RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 CKBP12277 381 aa9.32□□□□□ -0.92
SNX1-207ENST00000559401 SELPP16109 830 aa9.32□□□□□ -0.92
SNX1-207ENST00000559401 DNAJB2P25686 324 aa9.32□□□□□ -0.92
SNX1-207ENST00000559401 THPOP40225 353 aa9.32□□□□□ -0.92
SNX1-207ENST00000559401 NEK4P51957 841 aa9.32□□□□□ -0.92
SNX1-207ENST00000559401 SCRN1Q12765 414 aa9.32□□□□□ -0.92
SNX1-207ENST00000559401 FAM109BQ6ICB4 259 aaPredicted RBP9.32□□□□□ -0.92
SNX1-207ENST00000559401 HERVK_113Q902F9 699 aa9.32□□□□□ -0.92
SNX1-207ENST00000559401 AIFM3Q96NN9 605 aa9.32□□□□□ -0.92
SNX1-207ENST00000559401 CTAGE1Q96RT6 745 aa9.32□□□□□ -0.92
SNX1-207ENST00000559401 RNPEPQ9H4A4 650 aa9.32□□□□□ -0.92
SNX1-207ENST00000559401 AGO4Q9HCK5 861 aaKnown RBP9.32□□□□□ -0.92
SNX1-207ENST00000559401 SH3GLB2Q9NR46 395 aa9.32□□□□□ -0.92
SNX1-207ENST00000559401 SETD4Q9NVD3 440 aa9.32□□□□□ -0.92
SNX1-207ENST00000559401 ERAP1Q9NZ08 941 aa9.32□□□□□ -0.92
SNX1-207ENST00000559401 CXXC1Q9P0U4 656 aaPredicted RBP9.32□□□□□ -0.92
SNX1-207ENST00000559401 TPCN1Q9ULQ1 816 aa9.32□□□□□ -0.92
SNX1-207ENST00000559401 SLC4A7Q9Y6M7 1214 aa9.32□□□□□ -0.92
SNX1-207ENST00000559401 RANBP2P49792 3224 aaKnown RBP9.32□□□□□ -0.92
SNX1-207ENST00000559401 NFASCO94856 1347 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 GSTTP1A0A1W2PQM5 241 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 FAM86B1E9PN63 330 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 MEIS1O00470 390 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 BACH1O14867 736 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 TREHO43280 583 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 PFKFB2O60825 505 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 CYP3A4P08684 503 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 CTSHP09668 335 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 FAM86B2P0C5J1 330 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 XBP1P17861 261 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 KCNJ6P48051 423 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 ACTR2P61160 394 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 IGBP1P78318 339 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 SETQ01105 290 aaPredicted RBP9.31□□□□□ -0.92
SNX1-207ENST00000559401 PPFIA1Q13136 1202 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 ITGB3BPQ13352 177 aaPredicted RBP9.31□□□□□ -0.92
SNX1-207ENST00000559401 HIC1Q14526 733 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 PRR16Q569H4 304 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 ZNF618Q5T7W0 954 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 NIPA1Q7RTP0 329 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 SERINC5Q86VE9 423 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 BLIDQ8IZY5 108 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 NECAB1Q8N987 351 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 LMBR1Q8WVP7 490 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 WNT8BQ93098 351 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 TIFAQ96CG3 184 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 ZNF577Q9BSK1 485 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 SMARCAD1Q9H4L7 1026 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 MTMR10Q9NXD2 777 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 MSRAQ9UJ68 235 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 PCDHA4Q9UN74 947 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 TRPC6Q9Y210 931 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 EMSYQ7Z589 1322 aa9.31□□□□□ -0.92
SNX1-207ENST00000559401 IGLV3-22A0A075B6J6 115 aa9.3□□□□□ -0.92
SNX1-207ENST00000559401 RSPH10B2B2RC85 870 aa9.3□□□□□ -0.92
SNX1-207ENST00000559401 IPO5O00410 1097 aaKnown RBP9.3□□□□□ -0.92
SNX1-207ENST00000559401 PARNO95453 639 aaKnown RBP9.3□□□□□ -0.92
SNX1-207ENST00000559401 LARGE1O95461 756 aa9.3□□□□□ -0.92
SNX1-207ENST00000559401 RSPH10BP0C881 870 aa9.3□□□□□ -0.92
SNX1-207ENST00000559401 ATP2A2P16615 1042 aaKnown RBP9.3□□□□□ -0.92
SNX1-207ENST00000559401 PBX2P40425 430 aa9.3□□□□□ -0.92
SNX1-207ENST00000559401 FOSBP53539 338 aa9.3□□□□□ -0.92
SNX1-207ENST00000559401 RAB30Q15771 203 aa9.3□□□□□ -0.92
SNX1-207ENST00000559401 RASIP1Q5U651 963 aa9.3□□□□□ -0.92
SNX1-207ENST00000559401 FAM160B1Q5W0V3 765 aa9.3□□□□□ -0.92
SNX1-207ENST00000559401 TBCKQ8TEA7 893 aa9.3□□□□□ -0.92
SNX1-207ENST00000559401 WASF1Q92558 559 aa9.3□□□□□ -0.92
SNX1-207ENST00000559401 PBX4Q9BYU1 374 aa9.3□□□□□ -0.92
SNX1-207ENST00000559401 C22orf23Q9BZE7 217 aa9.3□□□□□ -0.92
SNX1-207ENST00000559401 ORC3Q9UBD5 711 aaPredicted RBP9.3□□□□□ -0.92
SNX1-207ENST00000559401 TUBE1Q9UJT0 475 aa9.3□□□□□ -0.92
SNX1-207ENST00000559401 KCNJ14Q9UNX9 436 aa9.3□□□□□ -0.92
SNX1-207ENST00000559401 SAMM50Q9Y512 469 aa9.3□□□□□ -0.92
SNX1-207ENST00000559401 MYH9P35579 1960 aaKnown RBP9.3□□□□□ -0.92
SNX1-207ENST00000559401 NRCAMQ92823 1304 aa9.3□□□□□ -0.92
SNX1-207ENST00000559401 STK36Q9NRP7 1315 aa9.3□□□□□ -0.92
SNX1-207ENST00000559401 TET1Q8NFU7 2136 aa9.29□□□□□ -0.92
SNX1-207ENST00000559401 CCDC194A0A1B0GVG4 234 aa9.29□□□□□ -0.92
SNX1-207ENST00000559401 NBNO60934 754 aa9.29□□□□□ -0.92
SNX1-207ENST00000559401 STAT5BP51692 787 aa9.29□□□□□ -0.92
SNX1-207ENST00000559401 RABGGTBP53611 331 aa9.29□□□□□ -0.92
SNX1-207ENST00000559401 RBL2Q08999 1139 aa9.29□□□□□ -0.92
SNX1-207ENST00000559401 NONOQ15233 471 aaKnown RBP eCLIP9.29□□□□□ -0.92
SNX1-207ENST00000559401 GRIK4Q16099 956 aa9.29□□□□□ -0.92
SNX1-207ENST00000559401 ME3Q16798 604 aa9.29□□□□□ -0.92
SNX1-207ENST00000559401 TRIM71Q2Q1W2 868 aaKnown RBP9.29□□□□□ -0.92
SNX1-207ENST00000559401 C8orf34Q49A92 452 aa9.29□□□□□ -0.92
SNX1-207ENST00000559401 MIS18BP1Q6P0N0 1132 aa9.29□□□□□ -0.92
SNX1-207ENST00000559401 CNKSR3Q6P9H4 555 aa9.29□□□□□ -0.92
SNX1-207ENST00000559401 TRMT1LQ7Z2T5 733 aaKnown RBP9.29□□□□□ -0.92
SNX1-207ENST00000559401 CKAP2LQ8IYA6 745 aa9.29□□□□□ -0.92
SNX1-207ENST00000559401 CRYGNQ8WXF5 182 aa9.29□□□□□ -0.92
SNX1-207ENST00000559401 TNPO1Q92973 898 aaKnown RBP9.29□□□□□ -0.92
SNX1-207ENST00000559401 GTF3C6Q969F1 213 aa9.29□□□□□ -0.92
SNX1-207ENST00000559401 SLC9A7Q96T83 725 aa9.29□□□□□ -0.92
SNX1-207ENST00000559401 FAM49AQ9H0Q0 323 aaPredicted RBP9.29□□□□□ -0.92
SNX1-207ENST00000559401 NKX2-4Q9H2Z4 354 aa9.29□□□□□ -0.92
SNX1-207ENST00000559401 TTYH1Q9H313 450 aaPredicted RBP9.29□□□□□ -0.92
SNX1-207ENST00000559401 SEMA6BQ9H3T3 888 aa9.29□□□□□ -0.92
SNX1-207ENST00000559401 SLC28A3Q9HAS3 691 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms