RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 RSPH10B2B2RC85 870 aa13.62□□□□□ -0.23
HERC1-202ENST00000558324 PARNO95453 639 aaKnown RBP13.62□□□□□ -0.23
HERC1-202ENST00000558324 FOSP01100 380 aaPredicted RBP13.62□□□□□ -0.23
HERC1-202ENST00000558324 CXCL10P02778 98 aa13.62□□□□□ -0.23
HERC1-202ENST00000558324 RSPH10BP0C881 870 aa13.62□□□□□ -0.23
HERC1-202ENST00000558324 GNAT1P11488 350 aa13.62□□□□□ -0.23
HERC1-202ENST00000558324 HOXC8P31273 242 aa13.62□□□□□ -0.23
HERC1-202ENST00000558324 ZNF76P36508 570 aa13.62□□□□□ -0.23
HERC1-202ENST00000558324 DEFB103AP81534 67 aa13.62□□□□□ -0.23
HERC1-202ENST00000558324 USP38Q8NB14 1042 aa13.62□□□□□ -0.23
HERC1-202ENST00000558324 SEPT1Q8WYJ6 367 aa13.62□□□□□ -0.23
HERC1-202ENST00000558324 MXRA8Q9BRK3 442 aa13.62□□□□□ -0.23
HERC1-202ENST00000558324 NCOA5Q9HCD5 579 aaKnown RBP13.62□□□□□ -0.23
HERC1-202ENST00000558324 JPH1Q9HDC5 661 aaPredicted RBP13.62□□□□□ -0.23
HERC1-202ENST00000558324 KCNH7Q9NS40 1196 aa13.62□□□□□ -0.23
HERC1-202ENST00000558324 NID2Q14112 1375 aa13.61□□□□□ -0.23
HERC1-202ENST00000558324 DDX39AO00148 427 aaKnown RBP13.61□□□□□ -0.23
HERC1-202ENST00000558324 ADAMTS3O15072 1205 aa13.61□□□□□ -0.23
HERC1-202ENST00000558324 LGR5O75473 907 aa13.61□□□□□ -0.23
HERC1-202ENST00000558324 ARHGEF15O94989 841 aa13.61□□□□□ -0.23
HERC1-202ENST00000558324 ARP10275 920 aa13.61□□□□□ -0.23
HERC1-202ENST00000558324 CLK2P49760 499 aaKnown RBP13.61□□□□□ -0.23
HERC1-202ENST00000558324 AKAP17AQ02040 695 aaKnown RBP13.61□□□□□ -0.23
HERC1-202ENST00000558324 PPFIA1Q13136 1202 aa13.61□□□□□ -0.23
HERC1-202ENST00000558324 AP3B2Q13367 1082 aa13.61□□□□□ -0.23
HERC1-202ENST00000558324 ADGRE1Q14246 886 aa13.61□□□□□ -0.23
HERC1-202ENST00000558324 FAM117BQ6P1L5 589 aa13.61□□□□□ -0.23
HERC1-202ENST00000558324 RUFY3Q7L099 469 aa13.61□□□□□ -0.23
HERC1-202ENST00000558324 PHOSPHO2Q8TCD6 241 aa13.61□□□□□ -0.23
HERC1-202ENST00000558324 UIMC1Q96RL1 719 aa13.61□□□□□ -0.23
HERC1-202ENST00000558324 SDF4Q9BRK5 362 aa13.61□□□□□ -0.23
HERC1-202ENST00000558324 LARP6Q9BRS8 491 aaKnown RBP13.61□□□□□ -0.23
HERC1-202ENST00000558324 ZBED2Q9BTP6 218 aa13.61□□□□□ -0.23
HERC1-202ENST00000558324 SLC26A6Q9BXS9 759 aa13.61□□□□□ -0.23
HERC1-202ENST00000558324 UPF3BQ9BZI7 483 aaKnown RBP13.61□□□□□ -0.23
HERC1-202ENST00000558324 PPP4R2Q9NY27 417 aa13.61□□□□□ -0.23
HERC1-202ENST00000558324 TRIP12Q14669 1992 aaPredicted RBP13.61□□□□□ -0.23
HERC1-202ENST00000558324 KIF28PB7ZC32 967 aa13.6□□□□□ -0.23
HERC1-202ENST00000558324 TLL1O43897 1013 aa13.6□□□□□ -0.23
HERC1-202ENST00000558324 PDIA3P30101 505 aaKnown RBP13.6□□□□□ -0.23
HERC1-202ENST00000558324 SREBF1P36956 1147 aa13.6□□□□□ -0.23
HERC1-202ENST00000558324 IGBP1P78318 339 aa13.6□□□□□ -0.23
HERC1-202ENST00000558324 TOB2Q14106 344 aaPredicted RBP13.6□□□□□ -0.23
HERC1-202ENST00000558324 IKBKEQ14164 716 aa13.6□□□□□ -0.23
HERC1-202ENST00000558324 CCDC85BQ15834 202 aaPredicted RBP13.6□□□□□ -0.23
HERC1-202ENST00000558324 PKN1Q16512 942 aa13.6□□□□□ -0.23
HERC1-202ENST00000558324 CEP55Q53EZ4 464 aa13.6□□□□□ -0.23
HERC1-202ENST00000558324 REXO1Q8N1G1 1221 aaKnown RBP13.6□□□□□ -0.23
HERC1-202ENST00000558324 MICALL1Q8N3F8 863 aa13.6□□□□□ -0.23
HERC1-202ENST00000558324 RASGRP4Q8TDF6 673 aa13.6□□□□□ -0.23
HERC1-202ENST00000558324 AGXT2Q9BYV1 514 aa13.6□□□□□ -0.23
HERC1-202ENST00000558324 GLT8D2Q9H1C3 349 aa13.6□□□□□ -0.23
HERC1-202ENST00000558324 ZSWIM6Q9HCJ5 1215 aa13.6□□□□□ -0.23
HERC1-202ENST00000558324 AGO4Q9HCK5 861 aaKnown RBP13.6□□□□□ -0.23
HERC1-202ENST00000558324 C6orf50Q9HD87 102 aa13.6□□□□□ -0.23
HERC1-202ENST00000558324 ERAP1Q9NZ08 941 aa13.6□□□□□ -0.23
HERC1-202ENST00000558324 SLC9A2Q9UBY0 812 aa13.6□□□□□ -0.23
HERC1-202ENST00000558324 CYP46A1Q9Y6A2 500 aa13.6□□□□□ -0.23
HERC1-202ENST00000558324 EMSYQ7Z589 1322 aa13.6□□□□□ -0.23
HERC1-202ENST00000558324 TET1Q8NFU7 2136 aa13.6□□□□□ -0.23
HERC1-202ENST00000558324 ABHD14A-ACY1A0A1B0GW23 586 aa13.59□□□□□ -0.23
HERC1-202ENST00000558324 LCHNA4D1U4 455 aa13.59□□□□□ -0.23
HERC1-202ENST00000558324 RFXAPO00287 272 aa13.59□□□□□ -0.23
HERC1-202ENST00000558324 MAFGO15525 162 aa13.59□□□□□ -0.23
HERC1-202ENST00000558324 PRPF3O43395 683 aaKnown RBP13.59□□□□□ -0.23
HERC1-202ENST00000558324 ITGB3BPQ13352 177 aaPredicted RBP13.59□□□□□ -0.23
HERC1-202ENST00000558324 GRIK4Q16099 956 aa13.59□□□□□ -0.23
HERC1-202ENST00000558324 RUFY4Q6ZNE9 571 aa13.59□□□□□ -0.23
HERC1-202ENST00000558324 SPRED2Q7Z698 418 aa13.59□□□□□ -0.23
HERC1-202ENST00000558324 TEX2Q8IWB9 1127 aa13.59□□□□□ -0.23
HERC1-202ENST00000558324 FBXL16Q8N461 479 aa13.59□□□□□ -0.23
HERC1-202ENST00000558324 DBF4BQ8NFT6 615 aa13.59□□□□□ -0.23
HERC1-202ENST00000558324 CCDC12Q8WUD4 166 aaPredicted RBP13.59□□□□□ -0.23
HERC1-202ENST00000558324 ARNTL2Q8WYA1 636 aa13.59□□□□□ -0.23
HERC1-202ENST00000558324 ZBTB10Q96DT7 871 aa13.59□□□□□ -0.23
HERC1-202ENST00000558324 OSBPL7Q9BZF2 842 aa13.59□□□□□ -0.23
HERC1-202ENST00000558324 SMARCAD1Q9H4L7 1026 aa13.59□□□□□ -0.23
HERC1-202ENST00000558324 AZI2Q9H6S1 392 aa13.59□□□□□ -0.23
HERC1-202ENST00000558324 PRDM6Q9NQX0 595 aa13.59□□□□□ -0.23
HERC1-202ENST00000558324 VPS54Q9P1Q0 977 aa13.59□□□□□ -0.23
HERC1-202ENST00000558324 TUBE1Q9UJT0 475 aa13.59□□□□□ -0.23
HERC1-202ENST00000558324 NRCAMQ92823 1304 aa13.59□□□□□ -0.23
HERC1-202ENST00000558324 ESYT2A0FGR8 921 aa13.58□□□□□ -0.24
HERC1-202ENST00000558324 FAM86B1E9PN63 330 aa13.58□□□□□ -0.24
HERC1-202ENST00000558324 FAM86B2P0C5J1 330 aa13.58□□□□□ -0.24
HERC1-202ENST00000558324 ACTR2P61160 394 aa13.58□□□□□ -0.24
HERC1-202ENST00000558324 ADAM17P78536 824 aa13.58□□□□□ -0.24
HERC1-202ENST00000558324 TAP1Q03518 808 aa13.58□□□□□ -0.24
HERC1-202ENST00000558324 STK3Q13188 491 aa13.58□□□□□ -0.24
HERC1-202ENST00000558324 NTRK3Q16288 839 aa13.58□□□□□ -0.24
HERC1-202ENST00000558324 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.58□□□□□ -0.248e-9■□□□□ 8.9
HERC1-202ENST00000558324 PLA2G4DQ86XP0 818 aa13.58□□□□□ -0.24
HERC1-202ENST00000558324 MYOCDQ8IZQ8 938 aa13.58□□□□□ -0.24
HERC1-202ENST00000558324 PCYT2Q99447 389 aa13.58□□□□□ -0.24
HERC1-202ENST00000558324 RNF26Q9BY78 433 aaPredicted RBP13.58□□□□□ -0.24
HERC1-202ENST00000558324 ZMYND12Q9H0C1 365 aa13.58□□□□□ -0.24
HERC1-202ENST00000558324 TRPC6Q9Y210 931 aa13.58□□□□□ -0.24
HERC1-202ENST00000558324 PTPRSQ13332 1948 aa13.58□□□□□ -0.24
HERC1-202ENST00000558324 NFASCO94856 1347 aa13.58□□□□□ -0.24
HERC1-202ENST00000558324 UNC80Q8N2C7 3258 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms