RNA–Protein interactions for RNA: ENST00000560716.1

APH1B-209, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-209ENST00000560716 RNPEPQ9H4A4 650 aa8.71□□□□□ -1.02
APH1B-209ENST00000560716 GPCPD1Q9NPB8 672 aa8.71□□□□□ -1.02
APH1B-209ENST00000560716 INCENPQ9NQS7 918 aa8.71□□□□□ -1.02
APH1B-209ENST00000560716 PLAGL2Q9UPG8 496 aa8.71□□□□□ -1.02
APH1B-209ENST00000560716 SQORQ9Y6N5 450 aa8.71□□□□□ -1.02
APH1B-209ENST00000560716 SALL3Q9BXA9 1300 aa8.71□□□□□ -1.02
APH1B-209ENST00000560716 FANCMQ8IYD8 2048 aa8.71□□□□□ -1.02
APH1B-209ENST00000560716 C17orf102A2RUQ5 167 aa8.7□□□□□ -1.02
APH1B-209ENST00000560716 H3BRB1 525 aa8.7□□□□□ -1.02
APH1B-209ENST00000560716 OPLAHO14841 1288 aa8.7□□□□□ -1.02
APH1B-209ENST00000560716 SMARCA5O60264 1052 aaPredicted RBP8.7□□□□□ -1.02
APH1B-209ENST00000560716 DGKIO75912 1065 aa8.7□□□□□ -1.02
APH1B-209ENST00000560716 RPLP2P05387 115 aaKnown RBP8.7□□□□□ -1.02
APH1B-209ENST00000560716 ZNF286BP0CG31 522 aa8.7□□□□□ -1.02
APH1B-209ENST00000560716 GNAT1P11488 350 aa8.7□□□□□ -1.02
APH1B-209ENST00000560716 CTNNB1P35222 781 aa8.7□□□□□ -1.02
APH1B-209ENST00000560716 RRP1P56182 461 aaKnown RBP8.7□□□□□ -1.02
APH1B-209ENST00000560716 MGAT3Q09327 533 aa8.7□□□□□ -1.02
APH1B-209ENST00000560716 KCNC3Q14003 757 aa8.7□□□□□ -1.02
APH1B-209ENST00000560716 CMTR2Q8IYT2 770 aaKnown RBP8.7□□□□□ -1.02
APH1B-209ENST00000560716 ATP6V0A1Q93050 837 aa8.7□□□□□ -1.02
APH1B-209ENST00000560716 PPP2R3CQ969Q6 453 aa8.7□□□□□ -1.02
APH1B-209ENST00000560716 MTMR8Q96EF0 704 aa8.7□□□□□ -1.02
APH1B-209ENST00000560716 KIF12Q96FN5 646 aa8.7□□□□□ -1.02
APH1B-209ENST00000560716 PDCD2LQ9BRP1 358 aa8.7□□□□□ -1.02
APH1B-209ENST00000560716 USP26Q9BXU7 913 aa8.7□□□□□ -1.02
APH1B-209ENST00000560716 IFIH1Q9BYX4 1025 aaKnown RBP8.7□□□□□ -1.02
APH1B-209ENST00000560716 TUT1Q9H6E5 874 aaKnown RBP8.7□□□□□ -1.02
APH1B-209ENST00000560716 HELLSQ9NRZ9 838 aa8.7□□□□□ -1.02
APH1B-209ENST00000560716 MRPL11Q9Y3B7 192 aaKnown RBP8.7□□□□□ -1.02
APH1B-209ENST00000560716 MRVI1Q9Y6F6 885 aa8.7□□□□□ -1.02
APH1B-209ENST00000560716 ZFHX2Q9C0A1 2572 aaPredicted RBP8.7□□□□□ -1.02
APH1B-209ENST00000560716 FRMPD4Q14CM0 1322 aa8.7□□□□□ -1.02
APH1B-209ENST00000560716 FRMPD2Q68DX3 1309 aaPredicted RBP8.7□□□□□ -1.02
APH1B-209ENST00000560716 DENND4AQ7Z401 1863 aa8.7□□□□□ -1.02
APH1B-209ENST00000560716 VPS13AQ96RL7 3174 aa8.69□□□□□ -1.02
APH1B-209ENST00000560716 ENPP3O14638 875 aa8.69□□□□□ -1.02
APH1B-209ENST00000560716 LINC01565O15544 149 aa8.69□□□□□ -1.02
APH1B-209ENST00000560716 TREHO43280 583 aa8.69□□□□□ -1.02
APH1B-209ENST00000560716 GALR2O43603 387 aaPredicted RBP8.69□□□□□ -1.02
APH1B-209ENST00000560716 STAM2O75886 525 aa8.69□□□□□ -1.02
APH1B-209ENST00000560716 GLP2RO95838 553 aa8.69□□□□□ -1.02
APH1B-209ENST00000560716 FGAP02671 866 aa8.69□□□□□ -1.02
APH1B-209ENST00000560716 SMIM10L2AP0DMW4 78 aa8.69□□□□□ -1.02
APH1B-209ENST00000560716 SMIM10L2BP0DMW5 78 aa8.69□□□□□ -1.02
APH1B-209ENST00000560716 SP2Q02086 613 aa8.69□□□□□ -1.02
APH1B-209ENST00000560716 UBE3AQ05086 875 aa8.69□□□□□ -1.02
APH1B-209ENST00000560716 CDC37Q16543 378 aaPredicted RBP8.69□□□□□ -1.02
APH1B-209ENST00000560716 PTPN21Q16825 1174 aa8.69□□□□□ -1.02
APH1B-209ENST00000560716 ASPRV1Q53RT3 343 aa8.69□□□□□ -1.02
APH1B-209ENST00000560716 CCDC178Q5BJE1 867 aa8.69□□□□□ -1.02
APH1B-209ENST00000560716 ARHGEF16Q5VV41 709 aa8.69□□□□□ -1.02
APH1B-209ENST00000560716 SPPL3Q8TCT6 385 aa8.69□□□□□ -1.02
APH1B-209ENST00000560716 RASGRP4Q8TDF6 673 aa8.69□□□□□ -1.02
APH1B-209ENST00000560716 SPATA33Q96N06 139 aa8.69□□□□□ -1.02
APH1B-209ENST00000560716 PLSCR2Q9NRY7 297 aa8.69□□□□□ -1.02
APH1B-209ENST00000560716 RIF1Q5UIP0 2472 aaKnown RBP8.69□□□□□ -1.02
APH1B-209ENST00000560716 ZNF292O60281 2723 aa8.68□□□□□ -1.02
APH1B-209ENST00000560716 PTPRZ1P23471 2315 aaPredicted RBP8.68□□□□□ -1.02
APH1B-209ENST00000560716 PRR23AA6NEV1 266 aa8.68□□□□□ -1.02
APH1B-209ENST00000560716 GGPS1O95749 300 aa8.68□□□□□ -1.02
APH1B-209ENST00000560716 CHRNA1P02708 482 aa8.68□□□□□ -1.02
APH1B-209ENST00000560716 LGALS2P05162 132 aa8.68□□□□□ -1.02
APH1B-209ENST00000560716 UBA1P22314 1058 aaKnown RBP8.68□□□□□ -1.02
APH1B-209ENST00000560716 DNAJB1P25685 340 aa8.68□□□□□ -1.02
APH1B-209ENST00000560716 GTF2F1P35269 517 aaKnown RBP eCLIP8.68□□□□□ -1.02
APH1B-209ENST00000560716 VCPP55072 806 aaKnown RBP8.68□□□□□ -1.02
APH1B-209ENST00000560716 VPS53Q5VIR6 699 aa8.68□□□□□ -1.02
APH1B-209ENST00000560716 PDE12Q6L8Q7 609 aaKnown RBP8.68□□□□□ -1.02
APH1B-209ENST00000560716 TAF2Q6P1X5 1199 aa8.68□□□□□ -1.02
APH1B-209ENST00000560716 CHST3Q7LGC8 479 aa8.68□□□□□ -1.02
APH1B-209ENST00000560716 ADGRF4Q8IZF3 695 aa8.68□□□□□ -1.02
APH1B-209ENST00000560716 RIPOR3Q96MK2 946 aa8.68□□□□□ -1.02
APH1B-209ENST00000560716 CDCA3Q99618 268 aaPredicted RBP8.68□□□□□ -1.02
APH1B-209ENST00000560716 FSD1Q9BTV5 496 aa8.68□□□□□ -1.02
APH1B-209ENST00000560716 NRCAMQ92823 1304 aa8.68□□□□□ -1.02
APH1B-209ENST00000560716 MBLAC1A4D2B0 266 aaPredicted RBP8.67□□□□□ -1.02
APH1B-209ENST00000560716 PPP1R37O75864 691 aa8.67□□□□□ -1.02
APH1B-209ENST00000560716 UPP2O95045 317 aa8.67□□□□□ -1.02
APH1B-209ENST00000560716 ITGB1P05556 798 aa8.67□□□□□ -1.02
APH1B-209ENST00000560716 NDUFV1P49821 464 aa8.67□□□□□ -1.02
APH1B-209ENST00000560716 CHMP4BP1P59074 171 aa8.67□□□□□ -1.02
APH1B-209ENST00000560716 PGM5Q15124 567 aa8.67□□□□□ -1.02
APH1B-209ENST00000560716 QRICH1Q2TAL8 776 aa8.67□□□□□ -1.02
APH1B-209ENST00000560716 USH1GQ495M9 461 aa8.67□□□□□ -1.02
APH1B-209ENST00000560716 CCDC171Q6TFL3 1326 aa8.67□□□□□ -1.02
APH1B-209ENST00000560716 METTL7BQ6UX53 244 aa8.67□□□□□ -1.02
APH1B-209ENST00000560716 ASCL5Q7RTU5 278 aa8.67□□□□□ -1.02
APH1B-209ENST00000560716 UBALD2Q8IYN6 164 aa8.67□□□□□ -1.02
APH1B-209ENST00000560716 CHMP4CQ96CF2 233 aa8.67□□□□□ -1.02
APH1B-209ENST00000560716 INPP4AQ96PE3 977 aaPredicted RBP8.67□□□□□ -1.02
APH1B-209ENST00000560716 SENP7Q9BQF6 1050 aa8.67□□□□□ -1.02
APH1B-209ENST00000560716 FTHL17Q9BXU8 183 aa8.67□□□□□ -1.02
APH1B-209ENST00000560716 JMJD4Q9H9V9 463 aa8.67□□□□□ -1.02
APH1B-209ENST00000560716 RYDENQ9NUL5 291 aaKnown RBP8.67□□□□□ -1.02
APH1B-209ENST00000560716 USP15Q9Y4E8 981 aaPredicted RBP8.67□□□□□ -1.02
APH1B-209ENST00000560716 SPATA31C2B4DYI2 1134 aa8.66□□□□□ -1.02
APH1B-209ENST00000560716 EIF2AK2P19525 551 aaKnown RBP8.66□□□□□ -1.02
APH1B-209ENST00000560716 TRAF1Q13077 416 aa8.66□□□□□ -1.02
APH1B-209ENST00000560716 BTG3Q14201 252 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms