RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 ADCY7P51828 1080 aa16.84■□□□□ 0.29
IDH3A-219ENST00000560414 CCT2P78371 535 aaKnown RBP16.84■□□□□ 0.29
IDH3A-219ENST00000560414 ZNF200P98182 395 aaPredicted RBP16.84■□□□□ 0.29
IDH3A-219ENST00000560414 ZNF697Q5TEC3 545 aa16.84■□□□□ 0.29
IDH3A-219ENST00000560414 PPP1R18Q6NYC8 613 aa16.84■□□□□ 0.29
IDH3A-219ENST00000560414 DEFB128Q7Z7B8 93 aa16.84■□□□□ 0.29
IDH3A-219ENST00000560414 RPUSD2Q8IZ73 545 aaKnown RBP16.84■□□□□ 0.29
IDH3A-219ENST00000560414 HERVK_113Q902F9 699 aa16.84■□□□□ 0.29
IDH3A-219ENST00000560414 GPR20Q99678 358 aa16.84■□□□□ 0.29
IDH3A-219ENST00000560414 UPF3BQ9BZI7 483 aaKnown RBP16.84■□□□□ 0.29
IDH3A-219ENST00000560414 TMEM260Q9NX78 707 aa16.84■□□□□ 0.29
IDH3A-219ENST00000560414 PKD2L1Q9P0L9 805 aa16.84■□□□□ 0.29
IDH3A-219ENST00000560414 UBIAD1Q9Y5Z9 338 aa16.84■□□□□ 0.29
IDH3A-219ENST00000560414 LGALS2P05162 132 aa16.83■□□□□ 0.28
IDH3A-219ENST00000560414 IQCF3P0C7M6 154 aa16.83■□□□□ 0.28
IDH3A-219ENST00000560414 PDIA3P30101 505 aaKnown RBP16.83■□□□□ 0.28
IDH3A-219ENST00000560414 BFSP2Q13515 415 aa16.83■□□□□ 0.28
IDH3A-219ENST00000560414 TOB2Q14106 344 aaPredicted RBP16.83■□□□□ 0.28
IDH3A-219ENST00000560414 HIC1Q14526 733 aa16.83■□□□□ 0.28
IDH3A-219ENST00000560414 PKN1Q16512 942 aa16.83■□□□□ 0.28
IDH3A-219ENST00000560414 PFKFB3Q16875 520 aaPredicted RBP16.83■□□□□ 0.28
IDH3A-219ENST00000560414 RETREG2Q8NC44 543 aa16.83■□□□□ 0.28
IDH3A-219ENST00000560414 DHX38Q92620 1227 aaKnown RBP16.83■□□□□ 0.28
IDH3A-219ENST00000560414 PHKBQ93100 1093 aa16.83■□□□□ 0.28
IDH3A-219ENST00000560414 GPRASP2Q96D09 838 aa16.83■□□□□ 0.28
IDH3A-219ENST00000560414 SENP7Q9BQF6 1050 aa16.83■□□□□ 0.28
IDH3A-219ENST00000560414 TTYH1Q9H313 450 aaPredicted RBP16.83■□□□□ 0.28
IDH3A-219ENST00000560414 DOCK5Q9H7D0 1870 aa16.83■□□□□ 0.28
IDH3A-219ENST00000560414 NCOA5Q9HCD5 579 aaKnown RBP16.83■□□□□ 0.28
IDH3A-219ENST00000560414 CYP46A1Q9Y6A2 500 aa16.83■□□□□ 0.28
IDH3A-219ENST00000560414 NID2Q14112 1375 aa16.82■□□□□ 0.28
IDH3A-219ENST00000560414 H3BRB1 525 aa16.82■□□□□ 0.28
IDH3A-219ENST00000560414 hCG_1984214I3L0E3 225 aa16.82■□□□□ 0.28
IDH3A-219ENST00000560414 ADAMTS3O15072 1205 aa16.82■□□□□ 0.28
IDH3A-219ENST00000560414 SCG2P13521 617 aa16.82■□□□□ 0.28
IDH3A-219ENST00000560414 KCNA2P16389 499 aa16.82■□□□□ 0.28
IDH3A-219ENST00000560414 PBX2P40425 430 aa16.82■□□□□ 0.28
IDH3A-219ENST00000560414 NTRK3Q16288 839 aa16.82■□□□□ 0.28
IDH3A-219ENST00000560414 UTP14CQ5TAP6 766 aaKnown RBP16.82■□□□□ 0.28
IDH3A-219ENST00000560414 TRIM50Q86XT4 487 aa16.82■□□□□ 0.28
IDH3A-219ENST00000560414 ZNF713Q8N859 430 aaPredicted RBP16.82■□□□□ 0.28
IDH3A-219ENST00000560414 CYP2W1Q8TAV3 490 aa16.82■□□□□ 0.28
IDH3A-219ENST00000560414 GUCD1Q96NT3 240 aa16.82■□□□□ 0.28
IDH3A-219ENST00000560414 ANO3Q9BYT9 981 aa16.82■□□□□ 0.28
IDH3A-219ENST00000560414 SEMA6BQ9H3T3 888 aa16.82■□□□□ 0.28
IDH3A-219ENST00000560414 TUT1Q9H6E5 874 aaKnown RBP16.82■□□□□ 0.28
IDH3A-219ENST00000560414 JADE2Q9NQC1 790 aa16.82■□□□□ 0.28
IDH3A-219ENST00000560414 SCN5AQ14524 2016 aa16.81■□□□□ 0.28
IDH3A-219ENST00000560414 TRIP12Q14669 1992 aaPredicted RBP16.81■□□□□ 0.28
IDH3A-219ENST00000560414 PRPF3O43395 683 aaKnown RBP16.81■□□□□ 0.28
IDH3A-219ENST00000560414 DNAJB2P25686 324 aa16.81■□□□□ 0.28
IDH3A-219ENST00000560414 EVCP57679 992 aa16.81■□□□□ 0.28
IDH3A-219ENST00000560414 MTMR1Q13613 665 aa16.81■□□□□ 0.28
IDH3A-219ENST00000560414 JAKMIP3Q5VZ66 844 aa16.81■□□□□ 0.28
IDH3A-219ENST00000560414 WNT8BQ93098 351 aa16.81■□□□□ 0.28
IDH3A-219ENST00000560414 SLC26A6Q9BXS9 759 aa16.81■□□□□ 0.28
IDH3A-219ENST00000560414 TM6SF1Q9BZW5 370 aa16.81■□□□□ 0.28
IDH3A-219ENST00000560414 EHMT1Q9H9B1 1298 aa16.81■□□□□ 0.28
IDH3A-219ENST00000560414 ZBBXA8MT70 800 aa16.8■□□□□ 0.28
IDH3A-219ENST00000560414 FOSP01100 380 aaPredicted RBP16.8■□□□□ 0.28
IDH3A-219ENST00000560414 CLK2P49760 499 aaKnown RBP16.8■□□□□ 0.28
IDH3A-219ENST00000560414 GIMAP8Q8ND71 665 aaPredicted RBP16.8■□□□□ 0.28
IDH3A-219ENST00000560414 CAGE1Q8TC20 777 aa16.8■□□□□ 0.28
IDH3A-219ENST00000560414 CDHR1Q96JP9 859 aa16.8■□□□□ 0.28
IDH3A-219ENST00000560414 MXRA8Q9BRK3 442 aa16.8■□□□□ 0.28
IDH3A-219ENST00000560414 PBX4Q9BYU1 374 aa16.8■□□□□ 0.28
IDH3A-219ENST00000560414 FTOQ9C0B1 505 aaKnown RBP eCLIP16.8■□□□□ 0.28
IDH3A-219ENST00000560414 MTIF3Q9H2K0 278 aaKnown RBP16.8■□□□□ 0.28
IDH3A-219ENST00000560414 CDH23Q9H251 3354 aa16.8■□□□□ 0.28
IDH3A-219ENST00000560414 PFKMP08237 780 aa16.79■□□□□ 0.28
IDH3A-219ENST00000560414 SMIM10L2AP0DMW4 78 aa16.79■□□□□ 0.28
IDH3A-219ENST00000560414 SMIM10L2BP0DMW5 78 aa16.79■□□□□ 0.28
IDH3A-219ENST00000560414 CKBP12277 381 aa16.79■□□□□ 0.28
IDH3A-219ENST00000560414 IFNAR1P17181 557 aa16.79■□□□□ 0.28
IDH3A-219ENST00000560414 RFC2P35250 354 aa16.79■□□□□ 0.28
IDH3A-219ENST00000560414 AKAP17AQ02040 695 aaKnown RBP16.79■□□□□ 0.28
IDH3A-219ENST00000560414 PTK7Q13308 1070 aa16.79■□□□□ 0.28
IDH3A-219ENST00000560414 GPNMBQ14956 572 aa16.79■□□□□ 0.28
IDH3A-219ENST00000560414 GPIHBP1Q8IV16 184 aa16.79■□□□□ 0.28
IDH3A-219ENST00000560414 CCDC155Q8N6L0 562 aa16.79■□□□□ 0.28
IDH3A-219ENST00000560414 AFAP1L1Q8TED9 768 aa16.79■□□□□ 0.28
IDH3A-219ENST00000560414 CDX2Q99626 313 aaPredicted RBP16.79■□□□□ 0.28
IDH3A-219ENST00000560414 GLT8D2Q9H1C3 349 aa16.79■□□□□ 0.28
IDH3A-219ENST00000560414 RNPEPQ9H4A4 650 aa16.79■□□□□ 0.28
IDH3A-219ENST00000560414 KCNH7Q9NS40 1196 aa16.79■□□□□ 0.28
IDH3A-219ENST00000560414 PDRG1Q9NUG6 133 aa16.79■□□□□ 0.28
IDH3A-219ENST00000560414 STXBP5LQ9Y2K9 1186 aa16.79■□□□□ 0.28
IDH3A-219ENST00000560414 TET1Q8NFU7 2136 aa16.78■□□□□ 0.28
IDH3A-219ENST00000560414 GSTTP1A0A1W2PQM5 241 aa16.78■□□□□ 0.28
IDH3A-219ENST00000560414 C17orf102A2RUQ5 167 aa16.78■□□□□ 0.28
IDH3A-219ENST00000560414 ARP10275 920 aa16.78■□□□□ 0.28
IDH3A-219ENST00000560414 SELPP16109 830 aa16.78■□□□□ 0.28
IDH3A-219ENST00000560414 TCF7P36402 384 aaPredicted RBP16.78■□□□□ 0.28
IDH3A-219ENST00000560414 SREBF1P36956 1147 aa16.78■□□□□ 0.28
IDH3A-219ENST00000560414 STK3Q13188 491 aa16.78■□□□□ 0.28
IDH3A-219ENST00000560414 AP3B2Q13367 1082 aa16.78■□□□□ 0.28
IDH3A-219ENST00000560414 TRIM71Q2Q1W2 868 aaKnown RBP16.78■□□□□ 0.28
IDH3A-219ENST00000560414 LRRC8DQ7L1W4 858 aa16.78■□□□□ 0.28
IDH3A-219ENST00000560414 TEX2Q8IWB9 1127 aa16.78■□□□□ 0.28
IDH3A-219ENST00000560414 ATP6V0A1Q93050 837 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms