RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 SNRPB2P08579 225 aaKnown RBP5.28□□□□□ -1.56
LRRC28-205ENST00000558248 PLS3P13797 630 aa5.28□□□□□ -1.56
LRRC28-205ENST00000558248 PAX3P23760 479 aa5.28□□□□□ -1.56
LRRC28-205ENST00000558248 HOXC12P31275 282 aa5.28□□□□□ -1.56
LRRC28-205ENST00000558248 AMPD3Q01432 767 aa5.28□□□□□ -1.56
LRRC28-205ENST00000558248 TARBP2Q15633 366 aaKnown RBP5.28□□□□□ -1.56
LRRC28-205ENST00000558248 TCERG1LQ5VWI1 586 aa5.28□□□□□ -1.56
LRRC28-205ENST00000558248 DEFB132Q7Z7B7 95 aa5.28□□□□□ -1.56
LRRC28-205ENST00000558248 ZNF227Q86WZ6 799 aa5.28□□□□□ -1.56
LRRC28-205ENST00000558248 CILP2Q8IUL8 1156 aa5.28□□□□□ -1.56
LRRC28-205ENST00000558248 COPS5Q92905 334 aa5.28□□□□□ -1.56
LRRC28-205ENST00000558248 RNPC3Q96LT9 517 aaKnown RBP5.28□□□□□ -1.56
LRRC28-205ENST00000558248 CCDC140Q96MF4 163 aa5.28□□□□□ -1.56
LRRC28-205ENST00000558248 TRIM55Q9BYV6 548 aa5.28□□□□□ -1.56
LRRC28-205ENST00000558248 CNTD2Q9H8S5 307 aa5.28□□□□□ -1.56
LRRC28-205ENST00000558248 TCEAL9Q9UHQ7 104 aa5.28□□□□□ -1.56
LRRC28-205ENST00000558248 RWDD3Q9Y3V2 267 aa5.28□□□□□ -1.56
LRRC28-205ENST00000558248 COMMD10Q9Y6G5 202 aa5.28□□□□□ -1.56
LRRC28-205ENST00000558248 NCOA2Q15596 1464 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 GJB6O95452 261 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 CPP00450 1065 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 ITGAVP06756 1048 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 THBDP07204 575 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 PI3P19957 117 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 KCNJ6P48051 423 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 CDR1P51861 262 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 EPHB3P54753 998 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 ZNF200P98182 395 aaPredicted RBP5.27□□□□□ -1.57
LRRC28-205ENST00000558248 CDC42BPAQ5VT25 1732 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 FERMT3Q86UX7 667 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 LDHDQ86WU2 507 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 NME8Q8N427 588 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 NETO2Q8NC67 525 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 BTN2A2Q8WVV5 523 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 HNRNPLLQ8WVV9 542 aaKnown RBP5.27□□□□□ -1.57
LRRC28-205ENST00000558248 EVI5LQ96CN4 794 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 PEX11GQ96HA9 241 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 MRGPRX3Q96LB0 322 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 MMP19Q99542 508 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 MAF1Q9H063 256 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 GPRC5CQ9NQ84 441 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.27□□□□□ -1.57
LRRC28-205ENST00000558248 GULP1Q9UBP9 304 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 CFDP1Q9UEE9 299 aaPredicted RBP5.27□□□□□ -1.57
LRRC28-205ENST00000558248 INO80Q9ULG1 1556 aaPredicted RBP5.27□□□□□ -1.57
LRRC28-205ENST00000558248 KIAA1107Q9UPP5 1409 aa5.27□□□□□ -1.57
LRRC28-205ENST00000558248 ZNF644Q9H582 1327 aaPredicted RBP5.26□□□□□ -1.57
LRRC28-205ENST00000558248 FMN1Q68DA7 1419 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 C7orf72A4D263 438 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 GLI4P10075 376 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 ECI1P42126 302 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 PRR5P85299 388 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 KCNAB2Q13303 367 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 OS9Q13438 667 aaPredicted RBP5.26□□□□□ -1.57
LRRC28-205ENST00000558248 SLC9A5Q14940 896 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 DDR2Q16832 855 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 E4F1Q66K89 784 aaPredicted RBP5.26□□□□□ -1.57
LRRC28-205ENST00000558248 WWC2Q6AWC2 1192 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 LRP10Q7Z4F1 713 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 AMIGO3Q86WK7 504 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 C1QL4Q86Z23 238 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 GPATCH11Q8N954 259 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 APPBP2Q92624 585 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 RNF38Q9H0F5 515 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 ST7Q9NRC1 585 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 SNTG2Q9NY99 539 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 SHPRHQ149N8 1683 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 ADGBQ8N7X0 1667 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 PRDM15P57071 1507 aaPredicted RBP5.26□□□□□ -1.57
LRRC28-205ENST00000558248 GPATCH8Q9UKJ3 1502 aaKnown RBP5.26□□□□□ -1.57
LRRC28-205ENST00000558248 ARHGAP23Q9P227 1491 aa5.26□□□□□ -1.57
LRRC28-205ENST00000558248 CFAP65Q6ZU64 1925 aaKnown RBP5.25□□□□□ -1.57
LRRC28-205ENST00000558248 ZC3H12DA2A288 527 aaKnown RBP5.25□□□□□ -1.57
LRRC28-205ENST00000558248 IQCA1LA6NCM1 817 aa5.25□□□□□ -1.57
LRRC28-205ENST00000558248 MEFVO15553 781 aaPredicted RBP5.25□□□□□ -1.57
LRRC28-205ENST00000558248 BUB1BO60566 1050 aaPredicted RBP5.25□□□□□ -1.57
LRRC28-205ENST00000558248 ZBTB7AO95365 584 aa5.25□□□□□ -1.57
LRRC28-205ENST00000558248 FUCA1P04066 466 aa5.25□□□□□ -1.57
LRRC28-205ENST00000558248 GTF2A2P52657 109 aa5.25□□□□□ -1.57
LRRC28-205ENST00000558248 RPL11P62913 178 aaKnown RBP5.25□□□□□ -1.57
LRRC28-205ENST00000558248 HDAC1Q13547 482 aaPredicted RBP5.25□□□□□ -1.57
LRRC28-205ENST00000558248 UBE4AQ14139 1066 aa5.25□□□□□ -1.57
LRRC28-205ENST00000558248 SAFB2Q14151 953 aaKnown RBP eCLIP5.25□□□□□ -1.57
LRRC28-205ENST00000558248 SSPNQ14714 243 aa5.25□□□□□ -1.57
LRRC28-205ENST00000558248 SLC10A6Q3KNW5 377 aa5.25□□□□□ -1.57
LRRC28-205ENST00000558248 MRM1Q6IN84 353 aaKnown RBP5.25□□□□□ -1.57
LRRC28-205ENST00000558248 CNKSR3Q6P9H4 555 aa5.25□□□□□ -1.57
LRRC28-205ENST00000558248 HOMER1Q86YM7 354 aa5.25□□□□□ -1.57
LRRC28-205ENST00000558248 DCP2Q8IU60 420 aaKnown RBP5.25□□□□□ -1.57
LRRC28-205ENST00000558248 ALG3Q92685 438 aa5.25□□□□□ -1.57
LRRC28-205ENST00000558248 DIO2Q92813 273 aa5.25□□□□□ -1.57
LRRC28-205ENST00000558248 DEPDC7Q96QD5 511 aa5.25□□□□□ -1.57
LRRC28-205ENST00000558248 LGR4Q9BXB1 951 aa5.25□□□□□ -1.57
LRRC28-205ENST00000558248 AP5M1Q9H0R1 490 aa5.25□□□□□ -1.57
LRRC28-205ENST00000558248 GNL3LQ9NVN8 582 aaKnown RBP5.25□□□□□ -1.57
LRRC28-205ENST00000558248 FANCLQ9NW38 375 aa5.25□□□□□ -1.57
LRRC28-205ENST00000558248 BTG4Q9NY30 223 aa5.25□□□□□ -1.57
LRRC28-205ENST00000558248 MARCH2Q9P0N8 246 aa5.25□□□□□ -1.57
LRRC28-205ENST00000558248 LRP5O75197 1615 aa5.25□□□□□ -1.57
LRRC28-205ENST00000558248 UBR1Q8IWV7 1749 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms