RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 PKN1Q16512 942 aa19.47■□□□□ 0.71
LRRC28-210ENST00000558879 TCTN1Q2MV58 587 aa19.47■□□□□ 0.71
LRRC28-210ENST00000558879 CNKSR3Q6P9H4 555 aa19.47■□□□□ 0.71
LRRC28-210ENST00000558879 MXRA8Q9BRK3 442 aa19.47■□□□□ 0.71
LRRC28-210ENST00000558879 FTOQ9C0B1 505 aaKnown RBP eCLIP19.47■□□□□ 0.71
LRRC28-210ENST00000558879 GLT8D2Q9H1C3 349 aa19.47■□□□□ 0.71
LRRC28-210ENST00000558879 EMSYQ7Z589 1322 aa19.47■□□□□ 0.71
LRRC28-210ENST00000558879 GSTTP1A0A1W2PQM5 241 aa19.46■□□□□ 0.71
LRRC28-210ENST00000558879 TREHO43280 583 aa19.46■□□□□ 0.71
LRRC28-210ENST00000558879 CAND2O75155 1236 aa19.46■□□□□ 0.71
LRRC28-210ENST00000558879 MYOGP15173 224 aa19.46■□□□□ 0.71
LRRC28-210ENST00000558879 WDR5P61964 334 aaKnown RBP19.46■□□□□ 0.71
LRRC28-210ENST00000558879 SP4Q02446 784 aa19.46■□□□□ 0.71
LRRC28-210ENST00000558879 MKRN4PQ13434 485 aaPredicted RBP19.46■□□□□ 0.71
LRRC28-210ENST00000558879 LMBR1Q8WVP7 490 aa19.46■□□□□ 0.71
LRRC28-210ENST00000558879 CRYGNQ8WXF5 182 aa19.46■□□□□ 0.71
LRRC28-210ENST00000558879 ATP6V0A1Q93050 837 aa19.46■□□□□ 0.71
LRRC28-210ENST00000558879 ZMYND12Q9H0C1 365 aa19.46■□□□□ 0.71
LRRC28-210ENST00000558879 SLC28A3Q9HAS3 691 aa19.46■□□□□ 0.71
LRRC28-210ENST00000558879 ZSWIM6Q9HCJ5 1215 aa19.46■□□□□ 0.71
LRRC28-210ENST00000558879 NAP1L2Q9ULW6 460 aaPredicted RBP19.46■□□□□ 0.71
LRRC28-210ENST00000558879 NFASCO94856 1347 aa19.46■□□□□ 0.71
LRRC28-210ENST00000558879 PRPF3O43395 683 aaKnown RBP19.45■□□□□ 0.7
LRRC28-210ENST00000558879 TOB2Q14106 344 aaPredicted RBP19.45■□□□□ 0.7
LRRC28-210ENST00000558879 UTP14CQ5TAP6 766 aaKnown RBP19.45■□□□□ 0.7
LRRC28-210ENST00000558879 ERICH6BQ5W0A0 696 aa19.45■□□□□ 0.7
LRRC28-210ENST00000558879 PPP2R2DQ66LE6 453 aa19.45■□□□□ 0.7
LRRC28-210ENST00000558879 RUFY3Q7L099 469 aa19.45■□□□□ 0.7
LRRC28-210ENST00000558879 HERC6Q8IVU3 1022 aa19.45■□□□□ 0.7
LRRC28-210ENST00000558879 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.45■□□□□ 0.7
LRRC28-210ENST00000558879 RNF26Q9BY78 433 aaPredicted RBP19.45■□□□□ 0.7
LRRC28-210ENST00000558879 PRDM12Q9H4Q4 367 aa19.45■□□□□ 0.7
LRRC28-210ENST00000558879 KCNH7Q9NS40 1196 aa19.45■□□□□ 0.7
LRRC28-210ENST00000558879 TMEM260Q9NX78 707 aa19.45■□□□□ 0.7
LRRC28-210ENST00000558879 PPP4R2Q9NY27 417 aa19.45■□□□□ 0.7
LRRC28-210ENST00000558879 KIAA1671Q9BY89 1806 aa19.44■□□□□ 0.7
LRRC28-210ENST00000558879 LGR5O75473 907 aa19.44■□□□□ 0.7
LRRC28-210ENST00000558879 CA3P07451 260 aa19.44■□□□□ 0.7
LRRC28-210ENST00000558879 CEP55Q53EZ4 464 aa19.44■□□□□ 0.7
LRRC28-210ENST00000558879 CYP2W1Q8TAV3 490 aa19.44■□□□□ 0.7
LRRC28-210ENST00000558879 SEPT1Q8WYJ6 367 aa19.44■□□□□ 0.7
LRRC28-210ENST00000558879 TM6SF1Q9BZW5 370 aa19.44■□□□□ 0.7
LRRC28-210ENST00000558879 JPH1Q9HDC5 661 aaPredicted RBP19.44■□□□□ 0.7
LRRC28-210ENST00000558879 SETD4Q9NVD3 440 aa19.44■□□□□ 0.7
LRRC28-210ENST00000558879 PKD2L1Q9P0L9 805 aa19.44■□□□□ 0.7
LRRC28-210ENST00000558879 NRCAMQ92823 1304 aa19.44■□□□□ 0.7
LRRC28-210ENST00000558879 PRRC2BQ5JSZ5 2229 aaKnown RBP19.44■□□□□ 0.7
LRRC28-210ENST00000558879 REV3LO60673 3130 aa19.44■□□□□ 0.7
LRRC28-210ENST00000558879 ADAMTS3O15072 1205 aa19.43■□□□□ 0.7
LRRC28-210ENST00000558879 GNAT1P11488 350 aa19.43■□□□□ 0.7
LRRC28-210ENST00000558879 IFNAR1P17181 557 aa19.43■□□□□ 0.7
LRRC28-210ENST00000558879 PDIA3P30101 505 aaKnown RBP19.43■□□□□ 0.7
LRRC28-210ENST00000558879 THPOP40225 353 aa19.43■□□□□ 0.7
LRRC28-210ENST00000558879 KCNJ6P48051 423 aa19.43■□□□□ 0.7
LRRC28-210ENST00000558879 DEFB103AP81534 67 aa19.43■□□□□ 0.7
LRRC28-210ENST00000558879 ARHGAP4P98171 946 aa19.43■□□□□ 0.7
LRRC28-210ENST00000558879 ADGRE1Q14246 886 aa19.43■□□□□ 0.7
LRRC28-210ENST00000558879 NIPA1Q7RTP0 329 aa19.43■□□□□ 0.7
LRRC28-210ENST00000558879 USP38Q8NB14 1042 aa19.43■□□□□ 0.7
LRRC28-210ENST00000558879 PHKBQ93100 1093 aa19.43■□□□□ 0.7
LRRC28-210ENST00000558879 PCYT2Q99447 389 aa19.43■□□□□ 0.7
LRRC28-210ENST00000558879 GAS2L1Q99501 681 aaPredicted RBP19.43■□□□□ 0.7
LRRC28-210ENST00000558879 ERAP1Q9NZ08 941 aa19.43■□□□□ 0.7
LRRC28-210ENST00000558879 SLC9A2Q9UBY0 812 aa19.43■□□□□ 0.7
LRRC28-210ENST00000558879 IGLV3-22A0A075B6J6 115 aa19.42■□□□□ 0.7
LRRC28-210ENST00000558879 ABHD14A-ACY1A0A1B0GW23 586 aa19.42■□□□□ 0.7
LRRC28-210ENST00000558879 RSPH10B2B2RC85 870 aa19.42■□□□□ 0.7
LRRC28-210ENST00000558879 RBAK-RBAKDNI3L0D1 243 aa19.42■□□□□ 0.7
LRRC28-210ENST00000558879 MEIS1O00470 390 aa19.42■□□□□ 0.7
LRRC28-210ENST00000558879 ARHGEF15O94989 841 aa19.42■□□□□ 0.7
LRRC28-210ENST00000558879 RSPH10BP0C881 870 aa19.42■□□□□ 0.7
LRRC28-210ENST00000558879 ARP10275 920 aa19.42■□□□□ 0.7
LRRC28-210ENST00000558879 ITGB3BPQ13352 177 aaPredicted RBP19.42■□□□□ 0.7
LRRC28-210ENST00000558879 CCDC12Q8WUD4 166 aaPredicted RBP19.42■□□□□ 0.7
LRRC28-210ENST00000558879 AGO4Q9HCK5 861 aaKnown RBP19.42■□□□□ 0.7
LRRC28-210ENST00000558879 TTC3P53804 2025 aa19.42■□□□□ 0.7
LRRC28-210ENST00000558879 CUL9Q8IWT3 2517 aa19.41■□□□□ 0.7
LRRC28-210ENST00000558879 MBLAC1A4D2B0 266 aaPredicted RBP19.41■□□□□ 0.7
LRRC28-210ENST00000558879 EFCAB14O75071 495 aa19.41■□□□□ 0.7
LRRC28-210ENST00000558879 CYP3A4P08684 503 aa19.41■□□□□ 0.7
LRRC28-210ENST00000558879 PLEKHG4Q58EX7 1191 aa19.41■□□□□ 0.7
LRRC28-210ENST00000558879 FAM26DQ5JW98 314 aa19.41■□□□□ 0.7
LRRC28-210ENST00000558879 RPAINQ86UA6 219 aa19.41■□□□□ 0.7
LRRC28-210ENST00000558879 SMARCAD1Q9H4L7 1026 aa19.41■□□□□ 0.7
LRRC28-210ENST00000558879 NCOA5Q9HCD5 579 aaKnown RBP19.41■□□□□ 0.7
LRRC28-210ENST00000558879 FAM86B1E9PN63 330 aa19.4■□□□□ 0.7
LRRC28-210ENST00000558879 FAM86B2P0C5J1 330 aa19.4■□□□□ 0.7
LRRC28-210ENST00000558879 PPFIA1Q13136 1202 aa19.4■□□□□ 0.7
LRRC28-210ENST00000558879 JAKMIP3Q5VZ66 844 aa19.4■□□□□ 0.7
LRRC28-210ENST00000558879 MCTP2Q6DN12 878 aa19.4■□□□□ 0.7
LRRC28-210ENST00000558879 REXO1Q8N1G1 1221 aaKnown RBP19.4■□□□□ 0.7
LRRC28-210ENST00000558879 CCDC148Q8NFR7 591 aa19.4■□□□□ 0.7
LRRC28-210ENST00000558879 SDF4Q9BRK5 362 aa19.4■□□□□ 0.7
LRRC28-210ENST00000558879 OSBPL7Q9BZF2 842 aa19.4■□□□□ 0.7
LRRC28-210ENST00000558879 C6orf50Q9HD87 102 aa19.4■□□□□ 0.7
LRRC28-210ENST00000558879 CYP46A1Q9Y6A2 500 aa19.4■□□□□ 0.7
LRRC28-210ENST00000558879 A0A0C4DFX4 3053 aa19.4■□□□□ 0.7
LRRC28-210ENST00000558879 ATG7O95352 703 aa19.39■□□□□ 0.69
LRRC28-210ENST00000558879 GJB5O95377 273 aa19.39■□□□□ 0.69
LRRC28-210ENST00000558879 CTSHP09668 335 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms