RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 LRCH2Q5VUJ6 765 aa13.68□□□□□ -0.22
IRF9-211ENST00000560852 FERMT3Q86UX7 667 aa13.68□□□□□ -0.22
IRF9-211ENST00000560852 SESTD1Q86VW0 696 aa13.68□□□□□ -0.22
IRF9-211ENST00000560852 IGSF22Q8N9C0 903 aa13.68□□□□□ -0.22
IRF9-211ENST00000560852 TEKT3Q9BXF9 490 aa13.68□□□□□ -0.22
IRF9-211ENST00000560852 PCDHA10Q9Y5I2 948 aa13.68□□□□□ -0.22
IRF9-211ENST00000560852 ATP6V1DQ9Y5K8 247 aa13.68□□□□□ -0.22
IRF9-211ENST00000560852 MAFBQ9Y5Q3 323 aaPredicted RBP13.68□□□□□ -0.22
IRF9-211ENST00000560852 STK24Q9Y6E0 443 aa13.68□□□□□ -0.22
IRF9-211ENST00000560852 MYH7BA7E2Y1 1941 aa13.68□□□□□ -0.22
IRF9-211ENST00000560852 MCM3APO60318 1980 aa13.67□□□□□ -0.22
IRF9-211ENST00000560852 MYADML2A6NDP7 307 aa13.67□□□□□ -0.22
IRF9-211ENST00000560852 WDR64B1ANS9 1081 aa13.67□□□□□ -0.22
IRF9-211ENST00000560852 SLC26A4O43511 780 aa13.67□□□□□ -0.22
IRF9-211ENST00000560852 GAS7O60861 476 aa13.67□□□□□ -0.22
IRF9-211ENST00000560852 YEATS4O95619 227 aa13.67□□□□□ -0.22
IRF9-211ENST00000560852 ASGR1P07306 291 aa13.67□□□□□ -0.22
IRF9-211ENST00000560852 OR52Z1P0C646 297 aa13.67□□□□□ -0.22
IRF9-211ENST00000560852 HOXC8P31273 242 aa13.67□□□□□ -0.22
IRF9-211ENST00000560852 MCM7P33993 719 aa13.67□□□□□ -0.22
IRF9-211ENST00000560852 RGS19P49795 217 aa13.67□□□□□ -0.22
IRF9-211ENST00000560852 PTPN11Q06124 597 aaPredicted RBP13.67□□□□□ -0.22
IRF9-211ENST00000560852 SNX17Q15036 470 aa13.67□□□□□ -0.22
IRF9-211ENST00000560852 EPHA7Q15375 998 aa13.67□□□□□ -0.22
IRF9-211ENST00000560852 ANO1Q5XXA6 986 aa13.67□□□□□ -0.22
IRF9-211ENST00000560852 SPRYD3Q8NCJ5 442 aa13.67□□□□□ -0.22
IRF9-211ENST00000560852 KAT2BQ92831 832 aa13.67□□□□□ -0.22
IRF9-211ENST00000560852 LENG1Q96BZ8 264 aaPredicted RBP13.67□□□□□ -0.22
IRF9-211ENST00000560852 ZNF396Q96N95 335 aaPredicted RBP13.67□□□□□ -0.22
IRF9-211ENST00000560852 HSD17B14Q9BPX1 270 aa13.67□□□□□ -0.22
IRF9-211ENST00000560852 TTC12Q9H892 705 aaPredicted RBP13.67□□□□□ -0.22
IRF9-211ENST00000560852 PPP6R2O75170 966 aa13.66□□□□□ -0.22
IRF9-211ENST00000560852 LYPLA2O95372 231 aa13.66□□□□□ -0.22
IRF9-211ENST00000560852 SUPT20HL2P0C7V6 817 aa13.66□□□□□ -0.22
IRF9-211ENST00000560852 CDK7P50613 346 aa13.66□□□□□ -0.22
IRF9-211ENST00000560852 SF3A1Q15459 793 aaKnown RBP13.66□□□□□ -0.22
IRF9-211ENST00000560852 LINC00301Q8NCQ3 95 aa13.66□□□□□ -0.22
IRF9-211ENST00000560852 NEK9Q8TD19 979 aa13.66□□□□□ -0.22
IRF9-211ENST00000560852 FERMT2Q96AC1 680 aa13.66□□□□□ -0.22
IRF9-211ENST00000560852 AK8Q96MA6 479 aa13.66□□□□□ -0.22
IRF9-211ENST00000560852 USP28Q96RU2 1077 aa13.66□□□□□ -0.22
IRF9-211ENST00000560852 PCYT2Q99447 389 aa13.66□□□□□ -0.22
IRF9-211ENST00000560852 MTG1Q9BT17 334 aaPredicted RBP13.66□□□□□ -0.22
IRF9-211ENST00000560852 KATNAL1Q9BW62 490 aa13.66□□□□□ -0.22
IRF9-211ENST00000560852 UNC45AQ9H3U1 944 aa13.66□□□□□ -0.22
IRF9-211ENST00000560852 SMARCAD1Q9H4L7 1026 aa13.66□□□□□ -0.22
IRF9-211ENST00000560852 DAXXQ9UER7 740 aaPredicted RBP13.66□□□□□ -0.22
IRF9-211ENST00000560852 RCOR1Q9UKL0 485 aa13.66□□□□□ -0.22
IRF9-211ENST00000560852 CFAP45Q9UL16 551 aa13.66□□□□□ -0.22
IRF9-211ENST00000560852 KBTBD13C9JR72 458 aa13.65□□□□□ -0.22
IRF9-211ENST00000560852 NOP56O00567 594 aaKnown RBP13.65□□□□□ -0.22
IRF9-211ENST00000560852 LGALS2P05162 132 aa13.65□□□□□ -0.22
IRF9-211ENST00000560852 PSAPP07602 524 aa13.65□□□□□ -0.22
IRF9-211ENST00000560852 XRCC6P12956 609 aaKnown RBP eCLIP13.65□□□□□ -0.22
IRF9-211ENST00000560852 EN2P19622 333 aaPredicted RBP13.65□□□□□ -0.22
IRF9-211ENST00000560852 PTGS1P23219 599 aa13.65□□□□□ -0.22
IRF9-211ENST00000560852 TCF7P36402 384 aaPredicted RBP13.65□□□□□ -0.22
IRF9-211ENST00000560852 IRX5P78411 483 aaPredicted RBP13.65□□□□□ -0.22
IRF9-211ENST00000560852 NBR1Q14596 966 aa13.65□□□□□ -0.22
IRF9-211ENST00000560852 IL17AQ16552 155 aa13.65□□□□□ -0.22
IRF9-211ENST00000560852 MIS18BP1Q6P0N0 1132 aa13.65□□□□□ -0.22
IRF9-211ENST00000560852 NFRKBQ6P4R8 1299 aa13.65□□□□□ -0.22
IRF9-211ENST00000560852 CLEC17AQ6ZS10 378 aa13.65□□□□□ -0.22
IRF9-211ENST00000560852 TNPO1Q92973 898 aaKnown RBP13.65□□□□□ -0.22
IRF9-211ENST00000560852 DISC1Q9NRI5 854 aa13.65□□□□□ -0.22
IRF9-211ENST00000560852 CHMP5Q9NZZ3 219 aa13.65□□□□□ -0.22
IRF9-211ENST00000560852 SRPRBQ9Y5M8 271 aaKnown RBP13.65□□□□□ -0.22
IRF9-211ENST00000560852 GRIN2DO15399 1336 aa13.64□□□□□ -0.23
IRF9-211ENST00000560852 A0A1W2PQ45 241 aaPredicted RBP13.64□□□□□ -0.23
IRF9-211ENST00000560852 A0A1W2PQY0 241 aa13.64□□□□□ -0.23
IRF9-211ENST00000560852 H3BRB1 525 aa13.64□□□□□ -0.23
IRF9-211ENST00000560852 DKC1O60832 514 aaKnown RBP eCLIP13.64□□□□□ -0.23
IRF9-211ENST00000560852 P4HBP07237 508 aaKnown RBP13.64□□□□□ -0.23
IRF9-211ENST00000560852 ATP2B1P20020 1258 aa13.64□□□□□ -0.23
IRF9-211ENST00000560852 TXKP42681 527 aa13.64□□□□□ -0.23
IRF9-211ENST00000560852 STAT5BP51692 787 aa13.64□□□□□ -0.23
IRF9-211ENST00000560852 BEX3Q00994 111 aa13.64□□□□□ -0.23
IRF9-211ENST00000560852 FAM173BQ6P4H8 233 aa13.64□□□□□ -0.23
IRF9-211ENST00000560852 DTHD1Q6ZMT9 781 aa13.64□□□□□ -0.23
IRF9-211ENST00000560852 NECAB2Q7Z6G3 386 aa13.64□□□□□ -0.23
IRF9-211ENST00000560852 ZNF579Q8NAF0 562 aaKnown RBP13.64□□□□□ -0.23
IRF9-211ENST00000560852 GLT1D1Q96MS3 346 aa13.64□□□□□ -0.23
IRF9-211ENST00000560852 TOX2Q96NM4 488 aa13.64□□□□□ -0.23
IRF9-211ENST00000560852 POLR3CQ9BUI4 534 aaPredicted RBP13.64□□□□□ -0.23
IRF9-211ENST00000560852 RAB34Q9BZG1 259 aa13.64□□□□□ -0.23
IRF9-211ENST00000560852 TUT1Q9H6E5 874 aaKnown RBP13.64□□□□□ -0.23
IRF9-211ENST00000560852 ERAP1Q9NZ08 941 aa13.64□□□□□ -0.23
IRF9-211ENST00000560852 TCEAL9Q9UHQ7 104 aa13.64□□□□□ -0.23
IRF9-211ENST00000560852 TELO2Q9Y4R8 837 aa13.64□□□□□ -0.23
IRF9-211ENST00000560852 CLIC4Q9Y696 253 aa13.64□□□□□ -0.23
IRF9-211ENST00000560852 IGSF9BQ9UPX0 1349 aa13.64□□□□□ -0.23
IRF9-211ENST00000560852 EML1O00423 815 aa13.63□□□□□ -0.23
IRF9-211ENST00000560852 SLITRK3O94933 977 aa13.63□□□□□ -0.23
IRF9-211ENST00000560852 STBD1O95210 358 aa13.63□□□□□ -0.23
IRF9-211ENST00000560852 RPA1P27694 616 aa13.63□□□□□ -0.23
IRF9-211ENST00000560852 LONP1P36776 959 aaKnown RBP13.63□□□□□ -0.23
IRF9-211ENST00000560852 ADAM17P78536 824 aa13.63□□□□□ -0.23
IRF9-211ENST00000560852 TMEM266Q2M3C6 531 aa13.63□□□□□ -0.23
IRF9-211ENST00000560852 HYIQ5T013 277 aa13.63□□□□□ -0.23
IRF9-211ENST00000560852 FAM160B1Q5W0V3 765 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms