RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 GCLCP48506 637 aaPredicted RBP8.33□□□□□ -1.08
TRAF3-206ENST00000558880 HSD17B4P51659 736 aa8.33□□□□□ -1.08
TRAF3-206ENST00000558880 GUCY1B3Q02153 619 aa8.33□□□□□ -1.08
TRAF3-206ENST00000558880 USH1GQ495M9 461 aa8.33□□□□□ -1.08
TRAF3-206ENST00000558880 LCE2AQ5TA79 106 aaPredicted RBP8.33□□□□□ -1.08
TRAF3-206ENST00000558880 KRT40Q6A162 431 aa8.33□□□□□ -1.08
TRAF3-206ENST00000558880 SLC30A10Q6XR72 485 aa8.33□□□□□ -1.08
TRAF3-206ENST00000558880 DAGLBQ8NCG7 672 aa8.33□□□□□ -1.08
TRAF3-206ENST00000558880 SHCBP1Q8NEM2 672 aa8.33□□□□□ -1.08
TRAF3-206ENST00000558880 RASGRP4Q8TDF6 673 aa8.33□□□□□ -1.08
TRAF3-206ENST00000558880 SYTL5Q8TDW5 730 aaPredicted RBP8.33□□□□□ -1.08
TRAF3-206ENST00000558880 PAGR1Q9BTK6 254 aa8.33□□□□□ -1.08
TRAF3-206ENST00000558880 AMNQ9BXJ7 453 aa8.33□□□□□ -1.08
TRAF3-206ENST00000558880 ETNK1Q9HBU6 452 aa8.33□□□□□ -1.08
TRAF3-206ENST00000558880 A1CFQ9NQ94 594 aaKnown RBP8.33□□□□□ -1.08
TRAF3-206ENST00000558880 RNF146Q9NTX7 359 aa8.33□□□□□ -1.08
TRAF3-206ENST00000558880 CCPG1Q9ULG6 757 aa8.33□□□□□ -1.08
TRAF3-206ENST00000558880 PCDHA1Q9Y5I3 950 aa8.33□□□□□ -1.08
TRAF3-206ENST00000558880 CDKL5O76039 1030 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 MMP1P03956 469 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 ALAS1P13196 640 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 RPS6P62753 249 aaKnown RBP8.32□□□□□ -1.08
TRAF3-206ENST00000558880 HMGN5P82970 282 aaKnown RBP8.32□□□□□ -1.08
TRAF3-206ENST00000558880 POU4F2Q12837 409 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 IKQ13123 557 aaPredicted RBP8.32□□□□□ -1.08
TRAF3-206ENST00000558880 UBE2SQ16763 222 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 EML3Q32P44 896 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 USP17L6PQ6QN14 398 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 Q7L0L9 218 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 HEATR3Q7Z4Q2 680 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 CCDC155Q8N6L0 562 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 FAM133AQ8N9E0 248 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 RGS22Q8NE09 1264 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 GPRC5AQ8NFJ5 357 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 SMCR8Q8TEV9 937 aaPredicted RBP8.32□□□□□ -1.08
TRAF3-206ENST00000558880 CHAMP1Q96JM3 812 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 CALR3Q96L12 384 aaKnown RBP8.32□□□□□ -1.08
TRAF3-206ENST00000558880 IPO9Q96P70 1041 aaKnown RBP8.32□□□□□ -1.08
TRAF3-206ENST00000558880 TRERF1Q96PN7 1200 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 HTATIP2Q9BUP3 242 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 PRO3102Q9H379 93 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 ZFYVE28Q9HCC9 887 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 RIC8AQ9NPQ8 531 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 SH3GLB2Q9NR46 395 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 TMEM260Q9NX78 707 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 ISY1Q9ULR0 285 aaKnown RBP8.32□□□□□ -1.08
TRAF3-206ENST00000558880 PCDHA6Q9UN73 950 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 SMC3Q9UQE7 1217 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.32□□□□□ -1.08
TRAF3-206ENST00000558880 PCDHA8Q9Y5H6 950 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 NR2E3Q9Y5X4 410 aa8.32□□□□□ -1.08
TRAF3-206ENST00000558880 ABCB11O95342 1321 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 FRMPD4Q14CM0 1322 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 RPTORQ8N122 1335 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 RANBP2P49792 3224 aaKnown RBP8.31□□□□□ -1.08
TRAF3-206ENST00000558880 SMCO2A6NFE2 343 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 BTBD18B2RXH4 712 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 hCG_1984214I3L0E3 225 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 BRD1O95696 1058 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 U2AF2P26368 475 aaKnown RBP eCLIP8.31□□□□□ -1.08
TRAF3-206ENST00000558880 HOXA13P31271 388 aaPredicted RBP8.31□□□□□ -1.08
TRAF3-206ENST00000558880 TOB1P50616 345 aaPredicted RBP8.31□□□□□ -1.08
TRAF3-206ENST00000558880 LACTBP83111 547 aaPredicted RBP8.31□□□□□ -1.08
TRAF3-206ENST00000558880 CNTN2Q02246 1040 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 CENPCQ03188 943 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 RESTQ13127 1097 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 BAATQ14032 418 aaPredicted RBP8.31□□□□□ -1.08
TRAF3-206ENST00000558880 GRB14Q14449 540 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 ARHGEF6Q15052 776 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 ZNF792Q3KQV3 632 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 TKFCQ3LXA3 575 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 CPLX2Q6PUV4 134 aaKnown RBP8.31□□□□□ -1.08
TRAF3-206ENST00000558880 GPR142Q7Z601 462 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 TRIM22Q8IYM9 498 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 DEFB123Q8N688 67 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 ZNF713Q8N859 430 aaPredicted RBP8.31□□□□□ -1.08
TRAF3-206ENST00000558880 CHST13Q8NET6 341 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 NPLOC4Q8TAT6 608 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 GTF3C2Q8WUA4 911 aaPredicted RBP8.31□□□□□ -1.08
TRAF3-206ENST00000558880 PGBD1Q96JS3 809 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 HOMER2Q9NSB8 354 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 CYP39A1Q9NYL5 469 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 PCDHA4Q9UN74 947 aa8.31□□□□□ -1.08
TRAF3-206ENST00000558880 SLC35F4A4IF30 521 aa8.3□□□□□ -1.08
TRAF3-206ENST00000558880 SLC25A27O95847 323 aa8.3□□□□□ -1.08
TRAF3-206ENST00000558880 EDNRBP24530 442 aa8.3□□□□□ -1.08
TRAF3-206ENST00000558880 ANP32AP39687 249 aaKnown RBP8.3□□□□□ -1.08
TRAF3-206ENST00000558880 NAPAP54920 295 aa8.3□□□□□ -1.08
TRAF3-206ENST00000558880 GDF10P55107 478 aa8.3□□□□□ -1.08
TRAF3-206ENST00000558880 PLS1Q14651 629 aa8.3□□□□□ -1.08
TRAF3-206ENST00000558880 MTFR1Q15390 333 aa8.3□□□□□ -1.08
TRAF3-206ENST00000558880 LARP1BQ659C4 914 aaKnown RBP8.3□□□□□ -1.08
TRAF3-206ENST00000558880 FAM173BQ6P4H8 233 aa8.3□□□□□ -1.08
TRAF3-206ENST00000558880 NCAPG2Q86XI2 1143 aa8.3□□□□□ -1.08
TRAF3-206ENST00000558880 DIS3L2Q8IYB7 885 aaKnown RBP8.3□□□□□ -1.08
TRAF3-206ENST00000558880 FAM177A1Q8N128 213 aaPredicted RBP8.3□□□□□ -1.08
TRAF3-206ENST00000558880 IL31RAQ8NI17 732 aa8.3□□□□□ -1.08
TRAF3-206ENST00000558880 C8orf76Q96K31 380 aa8.3□□□□□ -1.08
TRAF3-206ENST00000558880 TAAR1Q96RJ0 339 aa8.3□□□□□ -1.08
TRAF3-206ENST00000558880 KATNBL1Q9H079 304 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms