RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 MBOAT7Q96N66 472 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 LRRC1Q9BTT6 524 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 CEP72Q9P209 647 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 NYAP2Q9P242 653 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.08□□□□□ -0.64
LRRC28-216ENST00000559819 COL11A2P13942 1736 aaPredicted RBP11.08□□□□□ -0.64
LRRC28-216ENST00000559819 CYP3A7-CYP3A51PA0A087WV96 503 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 TARSL2A2RTX5 802 aaKnown RBP11.08□□□□□ -0.64
LRRC28-216ENST00000559819 NDUFB10O96000 172 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 TUBBP07437 444 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 ACTN1P12814 892 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 CYP3A7P24462 503 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 ALDH1B1P30837 517 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 USP11P51784 963 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 SLC7A5Q01650 507 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 CYP4A11Q02928 519 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 MAPK8IP2Q13387 824 aaPredicted RBP11.08□□□□□ -0.64
LRRC28-216ENST00000559819 ADAM9Q13443 819 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 RRP1BQ14684 758 aaKnown RBP11.08□□□□□ -0.64
LRRC28-216ENST00000559819 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.08□□□□□ -0.64
LRRC28-216ENST00000559819 KRT27Q7Z3Y8 459 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 LENG9Q96B70 501 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 MS4A14Q96JA4 679 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 CEP63Q96MT8 703 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 TRERF1Q96PN7 1200 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 HPCAL4Q9UM19 191 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 RSPH10B2B2RC85 870 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 PJA2O43164 708 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 SYF2O95926 243 aaKnown RBP11.08□□□□□ -0.64
LRRC28-216ENST00000559819 RSPH10BP0C881 870 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 SPATA31C1P0DKV0 1188 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 MYBP10242 640 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 GIT2Q14161 759 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 DACT2Q5SW24 774 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 CCNI2Q6ZMN8 369 aaPredicted RBP11.08□□□□□ -0.64
LRRC28-216ENST00000559819 SFR1Q86XK3 245 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 DNAAF5Q86Y56 855 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 SPICE1Q8N0Z3 855 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 FAM133AQ8N9E0 248 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 CRYGNQ8WXF5 182 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 ALS2CR12Q96Q35 445 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 NAP1L4Q99733 375 aaKnown RBP11.08□□□□□ -0.64
LRRC28-216ENST00000559819 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.08□□□□□ -0.64
LRRC28-216ENST00000559819 PACSIN1Q9BY11 444 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 PI4KBQ9UBF8 816 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 DMGDHQ9UI17 866 aaKnown RBP11.08□□□□□ -0.64
LRRC28-216ENST00000559819 HYOU1Q9Y4L1 999 aa11.08□□□□□ -0.64
LRRC28-216ENST00000559819 ZC3H4Q9UPT8 1303 aaKnown RBP11.07□□□□□ -0.64
LRRC28-216ENST00000559819 ECE2O60344 883 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 PRPF6O94906 941 aaKnown RBP11.07□□□□□ -0.64
LRRC28-216ENST00000559819 NR2F2P24468 414 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 HSPA1LP34931 641 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 HOXD13P35453 343 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 SLC9C1Q4G0N8 1177 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 HSP90B2PQ58FF3 399 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 KLHDC7AQ5VTJ3 777 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 MSL3Q8N5Y2 521 aaKnown RBP11.07□□□□□ -0.64
LRRC28-216ENST00000559819 SPATA4Q8NEY3 305 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 TBC1D5Q92609 795 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 MASTLQ96GX5 879 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 REEP2Q9BRK0 252 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 SELENOOQ9BVL4 669 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 AMNQ9BXJ7 453 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 TLR10Q9BXR5 811 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 TMX4Q9H1E5 349 aaPredicted RBP11.07□□□□□ -0.64
LRRC28-216ENST00000559819 TDRD3Q9H7E2 651 aaKnown RBP11.07□□□□□ -0.64
LRRC28-216ENST00000559819 SSU72P8A0A1W2PR75 194 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 FRMD3A2A2Y4 597 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 OPLAHO14841 1288 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 GH2P01242 217 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 SERPING1P05155 500 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 PDE6BP35913 854 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 KCNH2Q12809 1159 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 ABCB5Q2M3G0 1257 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 SYDE2Q5VT97 1194 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 TATDN1Q6P1N9 297 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 FOXR2Q6PJQ5 311 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 PODNQ7Z5L7 613 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 FBXO11Q86XK2 927 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 SLFN12Q8IYM2 578 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 NLGN1Q8N2Q7 840 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 FAM71BQ8TC56 605 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 EDEM3Q9BZQ6 932 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 GANQ9H2C0 597 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 IKZF4Q9H2S9 585 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 PLEKHA4Q9H4M7 779 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 CALCOCO1Q9P1Z2 691 aa11.07□□□□□ -0.64
LRRC28-216ENST00000559819 MSH4O15457 936 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 RNF40O75150 1001 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 FTCDO95954 541 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 SLC9A1P19634 815 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 AP3B2Q13367 1082 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 MMGT1Q8N4V1 131 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 ZFP91Q96JP5 570 aaPredicted RBP11.06□□□□□ -0.64
LRRC28-216ENST00000559819 NOX5Q96PH1 765 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 IDI2Q9BXS1 227 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 HDAC9Q9UKV0 1011 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 PACSIN2Q9UNF0 486 aaPredicted RBP11.06□□□□□ -0.64
LRRC28-216ENST00000559819 A0A087X0T9 212 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 A0A1W2PRG0 241 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms