RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 FGD1P98174 961 aa23.58■■□□□ 1.37
PSEN1-225ENST00000560005 CELF3Q5SZQ8 465 aaKnown RBP23.58■■□□□ 1.37
PSEN1-225ENST00000560005 FBXL16Q8N461 479 aa23.58■■□□□ 1.37
PSEN1-225ENST00000560005 PNMA1Q8ND90 353 aa23.58■■□□□ 1.37
PSEN1-225ENST00000560005 SNX27Q96L92 541 aa23.58■■□□□ 1.37
PSEN1-225ENST00000560005 C16orf70Q9BSU1 422 aa23.58■■□□□ 1.37
PSEN1-225ENST00000560005 IFIH1Q9BYX4 1025 aaKnown RBP23.58■■□□□ 1.37
PSEN1-225ENST00000560005 KRT23Q9C075 422 aa23.58■■□□□ 1.37
PSEN1-225ENST00000560005 MUTYHQ9UIF7 546 aa23.58■■□□□ 1.37
PSEN1-225ENST00000560005 USP34Q70CQ2 3546 aa23.58■■□□□ 1.36
PSEN1-225ENST00000560005 DHX16O60231 1041 aaKnown RBP23.57■■□□□ 1.36
PSEN1-225ENST00000560005 RGS20O76081 388 aa23.57■■□□□ 1.36
PSEN1-225ENST00000560005 GGPS1O95749 300 aa23.57■■□□□ 1.36
PSEN1-225ENST00000560005 MYCLP12524 364 aaPredicted RBP23.57■■□□□ 1.36
PSEN1-225ENST00000560005 CUL4AQ13619 759 aa23.57■■□□□ 1.36
PSEN1-225ENST00000560005 DGKHQ86XP1 1220 aa23.57■■□□□ 1.36
PSEN1-225ENST00000560005 ESR2Q92731 530 aa23.57■■□□□ 1.36
PSEN1-225ENST00000560005 MYH6P13533 1939 aa23.57■■□□□ 1.36
PSEN1-225ENST00000560005 NEDD4P46934 1319 aa23.57■■□□□ 1.36
PSEN1-225ENST00000560005 RALGAPA2Q2PPJ7 1873 aa23.56■■□□□ 1.36
PSEN1-225ENST00000560005 TREHO43280 583 aa23.56■■□□□ 1.36
PSEN1-225ENST00000560005 NCK2O43639 380 aa23.56■■□□□ 1.36
PSEN1-225ENST00000560005 CTNNB1P35222 781 aa23.56■■□□□ 1.36
PSEN1-225ENST00000560005 EXOSC10Q01780 885 aaKnown RBP23.56■■□□□ 1.36
PSEN1-225ENST00000560005 DLX2Q07687 328 aaPredicted RBP23.56■■□□□ 1.36
PSEN1-225ENST00000560005 SMAD2Q15796 467 aaKnown RBP23.56■■□□□ 1.36
PSEN1-225ENST00000560005 STOX1Q6ZVD7 989 aa23.56■■□□□ 1.36
PSEN1-225ENST00000560005 PDCD2LQ9BRP1 358 aa23.56■■□□□ 1.36
PSEN1-225ENST00000560005 VAT1LQ9HCJ6 419 aa23.56■■□□□ 1.36
PSEN1-225ENST00000560005 ATG2AQ2TAZ0 1938 aa23.56■■□□□ 1.36
PSEN1-225ENST00000560005 SMIM10L2AP0DMW4 78 aa23.55■■□□□ 1.36
PSEN1-225ENST00000560005 SMIM10L2BP0DMW5 78 aa23.55■■□□□ 1.36
PSEN1-225ENST00000560005 UBA1P22314 1058 aaKnown RBP23.55■■□□□ 1.36
PSEN1-225ENST00000560005 HOXC8P31273 242 aa23.55■■□□□ 1.36
PSEN1-225ENST00000560005 CTC1Q2NKJ3 1217 aa23.55■■□□□ 1.36
PSEN1-225ENST00000560005 HERC4Q5GLZ8 1057 aaPredicted RBP23.55■■□□□ 1.36
PSEN1-225ENST00000560005 KCNV1Q6PIU1 500 aa23.55■■□□□ 1.36
PSEN1-225ENST00000560005 PHOX2BQ99453 314 aa23.55■■□□□ 1.36
PSEN1-225ENST00000560005 POP1Q99575 1024 aaKnown RBP23.55■■□□□ 1.36
PSEN1-225ENST00000560005 MTA3Q9BTC8 594 aa23.55■■□□□ 1.36
PSEN1-225ENST00000560005 JMJD4Q9H9V9 463 aa23.55■■□□□ 1.36
PSEN1-225ENST00000560005 CHMP5Q9NZZ3 219 aa23.55■■□□□ 1.36
PSEN1-225ENST00000560005 TAF6LQ9Y6J9 622 aa23.55■■□□□ 1.36
PSEN1-225ENST00000560005 TECTAO75443 2155 aa23.55■■□□□ 1.36
PSEN1-225ENST00000560005 H3BRB1 525 aa23.54■■□□□ 1.36
PSEN1-225ENST00000560005 OPLAHO14841 1288 aa23.54■■□□□ 1.36
PSEN1-225ENST00000560005 MBTPS2O43462 519 aa23.54■■□□□ 1.36
PSEN1-225ENST00000560005 HSD17B4P51659 736 aa23.54■■□□□ 1.36
PSEN1-225ENST00000560005 SP2Q02086 613 aa23.54■■□□□ 1.36
PSEN1-225ENST00000560005 HYAL1Q12794 435 aa23.54■■□□□ 1.36
PSEN1-225ENST00000560005 ASPRV1Q53RT3 343 aa23.54■■□□□ 1.36
PSEN1-225ENST00000560005 RNF135Q8IUD6 432 aa23.54■■□□□ 1.36
PSEN1-225ENST00000560005 FIBCD1Q8N539 461 aa23.54■■□□□ 1.36
PSEN1-225ENST00000560005 TUT1Q9H6E5 874 aaKnown RBP23.54■■□□□ 1.36
PSEN1-225ENST00000560005 KAT14Q9H8E8 782 aa23.54■■□□□ 1.36
PSEN1-225ENST00000560005 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.54■■□□□ 1.36
PSEN1-225ENST00000560005 GRM6O15303 877 aa23.53■■□□□ 1.36
PSEN1-225ENST00000560005 CAND2O75155 1236 aa23.53■■□□□ 1.36
PSEN1-225ENST00000560005 CPA1P15085 419 aa23.53■■□□□ 1.36
PSEN1-225ENST00000560005 RNPEPQ9H4A4 650 aa23.53■■□□□ 1.36
PSEN1-225ENST00000560005 MLXIPQ9HAP2 919 aa23.53■■□□□ 1.36
PSEN1-225ENST00000560005 C5orf67F2Z3F1 127 aa23.52■■□□□ 1.36
PSEN1-225ENST00000560005 CSPG5O95196 566 aa23.52■■□□□ 1.36
PSEN1-225ENST00000560005 Q6ZUG5 572 aa23.52■■□□□ 1.36
PSEN1-225ENST00000560005 VSIG10LQ86VR7 867 aa23.52■■□□□ 1.36
PSEN1-225ENST00000560005 IQCA1Q86XH1 822 aa23.52■■□□□ 1.36
PSEN1-225ENST00000560005 MB21D2Q8IYB1 491 aaPredicted RBP23.52■■□□□ 1.36
PSEN1-225ENST00000560005 IL31RAQ8NI17 732 aa23.52■■□□□ 1.36
PSEN1-225ENST00000560005 GPKOWQ92917 476 aaPredicted RBP eCLIP23.52■■□□□ 1.36
PSEN1-225ENST00000560005 ZFP91Q96JP5 570 aaPredicted RBP23.52■■□□□ 1.36
PSEN1-225ENST00000560005 TMEM87BQ96K49 555 aa23.52■■□□□ 1.36
PSEN1-225ENST00000560005 C11orf84Q9BUA3 381 aaPredicted RBP23.52■■□□□ 1.36
PSEN1-225ENST00000560005 AGXT2Q9BYV1 514 aa23.52■■□□□ 1.36
PSEN1-225ENST00000560005 SLKQ9H2G2 1235 aaPredicted RBP23.52■■□□□ 1.36
PSEN1-225ENST00000560005 TBX10O75333 385 aa23.51■■□□□ 1.35
PSEN1-225ENST00000560005 LGALS2P05162 132 aa23.51■■□□□ 1.35
PSEN1-225ENST00000560005 RB1P06400 928 aa23.51■■□□□ 1.35
PSEN1-225ENST00000560005 PARP1P09874 1014 aaKnown RBP23.51■■□□□ 1.35
PSEN1-225ENST00000560005 LINC00271P0C7V0 271 aa23.51■■□□□ 1.35
PSEN1-225ENST00000560005 PDIA4P13667 645 aaKnown RBP23.51■■□□□ 1.35
PSEN1-225ENST00000560005 GTF2F1P35269 517 aaKnown RBP eCLIP23.51■■□□□ 1.35
PSEN1-225ENST00000560005 GHRHRQ02643 423 aa23.51■■□□□ 1.35
PSEN1-225ENST00000560005 SMAD4Q13485 552 aaKnown RBP23.51■■□□□ 1.35
PSEN1-225ENST00000560005 PGM5Q15124 567 aa23.51■■□□□ 1.35
PSEN1-225ENST00000560005 SPRYD3Q8NCJ5 442 aa23.51■■□□□ 1.35
PSEN1-225ENST00000560005 PRSS33Q8NF86 280 aa23.51■■□□□ 1.35
PSEN1-225ENST00000560005 APBB2Q92870 758 aa23.51■■□□□ 1.35
PSEN1-225ENST00000560005 AMNQ9BXJ7 453 aa23.51■■□□□ 1.35
PSEN1-225ENST00000560005 LMAN2LQ9H0V9 348 aa23.51■■□□□ 1.35
PSEN1-225ENST00000560005 IGFLR1Q9H665 355 aa23.51■■□□□ 1.35
PSEN1-225ENST00000560005 STXBP3O00186 592 aa23.5■■□□□ 1.35
PSEN1-225ENST00000560005 KDM4AO75164 1064 aa23.5■■□□□ 1.35
PSEN1-225ENST00000560005 TGFB3P10600 412 aa23.5■■□□□ 1.35
PSEN1-225ENST00000560005 HOXA13P31271 388 aaPredicted RBP23.5■■□□□ 1.35
PSEN1-225ENST00000560005 BMPR1AP36894 532 aa23.5■■□□□ 1.35
PSEN1-225ENST00000560005 EDAQ92838 391 aa23.5■■□□□ 1.35
PSEN1-225ENST00000560005 BCAS3Q9H6U6 928 aa23.5■■□□□ 1.35
PSEN1-225ENST00000560005 SETD4Q9NVD3 440 aa23.5■■□□□ 1.35
PSEN1-225ENST00000560005 LINC01565O15544 149 aa23.49■■□□□ 1.35
PSEN1-225ENST00000560005 PRC1O43663 620 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms