RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 MCM5P33992 734 aa9.29□□□□□ -0.92
TRAF3-205ENST00000558700 KCNJ6P48051 423 aa9.29□□□□□ -0.92
TRAF3-205ENST00000558700 USP46P62068 366 aa9.29□□□□□ -0.92
TRAF3-205ENST00000558700 KIAA0753Q2KHM9 967 aa9.29□□□□□ -0.92
TRAF3-205ENST00000558700 CELF3Q5SZQ8 465 aaKnown RBP9.29□□□□□ -0.92
TRAF3-205ENST00000558700 RNF20Q5VTR2 975 aa9.29□□□□□ -0.92
TRAF3-205ENST00000558700 CENPQQ7L2Z9 268 aaPredicted RBP9.29□□□□□ -0.92
TRAF3-205ENST00000558700 VSIG10LQ86VR7 867 aa9.29□□□□□ -0.92
TRAF3-205ENST00000558700 FCHSD1Q86WN1 690 aa9.29□□□□□ -0.92
TRAF3-205ENST00000558700 SMARCC2Q8TAQ2 1214 aa9.29□□□□□ -0.92
TRAF3-205ENST00000558700 PPP1R13LQ8WUF5 828 aa9.29□□□□□ -0.92
TRAF3-205ENST00000558700 KAT2BQ92831 832 aa9.29□□□□□ -0.92
TRAF3-205ENST00000558700 ALG1Q9BT22 464 aa9.29□□□□□ -0.92
TRAF3-205ENST00000558700 MYL10Q9BUA6 226 aa9.29□□□□□ -0.92
TRAF3-205ENST00000558700 TMEM134Q9H6X4 195 aa9.29□□□□□ -0.92
TRAF3-205ENST00000558700 ANO2Q9NQ90 1003 aa9.29□□□□□ -0.92
TRAF3-205ENST00000558700 GTF2IRD1Q9UHL9 959 aa9.29□□□□□ -0.92
TRAF3-205ENST00000558700 YBX2Q9Y2T7 364 aaKnown RBP9.29□□□□□ -0.92
TRAF3-205ENST00000558700 HAS3O00219 553 aa9.28□□□□□ -0.92
TRAF3-205ENST00000558700 NOP56O00567 594 aaKnown RBP9.28□□□□□ -0.92
TRAF3-205ENST00000558700 FIBPO43427 364 aa9.28□□□□□ -0.92
TRAF3-205ENST00000558700 PTK7Q13308 1070 aa9.28□□□□□ -0.92
TRAF3-205ENST00000558700 NEDD9Q14511 834 aa9.28□□□□□ -0.92
TRAF3-205ENST00000558700 HSDL1Q3SXM5 330 aa9.28□□□□□ -0.92
TRAF3-205ENST00000558700 CREB3L3Q68CJ9 461 aa9.28□□□□□ -0.92
TRAF3-205ENST00000558700 XRRA1Q6P2D8 792 aa9.28□□□□□ -0.92
TRAF3-205ENST00000558700 PHOSPHO2Q8TCD6 241 aa9.28□□□□□ -0.92
TRAF3-205ENST00000558700 PIBF1Q8WXW3 757 aa9.28□□□□□ -0.92
TRAF3-205ENST00000558700 TATDN2Q93075 761 aa9.28□□□□□ -0.92
TRAF3-205ENST00000558700 VWCEQ96DN2 955 aa9.28□□□□□ -0.92
TRAF3-205ENST00000558700 INPP4AQ96PE3 977 aaPredicted RBP9.28□□□□□ -0.92
TRAF3-205ENST00000558700 COL25A1Q9BXS0 654 aaPredicted RBP9.28□□□□□ -0.92
TRAF3-205ENST00000558700 MLXIPQ9HAP2 919 aa9.28□□□□□ -0.92
TRAF3-205ENST00000558700 HDAC6Q9UBN7 1215 aa9.28□□□□□ -0.92
TRAF3-205ENST00000558700 TET1Q8NFU7 2136 aa9.28□□□□□ -0.92
TRAF3-205ENST00000558700 MICAL3Q7RTP6 2002 aa9.27□□□□□ -0.92
TRAF3-205ENST00000558700 CHD9Q3L8U1 2897 aa9.27□□□□□ -0.92
TRAF3-205ENST00000558700 KIF28PB7ZC32 967 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 PIK3CDO00329 1044 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 SORBS3O60504 671 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 EFCAB14O75071 495 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 PPFIA4O75335 1185 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 PLEKHA8P1O95397 391 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 CKBP12277 381 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 COL9A1P20849 921 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 ICAM3P32942 547 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 LIFRP42702 1097 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 RABGGTBP53611 331 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 PCNX4Q63HM2 1172 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 CNKSR3Q6P9H4 555 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 METTL7BQ6UX53 244 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 SGMS1Q86VZ5 419 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 MICU3Q86XE3 530 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 DHX38Q92620 1227 aaKnown RBP9.27□□□□□ -0.93
TRAF3-205ENST00000558700 KHSRPQ92945 711 aaKnown RBP eCLIP9.27□□□□□ -0.93
TRAF3-205ENST00000558700 CTAGE1Q96RT6 745 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 THEGQ9P2T0 379 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 ZNF215Q9UL58 517 aaPredicted RBP9.27□□□□□ -0.93
TRAF3-205ENST00000558700 SLC12A7Q9Y666 1083 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 MYO9BQ13459 2157 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 EMSYQ7Z589 1322 aa9.27□□□□□ -0.93
TRAF3-205ENST00000558700 SIP14410 1827 aa9.26□□□□□ -0.93
TRAF3-205ENST00000558700 C17orf102A2RUQ5 167 aa9.26□□□□□ -0.93
TRAF3-205ENST00000558700 LGALS2P05162 132 aa9.26□□□□□ -0.93
TRAF3-205ENST00000558700 CA3P07451 260 aa9.26□□□□□ -0.93
TRAF3-205ENST00000558700 MYOGP15173 224 aa9.26□□□□□ -0.93
TRAF3-205ENST00000558700 RXRAP19793 462 aa9.26□□□□□ -0.93
TRAF3-205ENST00000558700 IGFBP4P22692 258 aa9.26□□□□□ -0.93
TRAF3-205ENST00000558700 MRPS9P82933 396 aaKnown RBP9.26□□□□□ -0.93
TRAF3-205ENST00000558700 SP2Q02086 613 aa9.26□□□□□ -0.93
TRAF3-205ENST00000558700 NECTIN1Q15223 517 aa9.26□□□□□ -0.93
TRAF3-205ENST00000558700 TMCO4Q5TGY1 634 aa9.26□□□□□ -0.93
TRAF3-205ENST00000558700 USP17L6PQ6QN14 398 aa9.26□□□□□ -0.93
TRAF3-205ENST00000558700 SYNE3Q6ZMZ3 975 aa9.26□□□□□ -0.93
TRAF3-205ENST00000558700 NLRX1Q86UT6 975 aa9.26□□□□□ -0.93
TRAF3-205ENST00000558700 HERC6Q8IVU3 1022 aa9.26□□□□□ -0.93
TRAF3-205ENST00000558700 USP38Q8NB14 1042 aa9.26□□□□□ -0.93
TRAF3-205ENST00000558700 SYMPKQ92797 1274 aaKnown RBP9.26□□□□□ -0.93
TRAF3-205ENST00000558700 GPKOWQ92917 476 aaPredicted RBP eCLIP9.26□□□□□ -0.93
TRAF3-205ENST00000558700 C16orf70Q9BSU1 422 aa9.26□□□□□ -0.93
TRAF3-205ENST00000558700 EHMT1Q9H9B1 1298 aa9.26□□□□□ -0.93
TRAF3-205ENST00000558700 UNC80Q8N2C7 3258 aa9.26□□□□□ -0.93
TRAF3-205ENST00000558700 ABHD14A-ACY1A0A1B0GW23 586 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 SPDYE3A6NKU9 549 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 POM121CA8CG34 1229 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 SPATA31C2B4DYI2 1134 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 H3BRB1 525 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 hCG_1984214I3L0E3 225 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 MEIS2O14770 477 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 TLL1O43897 1013 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 CAND2O75155 1236 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 CDC45O75419 566 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 CXCL10P02778 98 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 GNAT1P11488 350 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 HOXC8P31273 242 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 WDR5P61964 334 aaKnown RBP9.25□□□□□ -0.93
TRAF3-205ENST00000558700 ADGRE1Q14246 886 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 KRT32Q14532 448 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 TRIM71Q2Q1W2 868 aaKnown RBP9.25□□□□□ -0.93
TRAF3-205ENST00000558700 TJAP1Q5JTD0 557 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms