RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 PPFIA3O75145 1194 aa14.12□□□□□ -0.15
CDC42BPB-202ENST00000558321 RSPH10BP0C881 870 aa14.12□□□□□ -0.15
CDC42BPB-202ENST00000558321 IKBKEQ14164 716 aa14.12□□□□□ -0.15
CDC42BPB-202ENST00000558321 TRIM71Q2Q1W2 868 aaKnown RBP14.12□□□□□ -0.15
CDC42BPB-202ENST00000558321 CEP55Q53EZ4 464 aa14.12□□□□□ -0.15
CDC42BPB-202ENST00000558321 PPP2R2DQ66LE6 453 aa14.12□□□□□ -0.15
CDC42BPB-202ENST00000558321 MCTP2Q6DN12 878 aa14.12□□□□□ -0.15
CDC42BPB-202ENST00000558321 CNKSR3Q6P9H4 555 aa14.12□□□□□ -0.15
CDC42BPB-202ENST00000558321 CYP2W1Q8TAV3 490 aa14.12□□□□□ -0.15
CDC42BPB-202ENST00000558321 ZBED2Q9BTP6 218 aa14.12□□□□□ -0.15
CDC42BPB-202ENST00000558321 SLC26A6Q9BXS9 759 aa14.12□□□□□ -0.15
CDC42BPB-202ENST00000558321 SMARCAD1Q9H4L7 1026 aa14.12□□□□□ -0.15
CDC42BPB-202ENST00000558321 NCOA5Q9HCD5 579 aaKnown RBP14.12□□□□□ -0.15
CDC42BPB-202ENST00000558321 JPH1Q9HDC5 661 aaPredicted RBP14.12□□□□□ -0.15
CDC42BPB-202ENST00000558321 KCNH7Q9NS40 1196 aa14.12□□□□□ -0.15
CDC42BPB-202ENST00000558321 ERAP1Q9NZ08 941 aa14.12□□□□□ -0.15
CDC42BPB-202ENST00000558321 LAMA2P24043 3122 aaKnown RBP14.12□□□□□ -0.15
CDC42BPB-202ENST00000558321 CXCL10P02778 98 aa14.11□□□□□ -0.15
CDC42BPB-202ENST00000558321 ARP10275 920 aa14.11□□□□□ -0.15
CDC42BPB-202ENST00000558321 IGFBP4P22692 258 aa14.11□□□□□ -0.15
CDC42BPB-202ENST00000558321 MARK3P27448 753 aa14.11□□□□□ -0.15
CDC42BPB-202ENST00000558321 GNA11P29992 359 aa14.11□□□□□ -0.15
CDC42BPB-202ENST00000558321 SREBF1P36956 1147 aa14.11□□□□□ -0.15
CDC42BPB-202ENST00000558321 CLK2P49760 499 aaKnown RBP14.11□□□□□ -0.15
CDC42BPB-202ENST00000558321 GPNMBQ14956 572 aa14.11□□□□□ -0.15
CDC42BPB-202ENST00000558321 HERC6Q8IVU3 1022 aa14.11□□□□□ -0.15
CDC42BPB-202ENST00000558321 LARP6Q9BRS8 491 aaKnown RBP14.11□□□□□ -0.15
CDC42BPB-202ENST00000558321 UPF3BQ9BZI7 483 aaKnown RBP14.11□□□□□ -0.15
CDC42BPB-202ENST00000558321 TM6SF1Q9BZW5 370 aa14.11□□□□□ -0.15
CDC42BPB-202ENST00000558321 AZI2Q9H6S1 392 aa14.11□□□□□ -0.15
CDC42BPB-202ENST00000558321 PDRG1Q9NUG6 133 aa14.11□□□□□ -0.15
CDC42BPB-202ENST00000558321 SLC9A2Q9UBY0 812 aa14.11□□□□□ -0.15
CDC42BPB-202ENST00000558321 EMSYQ7Z589 1322 aa14.11□□□□□ -0.15
CDC42BPB-202ENST00000558321 NRCAMQ92823 1304 aa14.11□□□□□ -0.15
CDC42BPB-202ENST00000558321 ABHD14A-ACY1A0A1B0GW23 586 aa14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 ESYT2A0FGR8 921 aa14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 MEIS1O00470 390 aa14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 CPLX1O14810 134 aa14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 TLL1O43897 1013 aa14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 EFCAB14O75071 495 aa14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 LGR5O75473 907 aa14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 CTSHP09668 335 aa14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 IFNAR1P17181 557 aa14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 WDR5P61964 334 aaKnown RBP14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 SSRP1Q08945 709 aaKnown RBP14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 PPFIA1Q13136 1202 aa14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 TOB2Q14106 344 aaPredicted RBP14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 PKN1Q16512 942 aa14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 TRIM22Q8IYM9 498 aa14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 REXO1Q8N1G1 1221 aaKnown RBP14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 BICD2Q8TD16 824 aa14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 LMBR1Q8WVP7 490 aa14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 PPM1EQ8WY54 764 aa14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 RNF26Q9BY78 433 aaPredicted RBP14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 ZMYND12Q9H0C1 365 aa14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 AGO4Q9HCK5 861 aaKnown RBP14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 SCN5AQ14524 2016 aa14.1□□□□□ -0.15
CDC42BPB-202ENST00000558321 NID2Q14112 1375 aa14.09□□□□□ -0.15
CDC42BPB-202ENST00000558321 CAND2O75155 1236 aa14.09□□□□□ -0.15
CDC42BPB-202ENST00000558321 CA3P07451 260 aa14.09□□□□□ -0.15
CDC42BPB-202ENST00000558321 HOXC8P31273 242 aa14.09□□□□□ -0.15
CDC42BPB-202ENST00000558321 EVCP57679 992 aa14.09□□□□□ -0.15
CDC42BPB-202ENST00000558321 NLRP5P59047 1200 aa14.09□□□□□ -0.15
CDC42BPB-202ENST00000558321 ACTR2P61160 394 aa14.09□□□□□ -0.15
CDC42BPB-202ENST00000558321 STK3Q13188 491 aa14.09□□□□□ -0.15
CDC42BPB-202ENST00000558321 NTRK3Q16288 839 aa14.09□□□□□ -0.15
CDC42BPB-202ENST00000558321 CPLX2Q6PUV4 134 aaKnown RBP14.09□□□□□ -0.15
CDC42BPB-202ENST00000558321 TRAF7Q6Q0C0 670 aa14.09□□□□□ -0.15
CDC42BPB-202ENST00000558321 NIPA1Q7RTP0 329 aa14.09□□□□□ -0.15
CDC42BPB-202ENST00000558321 PLA2G4DQ86XP0 818 aa14.09□□□□□ -0.15
CDC42BPB-202ENST00000558321 CCDC148Q8NFR7 591 aa14.09□□□□□ -0.15
CDC42BPB-202ENST00000558321 TNPO1Q92973 898 aaKnown RBP14.09□□□□□ -0.15
CDC42BPB-202ENST00000558321 ZNF274Q96GC6 653 aaPredicted RBP14.09□□□□□ -0.15
CDC42BPB-202ENST00000558321 VPS54Q9P1Q0 977 aa14.09□□□□□ -0.15
CDC42BPB-202ENST00000558321 NFASCO94856 1347 aa14.09□□□□□ -0.15
CDC42BPB-202ENST00000558321 DDX39AO00148 427 aaKnown RBP14.08□□□□□ -0.16
CDC42BPB-202ENST00000558321 DLL1O00548 723 aa14.08□□□□□ -0.16
CDC42BPB-202ENST00000558321 IGBP1P78318 339 aa14.08□□□□□ -0.16
CDC42BPB-202ENST00000558321 MBTPS1Q14703 1052 aa14.08□□□□□ -0.16
CDC42BPB-202ENST00000558321 GRIK4Q16099 956 aa14.08□□□□□ -0.16
CDC42BPB-202ENST00000558321 TMCO2Q7Z6W1 182 aaPredicted RBP14.08□□□□□ -0.16
CDC42BPB-202ENST00000558321 RSPH3Q86UC2 560 aa14.08□□□□□ -0.16
CDC42BPB-202ENST00000558321 DBF4BQ8NFT6 615 aa14.08□□□□□ -0.16
CDC42BPB-202ENST00000558321 SEPT8Q92599 483 aa14.08□□□□□ -0.16
CDC42BPB-202ENST00000558321 UIMC1Q96RL1 719 aa14.08□□□□□ -0.16
CDC42BPB-202ENST00000558321 CERS4Q9HA82 394 aa14.08□□□□□ -0.16
CDC42BPB-202ENST00000558321 TRPC6Q9Y210 931 aa14.08□□□□□ -0.16
CDC42BPB-202ENST00000558321 TRIP12Q14669 1992 aaPredicted RBP14.07□□□□□ -0.16
CDC42BPB-202ENST00000558321 RRN3P2A6NIE6 340 aa14.07□□□□□ -0.16
CDC42BPB-202ENST00000558321 FAM86B1E9PN63 330 aa14.07□□□□□ -0.16
CDC42BPB-202ENST00000558321 BACH1O14867 736 aa14.07□□□□□ -0.16
CDC42BPB-202ENST00000558321 ADAMTS3O15072 1205 aa14.07□□□□□ -0.16
CDC42BPB-202ENST00000558321 CYP3A4P08684 503 aa14.07□□□□□ -0.16
CDC42BPB-202ENST00000558321 FAM86B2P0C5J1 330 aa14.07□□□□□ -0.16
CDC42BPB-202ENST00000558321 STAT5BP51692 787 aa14.07□□□□□ -0.16
CDC42BPB-202ENST00000558321 ADAM17P78536 824 aa14.07□□□□□ -0.16
CDC42BPB-202ENST00000558321 DEFB103AP81534 67 aa14.07□□□□□ -0.16
CDC42BPB-202ENST00000558321 ITGB3BPQ13352 177 aaPredicted RBP14.07□□□□□ -0.16
CDC42BPB-202ENST00000558321 TCTN1Q2MV58 587 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms