RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 GTF2IRD1Q9UHL9 959 aa7.54□□□□□ -1.2
USP8-213ENST00000560885 MTUS1Q9ULD2 1270 aa7.54□□□□□ -1.2
USP8-213ENST00000560885 LAMA4Q16363 1823 aa7.54□□□□□ -1.2
USP8-213ENST00000560885 COL4A6Q14031 1691 aa7.54□□□□□ -1.2
USP8-213ENST00000560885 FRMPD2Q68DX3 1309 aaPredicted RBP7.53□□□□□ -1.2
USP8-213ENST00000560885 EMSYQ7Z589 1322 aa7.53□□□□□ -1.2
USP8-213ENST00000560885 SNHG28P0DPA3 235 aa7.53□□□□□ -1.2
USP8-213ENST00000560885 SSTR3P32745 418 aaPredicted RBP7.53□□□□□ -1.2
USP8-213ENST00000560885 STXBP2Q15833 593 aa7.53□□□□□ -1.2
USP8-213ENST00000560885 LY6KQ17RY6 165 aa7.53□□□□□ -1.2
USP8-213ENST00000560885 CSPP1Q1MSJ5 1256 aa7.53□□□□□ -1.2
USP8-213ENST00000560885 GPATCH4Q5T3I0 446 aaKnown RBP7.53□□□□□ -1.2
USP8-213ENST00000560885 PTCRAQ6ISU1 281 aaPredicted RBP7.53□□□□□ -1.2
USP8-213ENST00000560885 NEK9Q8TD19 979 aa7.53□□□□□ -1.2
USP8-213ENST00000560885 NSUN6Q8TEA1 469 aaKnown RBP7.53□□□□□ -1.2
USP8-213ENST00000560885 IRF7Q92985 503 aa7.53□□□□□ -1.2
USP8-213ENST00000560885 MRPL38Q96DV4 380 aaKnown RBP7.53□□□□□ -1.2
USP8-213ENST00000560885 SAMD11Q96NU1 681 aa7.53□□□□□ -1.2
USP8-213ENST00000560885 IWS1Q96ST2 819 aa7.53□□□□□ -1.2
USP8-213ENST00000560885 TOMM22Q9NS69 142 aa7.53□□□□□ -1.2
USP8-213ENST00000560885 HDAC6Q9UBN7 1215 aa7.53□□□□□ -1.2
USP8-213ENST00000560885 NXF1Q9UBU9 619 aaKnown RBP7.53□□□□□ -1.2
USP8-213ENST00000560885 FAM50BQ9Y247 325 aa7.53□□□□□ -1.2
USP8-213ENST00000560885 ZMYM6O95789 1325 aa7.52□□□□□ -1.2
USP8-213ENST00000560885 CFAP54Q96N23 3096 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 HAS3O00219 553 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 LGR5O75473 907 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 F2P00734 622 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 FGAP02671 866 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 AMHP03971 560 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 PCP11498 1178 aaKnown RBP7.52□□□□□ -1.21
USP8-213ENST00000560885 MRE11P49959 708 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 HTRA4P83105 476 aaPredicted RBP7.52□□□□□ -1.21
USP8-213ENST00000560885 LAMC2Q13753 1193 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 PTPROQ16827 1216 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 TCTN1Q2MV58 587 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 TRIM71Q2Q1W2 868 aaKnown RBP7.52□□□□□ -1.21
USP8-213ENST00000560885 USH1GQ495M9 461 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 RRP12Q5JTH9 1297 aaKnown RBP7.52□□□□□ -1.21
USP8-213ENST00000560885 ZNF618Q5T7W0 954 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 C20orf194Q5TEA3 1177 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 VPS53Q5VIR6 699 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 SEPT14Q6ZU15 432 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 CHST3Q7LGC8 479 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 METTL3Q86U44 580 aaKnown RBP7.52□□□□□ -1.21
USP8-213ENST00000560885 TICAM2Q86XR7 235 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 MCF2L2Q86YR7 1114 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 PPTC7Q8NI37 304 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 C17orf80Q9BSJ5 609 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 HELLSQ9NRZ9 838 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 PRKAG3Q9UGI9 489 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 DDX41Q9UJV9 622 aaKnown RBP7.52□□□□□ -1.21
USP8-213ENST00000560885 RCAN3Q9UKA8 241 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 ABCB11O95342 1321 aa7.52□□□□□ -1.21
USP8-213ENST00000560885 H3BNC9 293 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 DCXO43602 365 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 PPFIA4O75335 1185 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 EIF3JO75822 258 aaKnown RBP7.51□□□□□ -1.21
USP8-213ENST00000560885 IL9P15248 144 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 MX1P20591 662 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 NT5C2P49902 561 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 FUT2Q10981 343 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 MBTPS1Q14703 1052 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 COL19A1Q14993 1142 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 KIAA0753Q2KHM9 967 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 EPC2Q52LR7 807 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 TIGD5Q53EQ6 642 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 FAM117BQ6P1L5 589 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 KCNV1Q6PIU1 500 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 BRICD5Q6PL45 260 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.51□□□□□ -1.215e-6■■■■□ 19.3
USP8-213ENST00000560885 DHX37Q8IY37 1157 aaKnown RBP7.51□□□□□ -1.21
USP8-213ENST00000560885 BANK1Q8NDB2 785 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 SYTL5Q8TDW5 730 aaPredicted RBP7.51□□□□□ -1.21
USP8-213ENST00000560885 TBC1D5Q92609 795 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 PABPC5Q96DU9 382 aaKnown RBP7.51□□□□□ -1.21
USP8-213ENST00000560885 MRGPRX2Q96LB1 330 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 TAAR1Q96RJ0 339 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 UIMC1Q96RL1 719 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 RMDN3Q96TC7 470 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 ALG1Q9BT22 464 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 UPF3BQ9BZI7 483 aaKnown RBP7.51□□□□□ -1.21
USP8-213ENST00000560885 DAXXQ9UER7 740 aaPredicted RBP7.51□□□□□ -1.21
USP8-213ENST00000560885 MRVI1Q9Y6F6 885 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 KAT6AQ92794 2004 aa7.51□□□□□ -1.21
USP8-213ENST00000560885 ZNF318Q5VUA4 2279 aa7.5□□□□□ -1.21
USP8-213ENST00000560885 DOCK5Q9H7D0 1870 aa7.5□□□□□ -1.21
USP8-213ENST00000560885 RSPH10B2B2RC85 870 aa7.5□□□□□ -1.21
USP8-213ENST00000560885 H3BQ06 376 aaPredicted RBP7.5□□□□□ -1.21
USP8-213ENST00000560885 NCK2O43639 380 aa7.5□□□□□ -1.21
USP8-213ENST00000560885 RSPH10BP0C881 870 aa7.5□□□□□ -1.21
USP8-213ENST00000560885 HOXD8P13378 290 aaPredicted RBP7.5□□□□□ -1.21
USP8-213ENST00000560885 LORP23490 312 aaPredicted RBP7.5□□□□□ -1.21
USP8-213ENST00000560885 NHLH1Q02575 133 aa7.5□□□□□ -1.21
USP8-213ENST00000560885 ZP2Q05996 745 aa7.5□□□□□ -1.21
USP8-213ENST00000560885 MCMDC2Q4G0Z9 681 aa7.5□□□□□ -1.21
USP8-213ENST00000560885 PLEKHG4Q58EX7 1191 aa7.5□□□□□ -1.21
USP8-213ENST00000560885 ARHGEF16Q5VV41 709 aa7.5□□□□□ -1.21
USP8-213ENST00000560885 MYSM1Q5VVJ2 828 aa7.5□□□□□ -1.21
USP8-213ENST00000560885 MFSD6Q6ZSS7 791 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms