RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 GRIN2DO15399 1336 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 NFASCO94856 1347 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 H3BQV1 296 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 MEIS1O00470 390 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 TDP2O95551 362 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 MMP1P03956 469 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 GNAT1P11488 350 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 ATP2B1P20020 1258 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 CCL23P55773 120 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 ACTR2P61160 394 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 ST3GAL1Q11201 340 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 NR5A1Q13285 461 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 BFSP2Q13515 415 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 LRCH2Q5VUJ6 765 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 FAM160B1Q5W0V3 765 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 MCTP1Q6DN14 999 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 TRMT1LQ7Z2T5 733 aaKnown RBP10.17□□□□□ -0.78
SPG11-207ENST00000558138 CKAP2LQ8IYA6 745 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 OXER1Q8TDS5 423 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 TNPO1Q92973 898 aaKnown RBP10.17□□□□□ -0.78
SPG11-207ENST00000558138 TEKT3Q9BXF9 490 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 SMARCAD1Q9H4L7 1026 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 TBC1D22BQ9NU19 505 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 ERAP1Q9NZ08 941 aa10.17□□□□□ -0.78
SPG11-207ENST00000558138 BTBD18B2RXH4 712 aa10.16□□□□□ -0.78
SPG11-207ENST00000558138 KIAA0355O15063 1070 aa10.16□□□□□ -0.78
SPG11-207ENST00000558138 CD2BP2O95400 341 aaKnown RBP10.16□□□□□ -0.78
SPG11-207ENST00000558138 BAG4O95429 457 aaKnown RBP10.16□□□□□ -0.78
SPG11-207ENST00000558138 TIMP1P01033 207 aa10.16□□□□□ -0.78
SPG11-207ENST00000558138 PSAPP07602 524 aa10.16□□□□□ -0.78
SPG11-207ENST00000558138 HSP90AA1P07900 732 aaKnown RBP10.16□□□□□ -0.78
SPG11-207ENST00000558138 SMIM10L2AP0DMW4 78 aa10.16□□□□□ -0.78
SPG11-207ENST00000558138 SMIM10L2BP0DMW5 78 aa10.16□□□□□ -0.78
SPG11-207ENST00000558138 GCFC2P16383 781 aaKnown RBP10.16□□□□□ -0.78
SPG11-207ENST00000558138 GJB2P29033 226 aa10.16□□□□□ -0.78
SPG11-207ENST00000558138 CIITAP33076 1130 aa10.16□□□□□ -0.78
SPG11-207ENST00000558138 CYP2C18P33260 490 aa10.16□□□□□ -0.78
SPG11-207ENST00000558138 IGBP1P78318 339 aa10.16□□□□□ -0.78
SPG11-207ENST00000558138 KRT76Q01546 638 aa10.16□□□□□ -0.78
SPG11-207ENST00000558138 ITGB3BPQ13352 177 aaPredicted RBP10.16□□□□□ -0.78
SPG11-207ENST00000558138 PPIGQ13427 754 aaKnown RBP eCLIP10.16□□□□□ -0.78
SPG11-207ENST00000558138 GDF6Q6KF10 455 aaPredicted RBP10.16□□□□□ -0.78
SPG11-207ENST00000558138 HSCBQ8IWL3 235 aa10.16□□□□□ -0.78
SPG11-207ENST00000558138 SLC43A3Q8NBI5 491 aa10.16□□□□□ -0.78
SPG11-207ENST00000558138 KAT2BQ92831 832 aa10.16□□□□□ -0.78
SPG11-207ENST00000558138 ATP6V0A1Q93050 837 aa10.16□□□□□ -0.78
SPG11-207ENST00000558138 C16orf70Q9BSU1 422 aa10.16□□□□□ -0.78
SPG11-207ENST00000558138 GTF2IRD1Q9UHL9 959 aa10.16□□□□□ -0.78
SPG11-207ENST00000558138 NOL7Q9UMY1 257 aaKnown RBP10.16□□□□□ -0.78
SPG11-207ENST00000558138 SCN10AQ9Y5Y9 1956 aa10.15□□□□□ -0.78
SPG11-207ENST00000558138 IGLV3-22A0A075B6J6 115 aa10.15□□□□□ -0.78
SPG11-207ENST00000558138 GSTTP1A0A1W2PQM5 241 aa10.15□□□□□ -0.78
SPG11-207ENST00000558138 M0R2N6 131 aa10.15□□□□□ -0.78
SPG11-207ENST00000558138 MSH4O15457 936 aa10.15□□□□□ -0.78
SPG11-207ENST00000558138 CD4P01730 458 aa10.15□□□□□ -0.78
SPG11-207ENST00000558138 STAT5BP51692 787 aa10.15□□□□□ -0.78
SPG11-207ENST00000558138 PPFIA1Q13136 1202 aa10.15□□□□□ -0.78
SPG11-207ENST00000558138 Q4G0T1 1027 aa10.15□□□□□ -0.78
SPG11-207ENST00000558138 MFSD5Q6N075 450 aa10.15□□□□□ -0.78
SPG11-207ENST00000558138 ZNF746Q6NUN9 644 aaPredicted RBP10.15□□□□□ -0.78
SPG11-207ENST00000558138 PDXDC2PQ6P474 469 aa10.15□□□□□ -0.78
SPG11-207ENST00000558138 MIER3Q7Z3K6 550 aa10.15□□□□□ -0.78
SPG11-207ENST00000558138 SMAP1Q8IYB5 467 aaPredicted RBP10.15□□□□□ -0.78
SPG11-207ENST00000558138 FTOQ9C0B1 505 aaKnown RBP eCLIP10.15□□□□□ -0.78
SPG11-207ENST00000558138 ZNF302Q9NR11 478 aa10.15□□□□□ -0.78
SPG11-207ENST00000558138 TBX21Q9UL17 535 aa10.15□□□□□ -0.78
SPG11-207ENST00000558138 TELO2Q9Y4R8 837 aa10.15□□□□□ -0.78
SPG11-207ENST00000558138 EMSYQ7Z589 1322 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 WDR64B1ANS9 1081 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 HAS3O00219 553 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 HOXD8P13378 290 aaPredicted RBP10.14□□□□□ -0.79
SPG11-207ENST00000558138 CSF2RAP15509 400 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 JAK3P52333 1124 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 ZNF200P98182 395 aaPredicted RBP10.14□□□□□ -0.79
SPG11-207ENST00000558138 NPY5RQ15761 445 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 CALCRLQ16602 461 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 SWSAP1Q6NVH7 229 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 MOXD1Q6UVY6 613 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 DEFB128Q7Z7B8 93 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 SESTD1Q86VW0 696 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 TDHQ8IZJ6 230 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 CAGE1Q8TC20 777 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 CRYGNQ8WXF5 182 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 GJA10Q969M2 543 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 SCLYQ96I15 445 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 RNPC3Q96LT9 517 aaKnown RBP10.14□□□□□ -0.79
SPG11-207ENST00000558138 GDF15Q99988 308 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 NOC4LQ9BVI4 516 aaKnown RBP10.14□□□□□ -0.79
SPG11-207ENST00000558138 MTIF3Q9H2K0 278 aaKnown RBP10.14□□□□□ -0.79
SPG11-207ENST00000558138 FOXD4L1Q9NU39 408 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 SETD4Q9NVD3 440 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 GABBR1Q9UBS5 961 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 PCDHA10Q9Y5I2 948 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 LTBP2Q14767 1821 aa10.14□□□□□ -0.79
SPG11-207ENST00000558138 UMODL1Q5DID0 1318 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 NRCAMQ92823 1304 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 POTEB3A0JP26 581 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 FAM205CA6NFA0 338 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 ZBBXA8MT70 800 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 SLC37A4O43826 429 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms