RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-208ENST00000558768 IL15P40933 162 aaPredicted RBP10.41□□□□□ -0.74
TRPM1-208ENST00000558768 GARSP41250 739 aaKnown RBP10.41□□□□□ -0.74
TRPM1-208ENST00000558768 DCUN1D2Q6PH85 259 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 RGS9BPQ6ZS82 235 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 RSAD2Q8WXG1 361 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 TMEM87BQ96K49 555 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 FAM161BQ96MY7 647 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 PPARGC1AQ9UBK2 798 aaKnown RBP10.41□□□□□ -0.74
TRPM1-208ENST00000558768 TULP4Q9NRJ4 1543 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 SASH1O94885 1247 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 TNNC2P02585 160 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 S100A5P33763 92 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 MKRN3Q13064 507 aaKnown RBP10.41□□□□□ -0.74
TRPM1-208ENST00000558768 WDR44Q5JSH3 913 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 RESP18Q5W5W9 173 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 MPRIPQ6WCQ1 1025 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 VAT1LQ9HCJ6 419 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 KCNJ18B7U540 433 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 CFLARO15519 480 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 VCAM1P19320 739 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 C4BPBP20851 252 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 COPB1P53618 953 aaKnown RBP10.41□□□□□ -0.74
TRPM1-208ENST00000558768 KCNJ12Q14500 433 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 RETREG2Q8NC44 543 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 C17orf50Q8WW18 174 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 QKIQ96PU8 341 aaKnown RBP eCLIP10.41□□□□□ -0.74
TRPM1-208ENST00000558768 UBXN6Q9BZV1 441 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 ZMYND12Q9H0C1 365 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 EPN3Q9H201 632 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 DCDC2Q9UHG0 476 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 PPME1Q9Y570 386 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 ABCC3O15438 1527 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 BUB1O43683 1085 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 MT-ND3P03897 115 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 HSPD1P10809 573 aaKnown RBP10.4□□□□□ -0.74
TRPM1-208ENST00000558768 TFAP4Q01664 338 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 NR1H3Q13133 447 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 ITGB3BPQ13352 177 aaPredicted RBP10.4□□□□□ -0.74
TRPM1-208ENST00000558768 KRT81Q14533 505 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 USPL1Q5W0Q7 1092 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 RUBCNQ92622 972 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 PBKQ96KB5 322 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 TRIM8Q9BZR9 551 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 BRD8Q9H0E9 1235 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 SLC40A1Q9NP59 571 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 SNRKQ9NRH2 765 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 PLAAQ9Y263 795 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 TMA7Q9Y2S6 64 aaKnown RBP10.4□□□□□ -0.74
TRPM1-208ENST00000558768 CDHR2Q9BYE9 1310 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 ANO9A1A5B4 782 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 CCDC188H7C350 402 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 GNA14O95837 355 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 GJA8P48165 433 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 EIF4A1P60842 406 aaKnown RBP10.4□□□□□ -0.74
TRPM1-208ENST00000558768 IFIT5Q13325 482 aaKnown RBP10.4□□□□□ -0.74
TRPM1-208ENST00000558768 CNGA3Q16281 694 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 CC2D2BQ6DHV5 1058 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 CCNI2Q6ZMN8 369 aaPredicted RBP10.4□□□□□ -0.74
TRPM1-208ENST00000558768 USHBP1Q8N6Y0 703 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 GIPC2Q8TF65 315 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 CCDC90BQ9GZT6 254 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 CABP5Q9NP86 173 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 MID2Q9UJV3 735 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 STRIP2Q9ULQ0 834 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 RASSF9O75901 435 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 AARSP49588 968 aaKnown RBP eCLIP10.4□□□□□ -0.74
TRPM1-208ENST00000558768 SMTNP53814 917 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 MRPS25P82663 173 aaKnown RBP10.4□□□□□ -0.74
TRPM1-208ENST00000558768 TBL3Q12788 808 aaKnown RBP10.4□□□□□ -0.74
TRPM1-208ENST00000558768 ADRM1Q16186 407 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 RINLQ6ZS11 566 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 NOSTRINQ8IVI9 506 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 KSR1Q8IVT5 923 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 NOA1Q8NC60 698 aaKnown RBP10.4□□□□□ -0.74
TRPM1-208ENST00000558768 RIN2Q8WYP3 895 aaPredicted RBP10.4□□□□□ -0.74
TRPM1-208ENST00000558768 SIRT1Q96EB6 747 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 GINS4Q9BRT9 223 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 IL1RAPL1Q9NZN1 696 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 BTBD7Q9P203 1132 aa10.4□□□□□ -0.74
TRPM1-208ENST00000558768 RTL9Q8NET4 1388 aa10.4□□□□□ -0.75
TRPM1-208ENST00000558768 WDR47O94967 919 aa10.4□□□□□ -0.75
TRPM1-208ENST00000558768 MAP3K10Q02779 954 aa10.4□□□□□ -0.75
TRPM1-208ENST00000558768 KBTBD12Q3ZCT8 623 aa10.4□□□□□ -0.75
TRPM1-208ENST00000558768 FSCBQ5H9T9 825 aa10.4□□□□□ -0.75
TRPM1-208ENST00000558768 ANKRD13DQ6ZTN6 518 aa10.4□□□□□ -0.75
TRPM1-208ENST00000558768 CCT8L2Q96SF2 557 aa10.4□□□□□ -0.75
TRPM1-208ENST00000558768 ATP6V0A4Q9HBG4 840 aa10.4□□□□□ -0.75
TRPM1-208ENST00000558768 BSDC1Q9NW68 430 aaPredicted RBP10.4□□□□□ -0.75
TRPM1-208ENST00000558768 ZNF839A8K0R7 811 aa10.39□□□□□ -0.75
TRPM1-208ENST00000558768 IPO5O00410 1097 aaKnown RBP10.39□□□□□ -0.75
TRPM1-208ENST00000558768 SLC5A1P13866 664 aa10.39□□□□□ -0.75
TRPM1-208ENST00000558768 SLCO1A2P46721 670 aa10.39□□□□□ -0.75
TRPM1-208ENST00000558768 NAPAP54920 295 aa10.39□□□□□ -0.75
TRPM1-208ENST00000558768 ZCWPW2Q504Y3 356 aa10.39□□□□□ -0.75
TRPM1-208ENST00000558768 RAD9BQ6WBX8 426 aa10.39□□□□□ -0.75
TRPM1-208ENST00000558768 IL17REQ8NFR9 667 aa10.39□□□□□ -0.75
TRPM1-208ENST00000558768 DDI1Q8WTU0 396 aa10.39□□□□□ -0.75
TRPM1-208ENST00000558768 ATP6V1G3Q96LB4 118 aa10.39□□□□□ -0.75
TRPM1-208ENST00000558768 NOD2Q9HC29 1040 aa10.39□□□□□ -0.75
TRPM1-208ENST00000558768 TLR7Q9NYK1 1049 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms