RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 USP17L3A6NCW0 530 aa15.06■□□□□ 0
SPG11-210ENST00000558319 USP17L4A6NCW7 530 aa15.06■□□□□ 0
SPG11-210ENST00000558319 SCG2P13521 617 aa15.06■□□□□ 0
SPG11-210ENST00000558319 BASP1P80723 227 aaKnown RBP15.06■□□□□ 0
SPG11-210ENST00000558319 CTTNQ14247 550 aaKnown RBP15.06■□□□□ 0
SPG11-210ENST00000558319 IQCB1Q15051 598 aa15.06■□□□□ 0
SPG11-210ENST00000558319 USP17L1Q7RTZ2 530 aa15.06■□□□□ 0
SPG11-210ENST00000558319 MAPK13O15264 365 aa15.06■□□□□ 0
SPG11-210ENST00000558319 RAB44Q7Z6P3 723 aaPredicted RBP15.06■□□□□ 0
SPG11-210ENST00000558319 ZBED2Q9BTP6 218 aa15.06■□□□□ 0
SPG11-210ENST00000558319 STRIP2Q9ULQ0 834 aa15.06■□□□□ 0
SPG11-210ENST00000558319 PLAAQ9Y263 795 aa15.06■□□□□ 0
SPG11-210ENST00000558319 PRPSAP1Q14558 356 aa15.05■□□□□ 0
SPG11-210ENST00000558319 HOOK2Q96ED9 719 aa15.05■□□□□ 0
SPG11-210ENST00000558319 ITM2BQ9Y287 266 aa15.05■□□□□ 0
SPG11-210ENST00000558319 RAP1GDS1P52306 607 aa15.05■□□□□ 0
SPG11-210ENST00000558319 YWHAEP62258 255 aaKnown RBP15.05■□□□□ 0
SPG11-210ENST00000558319 FAM133AQ8N9E0 248 aa15.05■□□□□ 0
SPG11-210ENST00000558319 EAF2Q96CJ1 260 aaPredicted RBP15.05■□□□□ 0
SPG11-210ENST00000558319 ANKRD36BP1Q96IX9 119 aa15.05■□□□□ 0
SPG11-210ENST00000558319 ZNF804BA4D1E1 1349 aa15.05■□□□□ -0
SPG11-210ENST00000558319 LMNB1P20700 586 aa15.05■□□□□ -0
SPG11-210ENST00000558319 MAPK4P31152 587 aa15.05■□□□□ -0
SPG11-210ENST00000558319 LMNB2Q03252 620 aa15.05■□□□□ -0
SPG11-210ENST00000558319 MLXIPLQ9NP71 852 aa15.05■□□□□ -0
SPG11-210ENST00000558319 RASGRF2O14827 1237 aa15.05■□□□□ -0
SPG11-210ENST00000558319 ECEL1O95672 775 aa15.05■□□□□ -0
SPG11-210ENST00000558319 NSFP46459 744 aaKnown RBP15.05■□□□□ -0
SPG11-210ENST00000558319 FBXW4P57775 412 aa15.05■□□□□ -0
SPG11-210ENST00000558319 CCDC124Q96CT7 223 aaKnown RBP15.05■□□□□ -0
SPG11-210ENST00000558319 LMCD1Q9NZU5 365 aa15.05■□□□□ -0
SPG11-210ENST00000558319 PARD3Q8TEW0 1356 aa15.05■□□□□ -0
SPG11-210ENST00000558319 EXOC1LA0A1B0GW35 172 aa15.05■□□□□ -0
SPG11-210ENST00000558319 PI4K2BG5E9Z4 385 aa15.05■□□□□ -0
SPG11-210ENST00000558319 SOX5P35711 763 aa15.05■□□□□ -0
SPG11-210ENST00000558319 CCDC85BQ15834 202 aaPredicted RBP15.05■□□□□ -0
SPG11-210ENST00000558319 NBPF10Q6P3W6 841 aaKnown RBP15.05■□□□□ -0
SPG11-210ENST00000558319 PASD1Q8IV76 773 aa15.05■□□□□ -0
SPG11-210ENST00000558319 OSBPL1AQ9BXW6 950 aa15.05■□□□□ -0
SPG11-210ENST00000558319 UBE2TQ9NPD8 197 aaPredicted RBP15.05■□□□□ -0
SPG11-210ENST00000558319 PLEKHG3A1L390 1219 aa15.04■□□□□ -0
SPG11-210ENST00000558319 NFX1Q12986 1120 aaKnown RBP15.04■□□□□ -0
SPG11-210ENST00000558319 ZNF467Q7Z7K2 595 aaPredicted RBP15.04■□□□□ -0
SPG11-210ENST00000558319 ZNF710Q8N1W2 664 aa15.04■□□□□ -0
SPG11-210ENST00000558319 ENOX1Q8TC92 643 aaKnown RBP15.04■□□□□ -0
SPG11-210ENST00000558319 DEPDC1BQ8WUY9 529 aa15.04■□□□□ -0
SPG11-210ENST00000558319 CEP170P1Q96L14 293 aa15.04■□□□□ -0
SPG11-210ENST00000558319 HEXIM2Q96MH2 286 aaKnown RBP15.04■□□□□ -0
SPG11-210ENST00000558319 TRPV6Q9H1D0 765 aa15.04■□□□□ -0
SPG11-210ENST00000558319 ZMYM6O95789 1325 aa15.04■□□□□ -0
SPG11-210ENST00000558319 GTPBP6O43824 516 aaPredicted RBP15.04■□□□□ -0
SPG11-210ENST00000558319 OCA2Q04671 838 aa15.04■□□□□ -0
SPG11-210ENST00000558319 FAM160B1Q5W0V3 765 aa15.04■□□□□ -0
SPG11-210ENST00000558319 ATG16L1Q676U5 607 aa15.04■□□□□ -0
SPG11-210ENST00000558319 KRT27Q7Z3Y8 459 aa15.04■□□□□ -0
SPG11-210ENST00000558319 KCTD6Q8NC69 237 aa15.04■□□□□ -0
SPG11-210ENST00000558319 ZMYND12Q9H0C1 365 aa15.04■□□□□ -0
SPG11-210ENST00000558319 CNOT10Q9H9A5 744 aaKnown RBP15.04■□□□□ -0
SPG11-210ENST00000558319 SUCLA2Q9P2R7 463 aaPredicted RBP15.04■□□□□ -0
SPG11-210ENST00000558319 GYG2O15488 501 aa15.04■□□□□ -0
SPG11-210ENST00000558319 SUPT3HO75486 399 aa15.04■□□□□ -0
SPG11-210ENST00000558319 ADCK5Q3MIX3 580 aa15.04■□□□□ -0
SPG11-210ENST00000558319 OR6B2Q6IFH4 312 aa15.04■□□□□ -0
SPG11-210ENST00000558319 SPOPLQ6IQ16 392 aa15.04■□□□□ -0
SPG11-210ENST00000558319 SMIM5Q71RC9 77 aa15.04■□□□□ -0
SPG11-210ENST00000558319 KIAA2013Q8IYS2 634 aa15.04■□□□□ -0
SPG11-210ENST00000558319 FBXL13Q8NEE6 735 aa15.04■□□□□ -0
SPG11-210ENST00000558319 LZTS2Q9BRK4 669 aa15.04■□□□□ -0
SPG11-210ENST00000558319 SOS2Q07890 1332 aaPredicted RBP15.04■□□□□ -0
SPG11-210ENST00000558319 ZSCAN20P17040 1043 aaPredicted RBP15.04■□□□□ -0
SPG11-210ENST00000558319 CPVLQ9H3G5 476 aa15.04■□□□□ -0
SPG11-210ENST00000558319 GOLGA8QA0A0J9YX86 632 aa15.04■□□□□ -0
SPG11-210ENST00000558319 GOLGA8OA6NCC3 632 aa15.04■□□□□ -0
SPG11-210ENST00000558319 GOLGA8NF8WBI6 632 aa15.04■□□□□ -0
SPG11-210ENST00000558319 PIK3R2O00459 728 aa15.04■□□□□ -0
SPG11-210ENST00000558319 TNFAIP1Q13829 316 aa15.04■□□□□ -0
SPG11-210ENST00000558319 CCDC92Q53HC0 331 aaPredicted RBP15.04■□□□□ -0
SPG11-210ENST00000558319 DARS2Q6PI48 645 aaKnown RBP15.04■□□□□ -0
SPG11-210ENST00000558319 NRBP2Q9NSY0 501 aa15.04■□□□□ -0
SPG11-210ENST00000558319 PGRMC1O00264 195 aaKnown RBP15.03■□□□□ -0
SPG11-210ENST00000558319 SRGAP2O75044 1071 aa15.03■□□□□ -0
SPG11-210ENST00000558319 SLFN14P0C7P3 912 aa15.03■□□□□ -0
SPG11-210ENST00000558319 FLOT2Q14254 428 aa15.03■□□□□ -0
SPG11-210ENST00000558319 ARID5BQ14865 1188 aa15.03■□□□□ -0
SPG11-210ENST00000558319 FAM47EQ6ZV65 393 aa15.03■□□□□ -0
SPG11-210ENST00000558319 SLFN12Q8IYM2 578 aa15.03■□□□□ -0
SPG11-210ENST00000558319 CCDC90BQ9GZT6 254 aa15.03■□□□□ -0
SPG11-210ENST00000558319 NHEJ1Q9H9Q4 299 aaPredicted RBP15.03■□□□□ -0
SPG11-210ENST00000558319 SYCE1LA8MT33 242 aa15.03■□□□□ -0
SPG11-210ENST00000558319 KRT1P04264 644 aa15.03■□□□□ -0
SPG11-210ENST00000558319 ZFXP17010 805 aaPredicted RBP15.03■□□□□ -0
SPG11-210ENST00000558319 FAM186BQ8IYM0 893 aa15.03■□□□□ -0
SPG11-210ENST00000558319 NOC2LQ9Y3T9 749 aaKnown RBP15.03■□□□□ -0
SPG11-210ENST00000558319 PCDHA5Q9Y5H7 936 aa15.03■□□□□ -0
SPG11-210ENST00000558319 MYO1FO00160 1098 aa15.03■□□□□ -0
SPG11-210ENST00000558319 MMEP08473 750 aa15.03■□□□□ -0
SPG11-210ENST00000558319 EIF2AK2P19525 551 aaKnown RBP15.03■□□□□ -0
SPG11-210ENST00000558319 HPS4Q9NQG7 708 aa15.03■□□□□ -0
SPG11-210ENST00000558319 AOX1Q06278 1338 aa15.03■□□□□ -0
SPG11-210ENST00000558319 PRAG1Q86YV5 1406 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms