.13■□□□□ 0.17
CRTC3-210ENST00000560927 SPDYE3A6NKU9 549 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 CHRNA5P30532 468 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 MARSP56192 900 aaKnown RBP16.12■□□□□ 0.17
CRTC3-210ENST00000560927 FKBP1AP62942 108 aaKnown RBP16.12■□□□□ 0.17
CRTC3-210ENST00000560927 RASSF7Q02833 373 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 ADAM9Q13443 819 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 GIT2Q14161 759 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 Q4G0T1 1027 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 TDRD12Q587J7 1177 aaKnown RBP16.12■□□□□ 0.17
CRTC3-210ENST00000560927 HAUS3Q68CZ6 603 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 PSMB7Q99436 277 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 EDEM3Q9BZQ6 932 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 POLD4Q9HCU8 107 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 ZNF646O15015 1829 aaPredicted RBP16.12■□□□□ 0.17
CRTC3-210ENST00000560927 SLX4Q8IY92 1834 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 MSH4O15457 936 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 CXCR5P32302 372 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 SREBF1P36956 1147 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 CYP4A11Q02928 519 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 MAPK8IP2Q13387 824 aaPredicted RBP16.12■□□□□ 0.17
CRTC3-210ENST00000560927 NFRKBQ6P4R8 1299 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 SLC30A10Q6XR72 485 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 RPGRIP1Q96KN7 1286 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 PRMT6Q96LA8 375 aaPredicted RBP16.12■□□□□ 0.17
CRTC3-210ENST00000560927 HINFPQ9BQA5 517 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 REEP2Q9BRK0 252 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 PITPNM2Q9BZ72 1349 aa16.12■□□□□ 0.17
CRTC3-210ENST00000560927 NCK2O43639 380 aa16.11■□□□□ 0.17
CRTC3-210ENST00000560927 BMP3P12645 472 aa16.11■□□□□ 0.17
CRTC3-210ENST00000560927 RPA1P27694 616 aa16.11■□□□□ 0.17
CRTC3-210ENST00000560927 HOXD13P35453 343 aa16.11■□□□□ 0.17
CRTC3-210ENST00000560927 ZC3H3Q8IXZ2 948 aaKnown RBP16.11■□□□□ 0.17
CRTC3-210ENST00000560927 GSPT2Q8IYD1 628 aaKnown RBP16.11■□□□□ 0.17
CRTC3-210ENST00000560927 ADAM21Q9UKJ8 722 aa16.11■□□□□ 0.17
CRTC3-210ENST00000560927 SSU72P8A0A1W2PR75 194 aa16.11■□□□□ 0.17
CRTC3-210ENST00000560927 PLSCR1O15162 318 aa16.11■□□□□ 0.17
CRTC3-210ENST00000560927 PJA2O43164 708 aa16.11■□□□□ 0.17
CRTC3-210ENST00000560927 BUB1O43683 1085 aa16.11■□□□□ 0.17
CRTC3-210ENST00000560927 NPM3O75607 178 aaKnown RBP16.11■□□□□ 0.17
CRTC3-210ENST00000560927 GNA14O95837 355 aa16.11■□□□□ 0.17
CRTC3-210ENST00000560927 MYBL2P10244 700 aa16.11■□□□□ 0.17
CRTC3-210ENST00000560927 NR2F2P24468 414 aa16.11■□□□□ 0.17
CRTC3-210ENST00000560927 SFMBT2Q5VUG0 894 aa16.11■□□□□ 0.17
CRTC3-210ENST00000560927 SFR1Q86XK3 245 aa16.11■□□□□ 0.17
CRTC3-210ENST00000560927 MSL3Q8N5Y2 521 aaKnown RBP16.11■□□□□ 0.17
CRTC3-210ENST00000560927 SMARCAL1Q9NZC9 954 aa16.11■□□□□ 0.17
CRTC3-210ENST00000560927 DNM3Q9UQ16 869 aa16.11■□□□□ 0.17
CRTC3-210ENST00000560927 RSPH10B2B2RC85 870 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 H0YIN7 160 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 TBX3O15119 743 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 RSPH10BP0C881 870 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 ECE1P42892 770 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 MMP14P50281 582 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 ARID5AQ03989 594 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 RBM26Q5T8P6 1007 aaKnown RBP16.1■□□□□ 0.17
CRTC3-210ENST00000560927 SYT2Q8N9I0 419 aaPredicted RBP16.1■□□□□ 0.17
CRTC3-210ENST00000560927 GDAP1L1Q96MZ0 367 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 CSRNP1Q96S65 589 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 OSBPL9Q96SU4 736 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 EHD2Q9NZN4 543 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 VPS18Q9P253 973 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 VAV3Q9UKW4 847 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 MYH10P35580 1976 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 TARSL2A2RTX5 802 aaKnown RBP16.1■□□□□ 0.17
CRTC3-210ENST00000560927 SLC26A4O43511 780 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 EIF3JO75822 258 aaKnown RBP16.1■□□□□ 0.17
CRTC3-210ENST00000560927 MYBP10242 640 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 KCNH2Q12809 1159 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 SLC9C1Q4G0N8 1177 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 KIAA1755Q5JYT7 1200 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 ERMNQ8TAM6 284 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 PRR12Q9ULL5 1215 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 ATRNL1Q5VV63 1379 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 SMCHD1A6NHR9 2005 aa16.1■□□□□ 0.17
CRTC3-210ENST00000560927 RBAK-RBAKDNI3L0D1 243 aa16.09■□□□□ 0.17
CRTC3-210ENST00000560927 EML1O00423 815 aa16.09■□□□□ 0.17
CRTC3-210ENST00000560927 SERPING1P05155 500 aa16.09■□□□□ 0.17
CRTC3-210ENST00000560927 RAPGEF1Q13905 1077 aa16.09■□□□□ 0.17
CRTC3-210ENST00000560927 EZH2Q15910 746 aaKnown RBP16.09■□□□□ 0.17
CRTC3-210ENST00000560927 ENOX2Q16206 610 aaKnown RBP16.09■□□□□ 0.17
CRTC3-210ENST00000560927 EDRF1Q3B7T1 1238 aa16.09■□□□□ 0.17
CRTC3-210ENST00000560927 ALS2CR12Q96Q35 445 aa16.09■□□□□ 0.17
CRTC3-210ENST00000560927 BHMT2Q9H2M3 363 aa16.09■□□□□ 0.17
CRTC3-210ENST00000560927 RGL1Q9NZL6 768 aa16.09■□□□□ 0.17
CRTC3-210ENST00000560927 YDJCA8MPS7 323 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms