RNA–Protein interactions for RNA: ENST00000560673.1

KNSTRN-211, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-211ENST00000560673 LAMC2Q13753 1193 aa13.4□□□□□ -0.26
KNSTRN-211ENST00000560673 KCNC3Q14003 757 aa13.4□□□□□ -0.26
KNSTRN-211ENST00000560673 SLFNL1Q499Z3 407 aa13.4□□□□□ -0.26
KNSTRN-211ENST00000560673 TPRNQ4KMQ1 711 aa13.4□□□□□ -0.26
KNSTRN-211ENST00000560673 SBK1Q52WX2 424 aa13.4□□□□□ -0.26
KNSTRN-211ENST00000560673 PPM1JQ5JR12 505 aa13.4□□□□□ -0.26
KNSTRN-211ENST00000560673 PDE12Q6L8Q7 609 aaKnown RBP13.4□□□□□ -0.26
KNSTRN-211ENST00000560673 B4GALNT3Q6L9W6 998 aa13.4□□□□□ -0.26
KNSTRN-211ENST00000560673 LLGL2Q6P1M3 1020 aa13.4□□□□□ -0.26
KNSTRN-211ENST00000560673 AACSQ86V21 672 aa13.4□□□□□ -0.26
KNSTRN-211ENST00000560673 SSH3Q8TE77 659 aa13.4□□□□□ -0.26
KNSTRN-211ENST00000560673 SECISBP2LQ93073 1101 aaKnown RBP13.4□□□□□ -0.26
KNSTRN-211ENST00000560673 RANBP17Q9H2T7 1088 aaKnown RBP13.4□□□□□ -0.26
KNSTRN-211ENST00000560673 CDH22Q9UJ99 828 aa13.4□□□□□ -0.26
KNSTRN-211ENST00000560673 SOBPA7XYQ1 873 aa13.39□□□□□ -0.27
KNSTRN-211ENST00000560673 MINDY4BA8MYZ0 360 aa13.39□□□□□ -0.27
KNSTRN-211ENST00000560673 TREHO43280 583 aa13.39□□□□□ -0.27
KNSTRN-211ENST00000560673 PPFIA4O75335 1185 aa13.39□□□□□ -0.27
KNSTRN-211ENST00000560673 PRDM1O75626 825 aa13.39□□□□□ -0.27
KNSTRN-211ENST00000560673 BCAR3O75815 825 aa13.39□□□□□ -0.27
KNSTRN-211ENST00000560673 RFX1P22670 979 aa13.39□□□□□ -0.27
KNSTRN-211ENST00000560673 ITIH3Q06033 890 aa13.39□□□□□ -0.27
KNSTRN-211ENST00000560673 TRMT2AQ8IZ69 625 aaKnown RBP13.39□□□□□ -0.27
KNSTRN-211ENST00000560673 RASGRP4Q8TDF6 673 aa13.39□□□□□ -0.27
KNSTRN-211ENST00000560673 CLEC4DQ8WXI8 215 aa13.39□□□□□ -0.27
KNSTRN-211ENST00000560673 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.39□□□□□ -0.271e-6■■■■□ 21.2
KNSTRN-211ENST00000560673 ADAM7Q9H2U9 754 aa13.39□□□□□ -0.27
KNSTRN-211ENST00000560673 ANGPTL2Q9UKU9 493 aa13.39□□□□□ -0.27
KNSTRN-211ENST00000560673 NOP58Q9Y2X3 529 aaKnown RBP13.39□□□□□ -0.27
KNSTRN-211ENST00000560673 TSPY3P0CV98 308 aa13.38□□□□□ -0.27
KNSTRN-211ENST00000560673 TSPY8P0CW00 308 aa13.38□□□□□ -0.27
KNSTRN-211ENST00000560673 MTHFRP42898 656 aa13.38□□□□□ -0.27
KNSTRN-211ENST00000560673 TDGQ13569 410 aa13.38□□□□□ -0.27
KNSTRN-211ENST00000560673 PAN2Q504Q3 1202 aaKnown RBP13.38□□□□□ -0.27
KNSTRN-211ENST00000560673 CRIPAKQ8N1N5 446 aa13.38□□□□□ -0.27
KNSTRN-211ENST00000560673 DDX41Q9UJV9 622 aaKnown RBP13.38□□□□□ -0.27
KNSTRN-211ENST00000560673 PCDHB12Q9Y5F1 795 aa13.38□□□□□ -0.27
KNSTRN-211ENST00000560673 TTC3P53804 2025 aa13.38□□□□□ -0.27
KNSTRN-211ENST00000560673 FANCMQ8IYD8 2048 aa13.37□□□□□ -0.27
KNSTRN-211ENST00000560673 GHRP10912 638 aa13.37□□□□□ -0.27
KNSTRN-211ENST00000560673 HOXD8P13378 290 aaPredicted RBP13.37□□□□□ -0.27
KNSTRN-211ENST00000560673 HOXC8P31273 242 aa13.37□□□□□ -0.27
KNSTRN-211ENST00000560673 ERVFC1P60507 584 aa13.37□□□□□ -0.27
KNSTRN-211ENST00000560673 ATP8B2P98198 1209 aa13.37□□□□□ -0.27
KNSTRN-211ENST00000560673 TBC1D8BQ0IIM8 1120 aa13.37□□□□□ -0.27
KNSTRN-211ENST00000560673 FAM26DQ5JW98 314 aa13.37□□□□□ -0.27
KNSTRN-211ENST00000560673 CASP10Q92851 521 aa13.37□□□□□ -0.27
KNSTRN-211ENST00000560673 BORCS6Q96GS4 357 aa13.37□□□□□ -0.27
KNSTRN-211ENST00000560673 PNMA2Q9UL42 364 aa13.37□□□□□ -0.27
KNSTRN-211ENST00000560673 USP18Q9UMW8 372 aa13.37□□□□□ -0.27
KNSTRN-211ENST00000560673 DUSP12Q9UNI6 340 aa13.37□□□□□ -0.27
KNSTRN-211ENST00000560673 USTQ9Y2C2 406 aa13.37□□□□□ -0.27
KNSTRN-211ENST00000560673 PLIN4Q96Q06 1357 aa13.36□□□□□ -0.27
KNSTRN-211ENST00000560673 SMIM10L2AP0DMW4 78 aa13.36□□□□□ -0.27
KNSTRN-211ENST00000560673 SMIM10L2BP0DMW5 78 aa13.36□□□□□ -0.27
KNSTRN-211ENST00000560673 GNAT1P11488 350 aa13.36□□□□□ -0.27
KNSTRN-211ENST00000560673 RARSP54136 660 aaKnown RBP13.36□□□□□ -0.27
KNSTRN-211ENST00000560673 STXBP2Q15833 593 aa13.36□□□□□ -0.27
KNSTRN-211ENST00000560673 C1orf210Q8IVY1 113 aa13.36□□□□□ -0.27
KNSTRN-211ENST00000560673 NEDD1Q8NHV4 660 aa13.36□□□□□ -0.27
KNSTRN-211ENST00000560673 ARHGAP45Q92619 1136 aa13.36□□□□□ -0.27
KNSTRN-211ENST00000560673 CYP26B1Q9NR63 512 aa13.36□□□□□ -0.27
KNSTRN-211ENST00000560673 AAASQ9NRG9 546 aa13.36□□□□□ -0.27
KNSTRN-211ENST00000560673 DBR1Q9UK59 544 aaKnown RBP13.36□□□□□ -0.27
KNSTRN-211ENST00000560673 MRVI1Q9Y6F6 885 aa13.36□□□□□ -0.27
KNSTRN-211ENST00000560673 KIAA1671Q9BY89 1806 aa13.36□□□□□ -0.27
KNSTRN-211ENST00000560673 PLXNA4Q9HCM2 1894 aa13.36□□□□□ -0.27
KNSTRN-211ENST00000560673 MYH7BA7E2Y1 1941 aa13.35□□□□□ -0.27
KNSTRN-211ENST00000560673 NBEAQ8NFP9 2946 aa13.35□□□□□ -0.27
KNSTRN-211ENST00000560673 CNOT1A5YKK6 2376 aaKnown RBP13.35□□□□□ -0.27
KNSTRN-211ENST00000560673 FSCN2O14926 492 aa13.35□□□□□ -0.27
KNSTRN-211ENST00000560673 FGF18O76093 207 aa13.35□□□□□ -0.27
KNSTRN-211ENST00000560673 SLC16A2P36021 539 aa13.35□□□□□ -0.27
KNSTRN-211ENST00000560673 UBE3CQ15386 1083 aa13.35□□□□□ -0.27
KNSTRN-211ENST00000560673 CCDC96Q2M329 555 aa13.35□□□□□ -0.27
KNSTRN-211ENST00000560673 SPECC1Q5M775 1068 aa13.35□□□□□ -0.27
KNSTRN-211ENST00000560673 PPP4R3BQ5MIZ7 849 aa13.35□□□□□ -0.27
KNSTRN-211ENST00000560673 SPOUT1Q5T280 376 aaKnown RBP13.35□□□□□ -0.27
KNSTRN-211ENST00000560673 PLPP4Q5VZY2 271 aa13.35□□□□□ -0.27
KNSTRN-211ENST00000560673 RUFY4Q6ZNE9 571 aa13.35□□□□□ -0.27
KNSTRN-211ENST00000560673 NPAS4Q8IUM7 802 aa13.35□□□□□ -0.27
KNSTRN-211ENST00000560673 SPATA33Q96N06 139 aa13.35□□□□□ -0.27
KNSTRN-211ENST00000560673 C16orf70Q9BSU1 422 aa13.35□□□□□ -0.27
KNSTRN-211ENST00000560673 RNPEPQ9H4A4 650 aa13.35□□□□□ -0.27
KNSTRN-211ENST00000560673 TMEM260Q9NX78 707 aa13.35□□□□□ -0.27
KNSTRN-211ENST00000560673 MTMR7Q9Y216 660 aa13.35□□□□□ -0.27
KNSTRN-211ENST00000560673 H3BRB1 525 aa13.34□□□□□ -0.27
KNSTRN-211ENST00000560673 SPTLC1O15269 473 aa13.34□□□□□ -0.27
KNSTRN-211ENST00000560673 ABCB7O75027 752 aa13.34□□□□□ -0.27
KNSTRN-211ENST00000560673 EOMESO95936 686 aa13.34□□□□□ -0.27
KNSTRN-211ENST00000560673 CHRNA1P02708 482 aa13.34□□□□□ -0.27
KNSTRN-211ENST00000560673 STAG3L1P0CL83 205 aa13.34□□□□□ -0.27
KNSTRN-211ENST00000560673 SYDE2Q5VT97 1194 aa13.34□□□□□ -0.27
KNSTRN-211ENST00000560673 GIMAP6Q6P9H5 292 aa13.34□□□□□ -0.27
KNSTRN-211ENST00000560673 RASGRP2Q7LDG7 609 aa13.34□□□□□ -0.27
KNSTRN-211ENST00000560673 NSUN6Q8TEA1 469 aaKnown RBP13.34□□□□□ -0.27
KNSTRN-211ENST00000560673 PUS7LQ9H0K6 701 aaKnown RBP13.34□□□□□ -0.27
KNSTRN-211ENST00000560673 TUT1Q9H6E5 874 aaKnown RBP13.34□□□□□ -0.27
KNSTRN-211ENST00000560673 EHMT1Q9H9B1 1298 aa13.34□□□□□ -0.27
KNSTRN-211ENST00000560673 PAG1Q9NWQ8 432 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms