RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 HESX1Q9UBX0 185 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 PCDHB12Q9Y5F1 795 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 TACC3Q9Y6A5 838 aa10.66□□□□□ -0.7
TRPM1-212ENST00000560801 TFAMQ00059 246 aaKnown RBP10.65□□□□□ -0.7
TRPM1-212ENST00000560801 PAN2Q504Q3 1202 aaKnown RBP10.65□□□□□ -0.7
TRPM1-212ENST00000560801 THEM5Q8N1Q8 247 aa10.65□□□□□ -0.7
TRPM1-212ENST00000560801 GOLGA5Q8TBA6 731 aa10.65□□□□□ -0.7
TRPM1-212ENST00000560801 ENTPD7Q9NQZ7 604 aa10.65□□□□□ -0.7
TRPM1-212ENST00000560801 N4BP3O15049 544 aa10.65□□□□□ -0.7
TRPM1-212ENST00000560801 DNM1Q05193 864 aaKnown RBP10.65□□□□□ -0.7
TRPM1-212ENST00000560801 XKR3Q5GH77 459 aa10.65□□□□□ -0.7
TRPM1-212ENST00000560801 VGLL2Q8N8G2 317 aa10.65□□□□□ -0.7
TRPM1-212ENST00000560801 NEK9Q8TD19 979 aa10.65□□□□□ -0.7
TRPM1-212ENST00000560801 ANKRD36BP1Q96IX9 119 aa10.65□□□□□ -0.7
TRPM1-212ENST00000560801 C11orf49Q9H6J7 331 aa10.65□□□□□ -0.7
TRPM1-212ENST00000560801 JMJD4Q9H9V9 463 aa10.65□□□□□ -0.7
TRPM1-212ENST00000560801 TUBE1Q9UJT0 475 aa10.65□□□□□ -0.7
TRPM1-212ENST00000560801 MON2Q7Z3U7 1717 aa10.65□□□□□ -0.7
TRPM1-212ENST00000560801 H3BRB1 525 aa10.65□□□□□ -0.7
TRPM1-212ENST00000560801 TADA2AO75478 443 aa10.65□□□□□ -0.7
TRPM1-212ENST00000560801 HOXC6P09630 235 aa10.65□□□□□ -0.7
TRPM1-212ENST00000560801 TUT1Q9H6E5 874 aaKnown RBP10.65□□□□□ -0.7
TRPM1-212ENST00000560801 MAP3K20Q9NYL2 800 aaKnown RBP10.65□□□□□ -0.7
TRPM1-212ENST00000560801 SUCLA2Q9P2R7 463 aaPredicted RBP10.65□□□□□ -0.7
TRPM1-212ENST00000560801 SPDYE16A6NNV3 312 aaPredicted RBP10.64□□□□□ -0.71
TRPM1-212ENST00000560801 GPR182O15218 404 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 CUTAO60888 179 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 SYT1P21579 422 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 TCF7P36402 384 aaPredicted RBP10.64□□□□□ -0.71
TRPM1-212ENST00000560801 PTGISQ16647 500 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 IQCEQ6IPM2 695 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 TMC7Q7Z402 723 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 TTC30AQ86WT1 665 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 RIC8AQ9NPQ8 531 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 TMEM260Q9NX78 707 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 BARHL2Q9NY43 387 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 CNTN2Q02246 1040 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 SPA17Q15506 151 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 JAKMIP2Q96AA8 810 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 GPRASP2Q96D09 838 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 TSPY26PQ9H489 355 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 KCNH3Q9ULD8 1083 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 GDAQ9Y2T3 454 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 TYW5A2RUC4 315 aaKnown RBP10.64□□□□□ -0.71
TRPM1-212ENST00000560801 NFIBO00712 420 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 POLR2DO15514 142 aaKnown RBP10.64□□□□□ -0.71
TRPM1-212ENST00000560801 CPB1P15086 417 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 MYO1EQ12965 1108 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 PPIGQ13427 754 aaKnown RBP eCLIP10.64□□□□□ -0.71
TRPM1-212ENST00000560801 VEPH1Q14D04 833 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 CCDC144BQ3MJ40 725 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 SAMD3Q8N6K7 520 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 RNF149Q8NC42 400 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 INTS4Q96HW7 963 aaKnown RBP10.64□□□□□ -0.71
TRPM1-212ENST00000560801 TPCN1Q9ULQ1 816 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 RCAN1P53805 252 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 SPAG1Q07617 926 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 ZNF568Q3ZCX4 644 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 LRRC45Q96CN5 670 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 BHMT2Q9H2M3 363 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 LY9Q9HBG7 655 aa10.64□□□□□ -0.71
TRPM1-212ENST00000560801 SKIP12755 728 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 USP11P51784 963 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 PEX3P56589 373 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 PIGOQ8TEQ8 1089 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 CCDC97Q96F63 343 aaPredicted RBP10.63□□□□□ -0.71
TRPM1-212ENST00000560801 DDX20Q9UHI6 824 aaKnown RBP10.63□□□□□ -0.71
TRPM1-212ENST00000560801 RSPH10B2B2RC85 870 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 KIF3CO14782 793 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 CHGBP05060 677 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 RSPH10BP0C881 870 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 SYN1P17600 705 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 MDM2Q00987 491 aaPredicted RBP10.63□□□□□ -0.71
TRPM1-212ENST00000560801 SCRN1Q12765 414 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 MYSM1Q5VVJ2 828 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 CC2D1AQ6P1N0 951 aaPredicted RBP10.63□□□□□ -0.71
TRPM1-212ENST00000560801 FBXO18Q8NFZ0 1043 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 STAMQ92783 540 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 EXOC4Q96A65 974 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 FOXP1Q9H334 677 aaPredicted RBP10.63□□□□□ -0.71
TRPM1-212ENST00000560801 A1CFQ9NQ94 594 aaKnown RBP10.63□□□□□ -0.71
TRPM1-212ENST00000560801 ST7Q9NRC1 585 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 EMILIN3Q9NT22 766 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 CAPN9O14815 690 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 TNNT1P13805 278 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 U2AF1L4Q8WU68 220 aaKnown RBP10.63□□□□□ -0.71
TRPM1-212ENST00000560801 PAWRQ96IZ0 340 aaKnown RBP10.63□□□□□ -0.71
TRPM1-212ENST00000560801 HIPK3Q9H422 1215 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 ATP8B3O60423 1300 aa10.63□□□□□ -0.71
TRPM1-212ENST00000560801 CLDN3O15551 220 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 TGFB3P10600 412 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 NR5A1Q13285 461 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 MB21D2Q8IYB1 491 aaPredicted RBP10.62□□□□□ -0.71
TRPM1-212ENST00000560801 SMAP1Q8IYB5 467 aaPredicted RBP10.62□□□□□ -0.71
TRPM1-212ENST00000560801 PANK4Q9NVE7 773 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 AFG3L2Q9Y4W6 797 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 NWD2Q9ULI1 1742 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 ALDH5A1P51649 535 aaPredicted RBP10.62□□□□□ -0.71
TRPM1-212ENST00000560801 TSPY1Q01534 308 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 PRPF4BQ13523 1007 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms