RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 PSMD10O75832 226 aa28.87■■■□□ 2.21
SMAD6-202ENST00000557916 F2P00734 622 aa28.87■■■□□ 2.21
SMAD6-202ENST00000557916 ZNF174Q15697 407 aa28.87■■■□□ 2.21
SMAD6-202ENST00000557916 ZNF746Q6NUN9 644 aaPredicted RBP28.87■■■□□ 2.21
SMAD6-202ENST00000557916 FERMT3Q86UX7 667 aa28.87■■■□□ 2.21
SMAD6-202ENST00000557916 DPF3Q92784 378 aa28.87■■■□□ 2.21
SMAD6-202ENST00000557916 HAS1Q92839 578 aa28.87■■■□□ 2.21
SMAD6-202ENST00000557916 ATG7O95352 703 aa28.86■■■□□ 2.21
SMAD6-202ENST00000557916 BAG4O95429 457 aaKnown RBP28.86■■■□□ 2.21
SMAD6-202ENST00000557916 PSEN2P49810 448 aa28.86■■■□□ 2.21
SMAD6-202ENST00000557916 TOB1P50616 345 aaPredicted RBP28.86■■■□□ 2.21
SMAD6-202ENST00000557916 RTP1P59025 263 aa28.86■■■□□ 2.21
SMAD6-202ENST00000557916 CALCRLQ16602 461 aa28.86■■■□□ 2.21
SMAD6-202ENST00000557916 NBPF20Q3BBV1 942 aa28.86■■■□□ 2.21
SMAD6-202ENST00000557916 KATNAL1Q9BW62 490 aa28.86■■■□□ 2.21
SMAD6-202ENST00000557916 MTMR6Q9Y217 621 aa28.86■■■□□ 2.21
SMAD6-202ENST00000557916 ATP11BQ9Y2G3 1177 aa28.86■■■□□ 2.21
SMAD6-202ENST00000557916 H3BRB1 525 aa28.86■■■□□ 2.21
SMAD6-202ENST00000557916 CDK7P50613 346 aa28.86■■■□□ 2.21
SMAD6-202ENST00000557916 ORC2Q13416 577 aaPredicted RBP28.86■■■□□ 2.21
SMAD6-202ENST00000557916 NBR1Q14596 966 aa28.86■■■□□ 2.21
SMAD6-202ENST00000557916 MFSD10Q14728 455 aa28.86■■■□□ 2.21
SMAD6-202ENST00000557916 TRIM60Q495X7 471 aa28.86■■■□□ 2.21
SMAD6-202ENST00000557916 RILPL1Q5EBL4 403 aa28.86■■■□□ 2.21
SMAD6-202ENST00000557916 ABHD15Q6UXT9 468 aa28.86■■■□□ 2.21
SMAD6-202ENST00000557916 BRAPQ7Z569 592 aa28.86■■■□□ 2.21
SMAD6-202ENST00000557916 TRIM50Q86XT4 487 aa28.86■■■□□ 2.21
SMAD6-202ENST00000557916 SMAP1Q8IYB5 467 aaPredicted RBP28.86■■■□□ 2.21
SMAD6-202ENST00000557916 SLC43A3Q8NBI5 491 aa28.86■■■□□ 2.21
SMAD6-202ENST00000557916 SEZ6LQ9BYH1 1024 aa28.86■■■□□ 2.21
SMAD6-202ENST00000557916 TUT1Q9H6E5 874 aaKnown RBP28.86■■■□□ 2.21
SMAD6-202ENST00000557916 CHMP2AO43633 222 aa28.85■■■□□ 2.21
SMAD6-202ENST00000557916 KIAA0753Q2KHM9 967 aa28.85■■■□□ 2.21
SMAD6-202ENST00000557916 MIS18BP1Q6P0N0 1132 aa28.85■■■□□ 2.21
SMAD6-202ENST00000557916 SLFN12Q8IYM2 578 aa28.85■■■□□ 2.21
SMAD6-202ENST00000557916 GLG1Q92896 1179 aa28.85■■■□□ 2.21
SMAD6-202ENST00000557916 UNC45AQ9H3U1 944 aa28.85■■■□□ 2.21
SMAD6-202ENST00000557916 HAS3O00219 553 aa28.84■■■□□ 2.21
SMAD6-202ENST00000557916 EVI5O60447 810 aa28.84■■■□□ 2.21
SMAD6-202ENST00000557916 LGR5O75473 907 aa28.84■■■□□ 2.21
SMAD6-202ENST00000557916 PPP1R13LQ8WUF5 828 aa28.84■■■□□ 2.21
SMAD6-202ENST00000557916 PCYT2Q99447 389 aa28.84■■■□□ 2.21
SMAD6-202ENST00000557916 SMARCAD1Q9H4L7 1026 aa28.84■■■□□ 2.21
SMAD6-202ENST00000557916 AZI2Q9H6S1 392 aa28.84■■■□□ 2.21
SMAD6-202ENST00000557916 ZNF215Q9UL58 517 aaPredicted RBP28.84■■■□□ 2.21
SMAD6-202ENST00000557916 SAMM50Q9Y512 469 aa28.84■■■□□ 2.21
SMAD6-202ENST00000557916 PCDHB6Q9Y5E3 794 aa28.84■■■□□ 2.21
SMAD6-202ENST00000557916 SCN10AQ9Y5Y9 1956 aa28.83■■■□□ 2.21
SMAD6-202ENST00000557916 WDR64B1ANS9 1081 aa28.83■■■□□ 2.21
SMAD6-202ENST00000557916 SUPT20HL2P0C7V6 817 aa28.83■■■□□ 2.21
SMAD6-202ENST00000557916 PDIA4P13667 645 aaKnown RBP28.83■■■□□ 2.21
SMAD6-202ENST00000557916 FAM47CQ5HY64 1035 aa28.83■■■□□ 2.21
SMAD6-202ENST00000557916 MTMR9Q96QG7 549 aa28.83■■■□□ 2.21
SMAD6-202ENST00000557916 TMEM60Q9H2L4 133 aa28.83■■■□□ 2.21
SMAD6-202ENST00000557916 PCDHA10Q9Y5I2 948 aa28.83■■■□□ 2.21
SMAD6-202ENST00000557916 MROH7Q68CQ1 1323 aa28.83■■■□□ 2.21
SMAD6-202ENST00000557916 EMSYQ7Z589 1322 aa28.83■■■□□ 2.21
SMAD6-202ENST00000557916 PQBP1O60828 265 aaKnown RBP28.82■■■□□ 2.2
SMAD6-202ENST00000557916 TLE2Q04725 743 aa28.82■■■□□ 2.2
SMAD6-202ENST00000557916 NFRKBQ6P4R8 1299 aa28.82■■■□□ 2.2
SMAD6-202ENST00000557916 B3GNT9Q6UX72 402 aa28.82■■■□□ 2.2
SMAD6-202ENST00000557916 ANKRD33Q7Z3H0 272 aa28.82■■■□□ 2.2
SMAD6-202ENST00000557916 DISC1Q9NRI5 854 aa28.82■■■□□ 2.2
SMAD6-202ENST00000557916 VAV3Q9UKW4 847 aa28.82■■■□□ 2.2
SMAD6-202ENST00000557916 IGKV6D-21A0A0A0MT36 114 aa28.81■■■□□ 2.2
SMAD6-202ENST00000557916 BACH1O14867 736 aa28.81■■■□□ 2.2
SMAD6-202ENST00000557916 PSAPP07602 524 aa28.81■■■□□ 2.2
SMAD6-202ENST00000557916 SFNP31947 248 aa28.81■■■□□ 2.2
SMAD6-202ENST00000557916 STAT5BP51692 787 aa28.81■■■□□ 2.2
SMAD6-202ENST00000557916 JAK3P52333 1124 aa28.81■■■□□ 2.2
SMAD6-202ENST00000557916 RESTQ13127 1097 aa28.81■■■□□ 2.2
SMAD6-202ENST00000557916 MIER3Q7Z3K6 550 aa28.81■■■□□ 2.2
SMAD6-202ENST00000557916 TOX2Q96NM4 488 aa28.81■■■□□ 2.2
SMAD6-202ENST00000557916 ERAP1Q9NZ08 941 aa28.81■■■□□ 2.2
SMAD6-202ENST00000557916 DCDC2CA8MYV0 355 aa28.8■■■□□ 2.2
SMAD6-202ENST00000557916 TXKP42681 527 aa28.8■■■□□ 2.2
SMAD6-202ENST00000557916 PTPN11Q06124 597 aaPredicted RBP28.8■■■□□ 2.2
SMAD6-202ENST00000557916 PPP2R5CQ13362 524 aa28.8■■■□□ 2.2
SMAD6-202ENST00000557916 FAM160B1Q5W0V3 765 aa28.8■■■□□ 2.2
SMAD6-202ENST00000557916 SWSAP1Q6NVH7 229 aa28.8■■■□□ 2.2
SMAD6-202ENST00000557916 PLPPR4Q7Z2D5 763 aa28.8■■■□□ 2.2
SMAD6-202ENST00000557916 C7orf61Q8IZ16 206 aa28.8■■■□□ 2.2
SMAD6-202ENST00000557916 C7orf31Q8N865 590 aa28.8■■■□□ 2.2
SMAD6-202ENST00000557916 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.8■■■□□ 2.2
SMAD6-202ENST00000557916 PCDHA12Q9UN75 941 aa28.8■■■□□ 2.2
SMAD6-202ENST00000557916 CCDC60Q8IWA6 550 aaPredicted RBP28.79■■■□□ 2.2
SMAD6-202ENST00000557916 RDM1Q8NG50 284 aa28.79■■■□□ 2.2
SMAD6-202ENST00000557916 ZSCAN16Q9H4T2 348 aaPredicted RBP28.79■■■□□ 2.2
SMAD6-202ENST00000557916 TTC12Q9H892 705 aaPredicted RBP28.79■■■□□ 2.2
SMAD6-202ENST00000557916 ZNF302Q9NR11 478 aa28.79■■■□□ 2.2
SMAD6-202ENST00000557916 HDAC6Q9UBN7 1215 aa28.79■■■□□ 2.2
SMAD6-202ENST00000557916 ALPK3Q96L96 1907 aa28.79■■■□□ 2.2
SMAD6-202ENST00000557916 OR52Z1P0C646 297 aa28.78■■■□□ 2.2
SMAD6-202ENST00000557916 MARK3P27448 753 aa28.78■■■□□ 2.2
SMAD6-202ENST00000557916 SESTD1Q86VW0 696 aa28.78■■■□□ 2.2
SMAD6-202ENST00000557916 FAM126BQ8IXS8 530 aa28.78■■■□□ 2.2
SMAD6-202ENST00000557916 C4orf32Q8N8J7 132 aa28.78■■■□□ 2.2
SMAD6-202ENST00000557916 AFAP1L1Q8TED9 768 aa28.78■■■□□ 2.2
SMAD6-202ENST00000557916 RNPEPQ9H4A4 650 aa28.78■■■□□ 2.2
SMAD6-202ENST00000557916 TLR3O15455 904 aaKnown RBP28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms