RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 ZSWIM2Q8NEG5 633 aa4.19□□□□□ -1.74
HERC1-203ENST00000558532 UHMK1Q8TAS1 419 aaKnown RBP4.19□□□□□ -1.74
HERC1-203ENST00000558532 PHOSPHO1Q8TCT1 267 aa4.19□□□□□ -1.74
HERC1-203ENST00000558532 SH3RF2Q8TEC5 729 aa4.19□□□□□ -1.74
HERC1-203ENST00000558532 SIN3AQ96ST3 1273 aa4.19□□□□□ -1.74
HERC1-203ENST00000558532 KCNJ15Q99712 375 aa4.19□□□□□ -1.74
HERC1-203ENST00000558532 ALG1Q9BT22 464 aa4.19□□□□□ -1.74
HERC1-203ENST00000558532 C11orf84Q9BUA3 381 aaPredicted RBP4.19□□□□□ -1.74
HERC1-203ENST00000558532 PIF1Q9H611 641 aa4.19□□□□□ -1.74
HERC1-203ENST00000558532 ZSWIM4Q9H7M6 989 aa4.19□□□□□ -1.74
HERC1-203ENST00000558532 PRKRIP1Q9H875 184 aaPredicted RBP4.19□□□□□ -1.74
HERC1-203ENST00000558532 KANSL2Q9H9L4 492 aa4.19□□□□□ -1.74
HERC1-203ENST00000558532 WASF3Q9UPY6 502 aa4.19□□□□□ -1.74
HERC1-203ENST00000558532 PCDHA8Q9Y5H6 950 aa4.19□□□□□ -1.74
HERC1-203ENST00000558532 HMGXB3Q12766 1538 aa4.19□□□□□ -1.74
HERC1-203ENST00000558532 NAIPQ13075 1403 aa4.19□□□□□ -1.74
HERC1-203ENST00000558532 CASKIN1Q8WXD9 1431 aa4.19□□□□□ -1.74
HERC1-203ENST00000558532 MIA2Q96PC5 1412 aa4.19□□□□□ -1.74
HERC1-203ENST00000558532 TCOF1Q13428 1488 aaKnown RBP4.18□□□□□ -1.74
HERC1-203ENST00000558532 FGD5Q6ZNL6 1462 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 INSRP06213 1382 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 CCDC7Q96M83 1385 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 KRTAP4-8A0A0G2JLE6 195 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.18□□□□□ -1.74
HERC1-203ENST00000558532 SH3D21A4FU49 640 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 FAM47E-STBD1D6RA91 191 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 KRIT1O00522 736 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 TCERG1O14776 1098 aaKnown RBP4.18□□□□□ -1.74
HERC1-203ENST00000558532 SLC27A2O14975 620 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 CRTAMO95727 393 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 LRG1P02750 347 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 LTFP02788 710 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 GNAT1P11488 350 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 ADAM9Q13443 819 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 SMAD4Q13485 552 aaKnown RBP4.18□□□□□ -1.74
HERC1-203ENST00000558532 SQSTM1Q13501 440 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 TEPPQ6URK8 271 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 LIPIQ6XZB0 460 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 STK32CQ86UX6 486 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 RBM12BQ8IXT5 1001 aaKnown RBP4.18□□□□□ -1.74
HERC1-203ENST00000558532 TTLL11Q8NHH1 800 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 PCDH19Q8TAB3 1148 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 SLC7A14Q8TBB6 771 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 CLEC4DQ8WXI8 215 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 ZBTB8AQ96BR9 441 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 TOE1Q96GM8 510 aaKnown RBP4.18□□□□□ -1.74
HERC1-203ENST00000558532 NUDCQ9Y266 331 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 SNAPC4Q5SXM2 1469 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 MBD5Q9P267 1494 aa4.18□□□□□ -1.74
HERC1-203ENST00000558532 LRPPRCP42704 1394 aaKnown RBP4.17□□□□□ -1.74
HERC1-203ENST00000558532 DHX29Q7Z478 1369 aaKnown RBP4.17□□□□□ -1.74
HERC1-203ENST00000558532 CTTNBP2Q8WZ74 1663 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 MAFKO60675 156 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 EIF5BO60841 1220 aaKnown RBP4.17□□□□□ -1.74
HERC1-203ENST00000558532 RASGRP1O95267 797 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 INHBBP09529 407 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 BMP7P18075 431 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 THBS2P35442 1172 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 EPHA5P54756 1037 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 SLURP1P55000 103 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 IRX6P78412 446 aaPredicted RBP4.17□□□□□ -1.74
HERC1-203ENST00000558532 GUCY1A3Q02108 690 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 SPIRE1Q08AE8 756 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 PAK1Q13153 545 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 TUSC3Q13454 348 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 RTP5Q14D33 572 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 PRR31Q5SQ13 230 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 TTLL10Q6ZVT0 673 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 ZC3H18Q86VM9 953 aaKnown RBP4.17□□□□□ -1.74
HERC1-203ENST00000558532 PROSER1Q86XN7 944 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 SYT8Q8NBV8 401 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 SH3TC2Q8TF17 1288 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 MRFAP1L1Q96HT8 127 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 SCLYQ96I15 445 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 MRPL4Q9BYD3 311 aaKnown RBP4.17□□□□□ -1.74
HERC1-203ENST00000558532 PDGFDQ9GZP0 370 aaPredicted RBP4.17□□□□□ -1.74
HERC1-203ENST00000558532 XYLT2Q9H1B5 865 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 NCOA5Q9HCD5 579 aaKnown RBP4.17□□□□□ -1.74
HERC1-203ENST00000558532 PARD6AQ9NPB6 346 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 LUC7LQ9NQ29 371 aaKnown RBP4.17□□□□□ -1.74
HERC1-203ENST00000558532 HSPBP1Q9NZL4 362 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 RBPJLQ9UBG7 517 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 NDOR1Q9UHB4 597 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 SFMBT1Q9UHJ3 866 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 CBLCQ9ULV8 474 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 PCDHA9Q9Y5H5 950 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 MYOM3Q5VTT5 1437 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 FMN1Q68DA7 1419 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 LRRIQ1Q96JM4 1722 aa4.17□□□□□ -1.74
HERC1-203ENST00000558532 EHBP1L1Q8N3D4 1523 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 SAMD9Q5K651 1589 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 PTPRKQ15262 1439 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 KCNQ2O43526 872 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 AMY2AP04746 511 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 CKMP06732 381 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 PYGMP11217 842 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 AMY2BP19961 511 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 NKX3-2P78367 333 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 GRIN1Q05586 938 aa4.16□□□□□ -1.74
HERC1-203ENST00000558532 KCTD1Q719H9 257 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms