RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 GRIN1Q05586 938 aa17.8■□□□□ 0.44
CDC42BPB-204ENST00000559043 PNOCQ13519 176 aa17.8■□□□□ 0.44
CDC42BPB-204ENST00000559043 PWP2Q15269 919 aaKnown RBP17.8■□□□□ 0.44
CDC42BPB-204ENST00000559043 LRRC8AQ8IWT6 810 aa17.8■□□□□ 0.44
CDC42BPB-204ENST00000559043 ETNPPLQ8TBG4 499 aa17.8■□□□□ 0.44
CDC42BPB-204ENST00000559043 SYNGAP1Q96PV0 1343 aa17.8■□□□□ 0.44
CDC42BPB-204ENST00000559043 KIAA1217Q5T5P2 1943 aa17.8■□□□□ 0.44
CDC42BPB-204ENST00000559043 UQCRHLA0A096LP55 91 aa17.79■□□□□ 0.44
CDC42BPB-204ENST00000559043 ARIH2O95376 493 aa17.79■□□□□ 0.44
CDC42BPB-204ENST00000559043 UQCRHP07919 91 aa17.79■□□□□ 0.44
CDC42BPB-204ENST00000559043 GCFC2P16383 781 aaKnown RBP17.79■□□□□ 0.44
CDC42BPB-204ENST00000559043 TRPV1Q8NER1 839 aa17.79■□□□□ 0.44
CDC42BPB-204ENST00000559043 KCNMB3Q9NPA1 279 aa17.79■□□□□ 0.44
CDC42BPB-204ENST00000559043 PTCH2Q9Y6C5 1203 aa17.79■□□□□ 0.44
CDC42BPB-204ENST00000559043 SPATA31C2B4DYI2 1134 aa17.79■□□□□ 0.44
CDC42BPB-204ENST00000559043 ADCY3O60266 1144 aa17.79■□□□□ 0.44
CDC42BPB-204ENST00000559043 CTCFP49711 727 aaPredicted RBP17.79■□□□□ 0.44
CDC42BPB-204ENST00000559043 TPM4P67936 248 aa17.79■□□□□ 0.44
CDC42BPB-204ENST00000559043 MTMR1Q13613 665 aa17.79■□□□□ 0.44
CDC42BPB-204ENST00000559043 NIPA1Q7RTP0 329 aa17.79■□□□□ 0.44
CDC42BPB-204ENST00000559043 MSL3Q8N5Y2 521 aaKnown RBP17.79■□□□□ 0.44
CDC42BPB-204ENST00000559043 HOOK1Q9UJC3 728 aaKnown RBP17.79■□□□□ 0.44
CDC42BPB-204ENST00000559043 TELO2Q9Y4R8 837 aa17.79■□□□□ 0.44
CDC42BPB-204ENST00000559043 ADCY6O43306 1168 aa17.78■□□□□ 0.44
CDC42BPB-204ENST00000559043 ZNF865P0CJ78 1059 aaPredicted RBP17.78■□□□□ 0.44
CDC42BPB-204ENST00000559043 ATP2C1P98194 919 aaPredicted RBP17.78■□□□□ 0.44
CDC42BPB-204ENST00000559043 ITGB3BPQ13352 177 aaPredicted RBP17.78■□□□□ 0.44
CDC42BPB-204ENST00000559043 ACVR2BQ13705 512 aa17.78■□□□□ 0.44
CDC42BPB-204ENST00000559043 SPECC1Q5M775 1068 aa17.78■□□□□ 0.44
CDC42BPB-204ENST00000559043 NT5DC1Q5TFE4 455 aa17.78■□□□□ 0.44
CDC42BPB-204ENST00000559043 CCDC62Q6P9F0 684 aa17.78■□□□□ 0.44
CDC42BPB-204ENST00000559043 AGO4Q9HCK5 861 aaKnown RBP17.78■□□□□ 0.44
CDC42BPB-204ENST00000559043 PKD2L1Q9P0L9 805 aa17.78■□□□□ 0.44
CDC42BPB-204ENST00000559043 IMPACTQ9P2X3 320 aa17.78■□□□□ 0.44
CDC42BPB-204ENST00000559043 B4DLN1 442 aa17.77■□□□□ 0.44
CDC42BPB-204ENST00000559043 DHX15O43143 795 aaKnown RBP17.77■□□□□ 0.44
CDC42BPB-204ENST00000559043 STAM2O75886 525 aa17.77■□□□□ 0.44
CDC42BPB-204ENST00000559043 BMP15O95972 392 aa17.77■□□□□ 0.44
CDC42BPB-204ENST00000559043 ICAM3P32942 547 aa17.77■□□□□ 0.44
CDC42BPB-204ENST00000559043 RAET1EQ8TD07 263 aa17.77■□□□□ 0.44
CDC42BPB-204ENST00000559043 GPRASP2Q96D09 838 aa17.77■□□□□ 0.44
CDC42BPB-204ENST00000559043 HSD3B7Q9H2F3 369 aa17.77■□□□□ 0.44
CDC42BPB-204ENST00000559043 ABHD16BQ9H3Z7 469 aa17.77■□□□□ 0.44
CDC42BPB-204ENST00000559043 PCDHA5Q9Y5H7 936 aa17.77■□□□□ 0.44
CDC42BPB-204ENST00000559043 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.77■□□□□ 0.43
CDC42BPB-204ENST00000559043 POTEFA5A3E0 1075 aa17.77■□□□□ 0.43
CDC42BPB-204ENST00000559043 ADCYAP1R1P41586 468 aa17.77■□□□□ 0.43
CDC42BPB-204ENST00000559043 CACNB2Q08289 660 aaPredicted RBP17.77■□□□□ 0.43
CDC42BPB-204ENST00000559043 ARHGEF6Q15052 776 aa17.77■□□□□ 0.43
CDC42BPB-204ENST00000559043 CALCRLQ16602 461 aa17.77■□□□□ 0.43
CDC42BPB-204ENST00000559043 LY6KQ17RY6 165 aa17.77■□□□□ 0.43
CDC42BPB-204ENST00000559043 GJC2Q5T442 439 aaPredicted RBP17.77■□□□□ 0.43
CDC42BPB-204ENST00000559043 MYRIPQ8NFW9 859 aa17.77■□□□□ 0.43
CDC42BPB-204ENST00000559043 NAP1L4Q99733 375 aaKnown RBP17.77■□□□□ 0.43
CDC42BPB-204ENST00000559043 PTPN22Q9Y2R2 807 aa17.77■□□□□ 0.43
CDC42BPB-204ENST00000559043 RBM47A0AV96 593 aaKnown RBP17.76■□□□□ 0.43
CDC42BPB-204ENST00000559043 POLR2DO15514 142 aaKnown RBP17.76■□□□□ 0.43
CDC42BPB-204ENST00000559043 SORBS3O60504 671 aa17.76■□□□□ 0.43
CDC42BPB-204ENST00000559043 KCNA2P16389 499 aa17.76■□□□□ 0.43
CDC42BPB-204ENST00000559043 SARSP49591 514 aaKnown RBP17.76■□□□□ 0.43
CDC42BPB-204ENST00000559043 ISM2Q6H9L7 571 aa17.76■□□□□ 0.43
CDC42BPB-204ENST00000559043 NLRX1Q86UT6 975 aa17.76■□□□□ 0.43
CDC42BPB-204ENST00000559043 COPS5Q92905 334 aa17.76■□□□□ 0.43
CDC42BPB-204ENST00000559043 SLC5A5Q92911 643 aa17.76■□□□□ 0.43
CDC42BPB-204ENST00000559043 MPHOSPH6Q99547 160 aaKnown RBP17.76■□□□□ 0.43
CDC42BPB-204ENST00000559043 CSRNP2Q9H175 543 aa17.76■□□□□ 0.43
CDC42BPB-204ENST00000559043 VTA1Q9NP79 307 aa17.76■□□□□ 0.43
CDC42BPB-204ENST00000559043 DDX41Q9UJV9 622 aaKnown RBP17.76■□□□□ 0.43
CDC42BPB-204ENST00000559043 IPO5O00410 1097 aaKnown RBP17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 DYNC1I1O14576 645 aa17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 OR52Z1P0C646 297 aa17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 TXKP42681 527 aa17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 GSDMDP57764 484 aa17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 MYL5Q02045 173 aa17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 ORC2Q13416 577 aaPredicted RBP17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 POSTNQ15063 836 aa17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 KANK3Q6NY19 840 aa17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 PXYLP1Q8TE99 480 aa17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 ZNF577Q9BSK1 485 aa17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 XPO4Q9C0E2 1151 aaKnown RBP17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 ZHX1Q9UKY1 873 aaPredicted RBP17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 DOCK5Q9H7D0 1870 aa17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 BRCA2P51587 3418 aa17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 ACTN4O43707 911 aaKnown RBP17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 PSMD10O75832 226 aa17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 BMP6P22004 513 aa17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 PRMT2P55345 433 aa17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 FERMT2Q96AC1 680 aa17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 IFNKQ9P0W0 207 aa17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 SERTAD1Q9UHV2 236 aa17.75■□□□□ 0.43
CDC42BPB-204ENST00000559043 MAFGO15525 162 aa17.74■□□□□ 0.43
CDC42BPB-204ENST00000559043 CYBAP13498 195 aa17.74■□□□□ 0.43
CDC42BPB-204ENST00000559043 SETQ01105 290 aaPredicted RBP17.74■□□□□ 0.43
CDC42BPB-204ENST00000559043 SPIRE1Q08AE8 756 aa17.74■□□□□ 0.43
CDC42BPB-204ENST00000559043 ARID5BQ14865 1188 aa17.74■□□□□ 0.43
CDC42BPB-204ENST00000559043 GNPTABQ3T906 1256 aa17.74■□□□□ 0.43
CDC42BPB-204ENST00000559043 MFSD14CQ5VZR4 134 aa17.74■□□□□ 0.43
CDC42BPB-204ENST00000559043 SH3TC2Q8TF17 1288 aa17.74■□□□□ 0.43
CDC42BPB-204ENST00000559043 LENG1Q96BZ8 264 aaPredicted RBP17.74■□□□□ 0.43
CDC42BPB-204ENST00000559043 FAM20AQ96MK3 541 aa17.74■□□□□ 0.43
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