RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 SRGAP2CP0DJJ0 459 aa6.27□□□□□ -1.41
CTDSPL2-207ENST00000559738 PYGMP11217 842 aa6.27□□□□□ -1.41
CTDSPL2-207ENST00000559738 CNR2P34972 360 aa6.27□□□□□ -1.41
CTDSPL2-207ENST00000559738 EPHA5P54756 1037 aa6.27□□□□□ -1.41
CTDSPL2-207ENST00000559738 TRIM61Q5EBN2 209 aa6.27□□□□□ -1.41
CTDSPL2-207ENST00000559738 ZFYVE27Q5T4F4 411 aa6.27□□□□□ -1.41
CTDSPL2-207ENST00000559738 TMC5Q6UXY8 1006 aa6.27□□□□□ -1.41
CTDSPL2-207ENST00000559738 UBXN4Q92575 508 aa6.27□□□□□ -1.41
CTDSPL2-207ENST00000559738 SCLYQ96I15 445 aa6.27□□□□□ -1.41
CTDSPL2-207ENST00000559738 KANSL2Q9H9L4 492 aa6.27□□□□□ -1.41
CTDSPL2-207ENST00000559738 NDOR1Q9UHB4 597 aa6.27□□□□□ -1.41
CTDSPL2-207ENST00000559738 DUSP10Q9Y6W6 482 aa6.27□□□□□ -1.41
CTDSPL2-207ENST00000559738 ACOT7O00154 380 aa6.26□□□□□ -1.41
CTDSPL2-207ENST00000559738 RASGRP1O95267 797 aa6.26□□□□□ -1.41
CTDSPL2-207ENST00000559738 AMY2AP04746 511 aa6.26□□□□□ -1.41
CTDSPL2-207ENST00000559738 FAHP16930 419 aa6.26□□□□□ -1.41
CTDSPL2-207ENST00000559738 AMY2BP19961 511 aa6.26□□□□□ -1.41
CTDSPL2-207ENST00000559738 NFE2L2Q16236 605 aa6.26□□□□□ -1.41
CTDSPL2-207ENST00000559738 CCDC144BQ3MJ40 725 aa6.26□□□□□ -1.41
CTDSPL2-207ENST00000559738 PAN2Q504Q3 1202 aaKnown RBP6.26□□□□□ -1.41
CTDSPL2-207ENST00000559738 KCTD1Q719H9 257 aa6.26□□□□□ -1.41
CTDSPL2-207ENST00000559738 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.26□□□□□ -1.41
CTDSPL2-207ENST00000559738 FBXW5Q969U6 566 aa6.26□□□□□ -1.41
CTDSPL2-207ENST00000559738 ZSWIM4Q9H7M6 989 aa6.26□□□□□ -1.41
CTDSPL2-207ENST00000559738 DDX3XO00571 662 aaKnown RBP eCLIP6.25□□□□□ -1.41
CTDSPL2-207ENST00000559738 PDE6AP16499 860 aa6.25□□□□□ -1.41
CTDSPL2-207ENST00000559738 MLLT6P55198 1093 aaPredicted RBP6.25□□□□□ -1.41
CTDSPL2-207ENST00000559738 SQSTM1Q13501 440 aa6.25□□□□□ -1.41
CTDSPL2-207ENST00000559738 GPR19Q15760 415 aa6.25□□□□□ -1.41
CTDSPL2-207ENST00000559738 ARHGAP36Q6ZRI8 547 aa6.25□□□□□ -1.41
CTDSPL2-207ENST00000559738 C16orf59Q7L2K0 433 aa6.25□□□□□ -1.41
CTDSPL2-207ENST00000559738 OSTM1Q86WC4 334 aa6.25□□□□□ -1.41
CTDSPL2-207ENST00000559738 TMEM209Q96SK2 561 aa6.25□□□□□ -1.41
CTDSPL2-207ENST00000559738 PIF1Q9H611 641 aa6.25□□□□□ -1.41
CTDSPL2-207ENST00000559738 CATSPERZQ9NTU4 200 aa6.25□□□□□ -1.41
CTDSPL2-207ENST00000559738 CCDC66A2RUB6 948 aa6.24□□□□□ -1.41
CTDSPL2-207ENST00000559738 FAM90A27PA6NNH2 459 aa6.24□□□□□ -1.41
CTDSPL2-207ENST00000559738 MAN2B1O00754 1011 aa6.24□□□□□ -1.41
CTDSPL2-207ENST00000559738 CKMP06732 381 aa6.24□□□□□ -1.41
CTDSPL2-207ENST00000559738 ZNF28P17035 718 aa6.24□□□□□ -1.41
CTDSPL2-207ENST00000559738 NAT1P18440 290 aa6.24□□□□□ -1.41
CTDSPL2-207ENST00000559738 JAM2P57087 298 aa6.24□□□□□ -1.41
CTDSPL2-207ENST00000559738 KRTAP10-2P60368 255 aa6.24□□□□□ -1.41
CTDSPL2-207ENST00000559738 RGL3Q3MIN7 710 aa6.24□□□□□ -1.41
CTDSPL2-207ENST00000559738 PHF19Q5T6S3 580 aa6.24□□□□□ -1.41
CTDSPL2-207ENST00000559738 FGD2Q7Z6J4 655 aa6.24□□□□□ -1.41
CTDSPL2-207ENST00000559738 PTRH1Q86Y79 214 aaKnown RBP6.24□□□□□ -1.41
CTDSPL2-207ENST00000559738 DTX3Q8N9I9 347 aa6.24□□□□□ -1.41
CTDSPL2-207ENST00000559738 CLIC6Q96NY7 704 aa6.24□□□□□ -1.41
CTDSPL2-207ENST00000559738 MRPL4Q9BYD3 311 aaKnown RBP6.24□□□□□ -1.41
CTDSPL2-207ENST00000559738 NCOA5Q9HCD5 579 aaKnown RBP6.24□□□□□ -1.41
CTDSPL2-207ENST00000559738 SFMBT1Q9UHJ3 866 aa6.24□□□□□ -1.41
CTDSPL2-207ENST00000559738 SRPK3Q9UPE1 567 aa6.24□□□□□ -1.41
CTDSPL2-207ENST00000559738 NUB1Q9Y5A7 615 aa6.24□□□□□ -1.41
CTDSPL2-207ENST00000559738 CCDC163A0A0D9SF12 145 aa6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 ZNF561-AS1K7EIQ3 104 aa6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 K7ESM1 405 aa6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 KCNQ2O43526 872 aa6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 EFCAB14O75071 495 aa6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 KCNA6P17658 529 aa6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 KRT15P19012 456 aa6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 DNM2P50570 870 aa6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 NFKB2Q00653 900 aa6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 EFEMP1Q12805 493 aa6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 CD276Q5ZPR3 534 aa6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 MCTP2Q6DN12 878 aa6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 BRAPQ7Z569 592 aa6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 ZC3H7AQ8IWR0 971 aaKnown RBP6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 TXNDC5Q8NBS9 432 aaKnown RBP6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 ZCCHC14Q8WYQ9 949 aaKnown RBP6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 MRFAP1L1Q96HT8 127 aa6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 SMURF1Q9HCE7 757 aa6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 TRIM39Q9HCM9 518 aa6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 CROTQ9UKG9 612 aa6.23□□□□□ -1.41
CTDSPL2-207ENST00000559738 TCRBV16S1A1N1A0A5B0 115 aa6.22□□□□□ -1.41
CTDSPL2-207ENST00000559738 KCNK3O14649 394 aa6.22□□□□□ -1.41
CTDSPL2-207ENST00000559738 RAPGEF3O95398 923 aa6.22□□□□□ -1.41
CTDSPL2-207ENST00000559738 ADRB1P08588 477 aa6.22□□□□□ -1.41
CTDSPL2-207ENST00000559738 COL6A1P12109 1028 aa6.22□□□□□ -1.41
CTDSPL2-207ENST00000559738 IL13P35225 146 aa6.22□□□□□ -1.41
CTDSPL2-207ENST00000559738 ST5P78524 1137 aa6.22□□□□□ -1.41
CTDSPL2-207ENST00000559738 LACTBP83111 547 aaPredicted RBP6.22□□□□□ -1.41
CTDSPL2-207ENST00000559738 FAM26FQ5R3K3 315 aa6.22□□□□□ -1.41
CTDSPL2-207ENST00000559738 PRAMEF18Q5VWM3 479 aa6.22□□□□□ -1.41
CTDSPL2-207ENST00000559738 VASNQ6EMK4 673 aa6.22□□□□□ -1.41
CTDSPL2-207ENST00000559738 ABHD17CQ6PCB6 329 aa6.22□□□□□ -1.41
CTDSPL2-207ENST00000559738 SH3TC2Q8TF17 1288 aa6.22□□□□□ -1.41
CTDSPL2-207ENST00000559738 MAGEB10Q96LZ2 347 aaPredicted RBP6.22□□□□□ -1.41
CTDSPL2-207ENST00000559738 CLUHP3Q96NS8 147 aa6.22□□□□□ -1.41
CTDSPL2-207ENST00000559738 DLL4Q9NR61 685 aa6.22□□□□□ -1.41
CTDSPL2-207ENST00000559738 COQ6Q9Y2Z9 468 aa6.22□□□□□ -1.41
CTDSPL2-207ENST00000559738 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.21□□□□□ -1.42
CTDSPL2-207ENST00000559738 PTPN1P18031 435 aaKnown RBP6.21□□□□□ -1.42
CTDSPL2-207ENST00000559738 PFKPQ01813 784 aa6.21□□□□□ -1.42
CTDSPL2-207ENST00000559738 SEC23AQ15436 765 aa6.21□□□□□ -1.42
CTDSPL2-207ENST00000559738 CRY1Q16526 586 aa6.21□□□□□ -1.42
CTDSPL2-207ENST00000559738 SKIDA1Q1XH10 827 aa6.21□□□□□ -1.42
CTDSPL2-207ENST00000559738 SPATS1Q496A3 300 aa6.21□□□□□ -1.42
CTDSPL2-207ENST00000559738 FIGNQ5HY92 759 aa6.21□□□□□ -1.42
CTDSPL2-207ENST00000559738 BTBD8Q5XKL5 378 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms