RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 SEPT14Q6ZU15 432 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 HSCBQ8IWL3 235 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 KLHDC9Q8NEP7 349 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 TBCKQ8TEA7 893 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 SCFD2Q8WU76 684 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 COPS5Q92905 334 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 WDR11Q9BZH6 1224 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 TMEM134Q9H6X4 195 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 JADE2Q9NQC1 790 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 RTEL1Q9NZ71 1219 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 FAM184BQ9ULE4 1060 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 SMC3Q9UQE7 1217 aa10.28□□□□□ -0.76
CHD8-214ENST00000557727 TNRC18O15417 2968 aaPredicted RBP10.27□□□□□ -0.76
CHD8-214ENST00000557727 B4DLN1 442 aa10.27□□□□□ -0.77
CHD8-214ENST00000557727 TDP2O95551 362 aa10.27□□□□□ -0.77
CHD8-214ENST00000557727 PGK1P00558 417 aa10.27□□□□□ -0.77
CHD8-214ENST00000557727 ARP10275 920 aa10.27□□□□□ -0.77
CHD8-214ENST00000557727 EN2P19622 333 aaPredicted RBP10.27□□□□□ -0.77
CHD8-214ENST00000557727 UBA1P22314 1058 aaKnown RBP10.27□□□□□ -0.77
CHD8-214ENST00000557727 CST5P28325 142 aaPredicted RBP10.27□□□□□ -0.77
CHD8-214ENST00000557727 USP11P51784 963 aa10.27□□□□□ -0.77
CHD8-214ENST00000557727 GJA9P57773 515 aa10.27□□□□□ -0.77
CHD8-214ENST00000557727 TNFAIP2Q03169 654 aa10.27□□□□□ -0.77
CHD8-214ENST00000557727 ITGB3BPQ13352 177 aaPredicted RBP10.27□□□□□ -0.77
CHD8-214ENST00000557727 LY6KQ17RY6 165 aa10.27□□□□□ -0.77
CHD8-214ENST00000557727 INF2Q27J81 1249 aa10.27□□□□□ -0.77
CHD8-214ENST00000557727 CEP55Q53EZ4 464 aa10.27□□□□□ -0.77
CHD8-214ENST00000557727 PIK3AP1Q6ZUJ8 805 aa10.27□□□□□ -0.77
CHD8-214ENST00000557727 NIPA1Q7RTP0 329 aa10.27□□□□□ -0.77
CHD8-214ENST00000557727 KRT25Q7Z3Z0 450 aa10.27□□□□□ -0.77
CHD8-214ENST00000557727 FAM184AQ8NB25 1140 aa10.27□□□□□ -0.77
CHD8-214ENST00000557727 EMID1Q96A84 441 aaPredicted RBP10.27□□□□□ -0.77
CHD8-214ENST00000557727 GPRASP2Q96D09 838 aa10.27□□□□□ -0.77
CHD8-214ENST00000557727 MXRA8Q9BRK3 442 aa10.27□□□□□ -0.77
CHD8-214ENST00000557727 FOXP1Q9H334 677 aaPredicted RBP10.27□□□□□ -0.77
CHD8-214ENST00000557727 Q9Y3F1 56 aa10.27□□□□□ -0.77
CHD8-214ENST00000557727 ADGRG1Q9Y653 693 aa10.27□□□□□ -0.77
CHD8-214ENST00000557727 DHX15O43143 795 aaKnown RBP10.26□□□□□ -0.77
CHD8-214ENST00000557727 FIBPO43427 364 aa10.26□□□□□ -0.77
CHD8-214ENST00000557727 SLC37A4O43826 429 aa10.26□□□□□ -0.77
CHD8-214ENST00000557727 MSCO60682 206 aa10.26□□□□□ -0.77
CHD8-214ENST00000557727 TXNP10599 105 aaKnown RBP10.26□□□□□ -0.77
CHD8-214ENST00000557727 TGFB3P10600 412 aa10.26□□□□□ -0.77
CHD8-214ENST00000557727 COL6A1P12109 1028 aa10.26□□□□□ -0.77
CHD8-214ENST00000557727 HOXD8P13378 290 aaPredicted RBP10.26□□□□□ -0.77
CHD8-214ENST00000557727 SYT1P21579 422 aa10.26□□□□□ -0.77
CHD8-214ENST00000557727 CNGA1P29973 690 aa10.26□□□□□ -0.77
CHD8-214ENST00000557727 TOB1P50616 345 aaPredicted RBP10.26□□□□□ -0.77
CHD8-214ENST00000557727 TTLL4Q14679 1199 aa10.26□□□□□ -0.77
CHD8-214ENST00000557727 NONOQ15233 471 aaKnown RBP eCLIP10.26□□□□□ -0.77
CHD8-214ENST00000557727 LRRC41Q15345 812 aa10.26□□□□□ -0.77
CHD8-214ENST00000557727 MYSM1Q5VVJ2 828 aa10.26□□□□□ -0.77
CHD8-214ENST00000557727 MOXD1Q6UVY6 613 aa10.26□□□□□ -0.77
CHD8-214ENST00000557727 TLK2Q86UE8 772 aa10.26□□□□□ -0.77
CHD8-214ENST00000557727 DIS3LQ8TF46 1054 aaKnown RBP10.26□□□□□ -0.77
CHD8-214ENST00000557727 MPHOSPH6Q99547 160 aaKnown RBP10.26□□□□□ -0.77
CHD8-214ENST00000557727 EHMT1Q9H9B1 1298 aa10.26□□□□□ -0.77
CHD8-214ENST00000557727 AGO4Q9HCK5 861 aaKnown RBP10.26□□□□□ -0.77
CHD8-214ENST00000557727 XPNPEP3Q9NQH7 507 aa10.26□□□□□ -0.77
CHD8-214ENST00000557727 KCNH7Q9NS40 1196 aa10.26□□□□□ -0.77
CHD8-214ENST00000557727 MTMR6Q9Y217 621 aa10.26□□□□□ -0.77
CHD8-214ENST00000557727 KAT6AQ92794 2004 aa10.25□□□□□ -0.77
CHD8-214ENST00000557727 CCDC194A0A1B0GVG4 234 aa10.25□□□□□ -0.77
CHD8-214ENST00000557727 A6NJR5 290 aa10.25□□□□□ -0.77
CHD8-214ENST00000557727 NKRFO15226 690 aaKnown RBP eCLIP10.25□□□□□ -0.77
CHD8-214ENST00000557727 FARP2O94887 1054 aaPredicted RBP10.25□□□□□ -0.77
CHD8-214ENST00000557727 RARBP10826 455 aa10.25□□□□□ -0.77
CHD8-214ENST00000557727 DDIT3P35638 169 aa10.25□□□□□ -0.77
CHD8-214ENST00000557727 SOX10P56693 466 aa10.25□□□□□ -0.77
CHD8-214ENST00000557727 MTMR1Q13613 665 aa10.25□□□□□ -0.77
CHD8-214ENST00000557727 PKP1Q13835 747 aa10.25□□□□□ -0.77
CHD8-214ENST00000557727 TRIM29Q14134 588 aa10.25□□□□□ -0.77
CHD8-214ENST00000557727 Q4G0T1 1027 aa10.25□□□□□ -0.77
CHD8-214ENST00000557727 CELF3Q5SZQ8 465 aaKnown RBP10.25□□□□□ -0.77
CHD8-214ENST00000557727 LARP1BQ659C4 914 aaKnown RBP10.25□□□□□ -0.77
CHD8-214ENST00000557727 BLOC1S3Q6QNY0 202 aa10.25□□□□□ -0.77
CHD8-214ENST00000557727 NOSTRINQ8IVI9 506 aa10.25□□□□□ -0.77
CHD8-214ENST00000557727 ETNPPLQ8TBG4 499 aa10.25□□□□□ -0.77
CHD8-214ENST00000557727 SENP7Q9BQF6 1050 aa10.25□□□□□ -0.77
CHD8-214ENST00000557727 MRVI1Q9Y6F6 885 aa10.25□□□□□ -0.77
CHD8-214ENST00000557727 ARID2Q68CP9 1835 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 CCDC85CA6NKD9 419 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 MSH4O15457 936 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 MAFGO15525 162 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 GGPS1O95749 300 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 CCNE2O96020 404 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 BEX3Q00994 111 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 RESTQ13127 1097 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 HSDL1Q3SXM5 330 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 GNPTABQ3T906 1256 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 PRR16Q569H4 304 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 PPP4R3AQ6IN85 833 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 KCNV1Q6PIU1 500 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 METTL7BQ6UX53 244 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 B3GNT9Q6UX72 402 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 NEK8Q86SG6 692 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 PLA2G4DQ86XP0 818 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 ANKLE1Q8NAG6 615 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 HAS1Q92839 578 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 SLC5A5Q92911 643 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms