RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 SETD4Q9NVD3 440 aa12.15□□□□□ -0.46
CDC42BPB-207ENST00000560492 ZNF215Q9UL58 517 aaPredicted RBP12.15□□□□□ -0.46
CDC42BPB-207ENST00000560492 MYO7AQ13402 2215 aa12.14□□□□□ -0.47
CDC42BPB-207ENST00000560492 OPLAHO14841 1288 aa12.14□□□□□ -0.47
CDC42BPB-207ENST00000560492 RGS20O76081 388 aa12.14□□□□□ -0.47
CDC42BPB-207ENST00000560492 TGFB3P10600 412 aa12.14□□□□□ -0.47
CDC42BPB-207ENST00000560492 HOXD8P13378 290 aaPredicted RBP12.14□□□□□ -0.47
CDC42BPB-207ENST00000560492 ZP2Q05996 745 aa12.14□□□□□ -0.47
CDC42BPB-207ENST00000560492 TRAF1Q13077 416 aa12.14□□□□□ -0.47
CDC42BPB-207ENST00000560492 STOX1Q6ZVD7 989 aa12.14□□□□□ -0.47
CDC42BPB-207ENST00000560492 CYFIP1Q7L576 1253 aa12.14□□□□□ -0.47
CDC42BPB-207ENST00000560492 VSIG10LQ86VR7 867 aa12.14□□□□□ -0.47
CDC42BPB-207ENST00000560492 TICAM2Q86XR7 235 aa12.14□□□□□ -0.47
CDC42BPB-207ENST00000560492 TRIM50Q86XT4 487 aa12.14□□□□□ -0.47
CDC42BPB-207ENST00000560492 APBB2Q92870 758 aa12.14□□□□□ -0.47
CDC42BPB-207ENST00000560492 POP1Q99575 1024 aaKnown RBP12.14□□□□□ -0.47
CDC42BPB-207ENST00000560492 C11orf84Q9BUA3 381 aaPredicted RBP12.14□□□□□ -0.47
CDC42BPB-207ENST00000560492 MAP3K20Q9NYL2 800 aaKnown RBP12.14□□□□□ -0.47
CDC42BPB-207ENST00000560492 PRKAG3Q9UGI9 489 aa12.14□□□□□ -0.47
CDC42BPB-207ENST00000560492 ERICH2A1L162 156 aa12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 HIP1O00291 1037 aa12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 PPP1R11O60927 126 aaPredicted RBP12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 CAND2O75155 1236 aa12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 GHRP10912 638 aa12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 IBSPP21815 317 aaPredicted RBP12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 RRP1P56182 461 aaKnown RBP12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 TRDNQ13061 729 aa12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 NEDD9Q14511 834 aa12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 ADHFE1Q8IWW8 467 aa12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 SPOCK2Q92563 424 aa12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 ANKS1AQ92625 1134 aa12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 FBXL18Q96ME1 805 aa12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 PIGSQ96S52 555 aa12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 USP26Q9BXU7 913 aa12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 OSBPL7Q9BZF2 842 aa12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 RTEL1Q9NZ71 1219 aa12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 KIAA1671Q9BY89 1806 aa12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 C5orf42Q9H799 3197 aa12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 LOXHD1Q8IVV2 1947 aa12.13□□□□□ -0.47
CDC42BPB-207ENST00000560492 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.12□□□□□ -0.47
CDC42BPB-207ENST00000560492 NCK2O43639 380 aa12.12□□□□□ -0.47
CDC42BPB-207ENST00000560492 IRS1P35568 1242 aa12.12□□□□□ -0.47
CDC42BPB-207ENST00000560492 NDUFV1P49821 464 aa12.12□□□□□ -0.47
CDC42BPB-207ENST00000560492 NHLH1Q02575 133 aa12.12□□□□□ -0.47
CDC42BPB-207ENST00000560492 BTG3Q14201 252 aaPredicted RBP12.12□□□□□ -0.47
CDC42BPB-207ENST00000560492 RSPH3Q86UC2 560 aa12.12□□□□□ -0.47
CDC42BPB-207ENST00000560492 SAMD3Q8N6K7 520 aa12.12□□□□□ -0.47
CDC42BPB-207ENST00000560492 CUL5Q93034 780 aa12.12□□□□□ -0.47
CDC42BPB-207ENST00000560492 BCAS3Q9H6U6 928 aa12.12□□□□□ -0.47
CDC42BPB-207ENST00000560492 MAD2L2Q9UI95 211 aa12.12□□□□□ -0.47
CDC42BPB-207ENST00000560492 MUTYHQ9UIF7 546 aa12.12□□□□□ -0.47
CDC42BPB-207ENST00000560492 RWDD3Q9Y3V2 267 aa12.12□□□□□ -0.47
CDC42BPB-207ENST00000560492 ADGRA3Q8IWK6 1321 aa12.11□□□□□ -0.47
CDC42BPB-207ENST00000560492 COL4A6Q14031 1691 aa12.11□□□□□ -0.47
CDC42BPB-207ENST00000560492 GRM6O15303 877 aa12.11□□□□□ -0.47
CDC42BPB-207ENST00000560492 FIBPO43427 364 aa12.11□□□□□ -0.47
CDC42BPB-207ENST00000560492 HDAC1Q13547 482 aaPredicted RBP12.11□□□□□ -0.47
CDC42BPB-207ENST00000560492 METTL7BQ6UX53 244 aa12.11□□□□□ -0.47
CDC42BPB-207ENST00000560492 HFE2Q6ZVN8 426 aa12.11□□□□□ -0.47
CDC42BPB-207ENST00000560492 PDCD7Q8N8D1 485 aaKnown RBP12.11□□□□□ -0.47
CDC42BPB-207ENST00000560492 SMARCC2Q8TAQ2 1214 aa12.11□□□□□ -0.47
CDC42BPB-207ENST00000560492 LMBR1Q8WVP7 490 aa12.11□□□□□ -0.47
CDC42BPB-207ENST00000560492 PPP2R3CQ969Q6 453 aa12.11□□□□□ -0.47
CDC42BPB-207ENST00000560492 MFSD14AQ96MC6 490 aa12.11□□□□□ -0.47
CDC42BPB-207ENST00000560492 GPR20Q99678 358 aa12.11□□□□□ -0.47
CDC42BPB-207ENST00000560492 DSCC1Q9BVC3 393 aa12.11□□□□□ -0.47
CDC42BPB-207ENST00000560492 LMAN2LQ9H0V9 348 aa12.11□□□□□ -0.47
CDC42BPB-207ENST00000560492 SUPT16HQ9Y5B9 1047 aaKnown RBP12.11□□□□□ -0.47
CDC42BPB-207ENST00000560492 STXBP3O00186 592 aa12.1□□□□□ -0.47
CDC42BPB-207ENST00000560492 IFIT3O14879 490 aaKnown RBP12.1□□□□□ -0.47
CDC42BPB-207ENST00000560492 MBTPS2O43462 519 aa12.1□□□□□ -0.47
CDC42BPB-207ENST00000560492 STAM2O75886 525 aa12.1□□□□□ -0.47
CDC42BPB-207ENST00000560492 RB1P06400 928 aa12.1□□□□□ -0.47
CDC42BPB-207ENST00000560492 MARK3P27448 753 aa12.1□□□□□ -0.47
CDC42BPB-207ENST00000560492 BMPR1AP36894 532 aa12.1□□□□□ -0.47
CDC42BPB-207ENST00000560492 IGBP1P78318 339 aa12.1□□□□□ -0.47
CDC42BPB-207ENST00000560492 GHRHRQ02643 423 aa12.1□□□□□ -0.47
CDC42BPB-207ENST00000560492 HYAL1Q12794 435 aa12.1□□□□□ -0.47
CDC42BPB-207ENST00000560492 CYB5R4Q7L1T6 521 aa12.1□□□□□ -0.47
CDC42BPB-207ENST00000560492 RALYLQ86SE5 291 aaKnown RBP12.1□□□□□ -0.47
CDC42BPB-207ENST00000560492 ALG13Q9NP73 1137 aaKnown RBP12.1□□□□□ -0.47
CDC42BPB-207ENST00000560492 CD207Q9UJ71 328 aa12.1□□□□□ -0.47
CDC42BPB-207ENST00000560492 WDFY4Q6ZS81 3184 aa12.1□□□□□ -0.47
CDC42BPB-207ENST00000560492 PNMA6FA0A0J9YX94 578 aa12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 POTEB3A0JP26 581 aa12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 PALM3A6NDB9 673 aaPredicted RBP12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 HOXC8P31273 242 aa12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 GTF2F1P35269 517 aaKnown RBP eCLIP12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 PSEN1P49768 467 aa12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 MRPS9P82933 396 aaKnown RBP12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 DLX2Q07687 328 aaPredicted RBP12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 PPFIA1Q13136 1202 aa12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 SMAD4Q13485 552 aaKnown RBP12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 GRM4Q14833 912 aa12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 WTAPQ15007 396 aa12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 SART3Q15020 963 aaKnown RBP12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 PAN2Q504Q3 1202 aaKnown RBP12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 POTEBQ6S5H4 581 aa12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 RUFY4Q6ZNE9 571 aa12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 NLRX1Q86UT6 975 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms