RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 MYH15Q9Y2K3 1946 aa17.23■□□□□ 0.35
NEDD1-213ENST00000557644 LAD1O00515 517 aa17.23■□□□□ 0.35
NEDD1-213ENST00000557644 TCF7P36402 384 aaPredicted RBP17.23■□□□□ 0.35
NEDD1-213ENST00000557644 CPT1AP50416 773 aa17.23■□□□□ 0.35
NEDD1-213ENST00000557644 NKX3-2P78367 333 aa17.23■□□□□ 0.35
NEDD1-213ENST00000557644 KRT76Q01546 638 aa17.23■□□□□ 0.35
NEDD1-213ENST00000557644 PPP2R5CQ13362 524 aa17.23■□□□□ 0.35
NEDD1-213ENST00000557644 SLC39A14Q15043 492 aa17.23■□□□□ 0.35
NEDD1-213ENST00000557644 KCNA10Q16322 511 aa17.23■□□□□ 0.35
NEDD1-213ENST00000557644 CCSAPQ6IQ19 270 aaPredicted RBP17.23■□□□□ 0.35
NEDD1-213ENST00000557644 ZNF746Q6NUN9 644 aaPredicted RBP17.23■□□□□ 0.35
NEDD1-213ENST00000557644 RNF180Q86T96 592 aa17.23■□□□□ 0.35
NEDD1-213ENST00000557644 TRIM50Q86XT4 487 aa17.23■□□□□ 0.35
NEDD1-213ENST00000557644 TNS4Q8IZW8 715 aa17.23■□□□□ 0.35
NEDD1-213ENST00000557644 SAMM50Q9Y512 469 aa17.23■□□□□ 0.35
NEDD1-213ENST00000557644 ELP1O95163 1332 aa17.22■□□□□ 0.35
NEDD1-213ENST00000557644 FRMPD3Q5JV73 1810 aa17.22■□□□□ 0.35
NEDD1-213ENST00000557644 ZNF286BP0CG31 522 aa17.22■□□□□ 0.35
NEDD1-213ENST00000557644 STK38Q15208 465 aa17.22■□□□□ 0.35
NEDD1-213ENST00000557644 NCAPH2Q6IBW4 605 aa17.22■□□□□ 0.35
NEDD1-213ENST00000557644 SEPT1Q8WYJ6 367 aa17.22■□□□□ 0.35
NEDD1-213ENST00000557644 VWA3AA6NCI4 1184 aa17.22■□□□□ 0.35
NEDD1-213ENST00000557644 BMP15O95972 392 aa17.22■□□□□ 0.35
NEDD1-213ENST00000557644 PRPHP41219 470 aa17.22■□□□□ 0.35
NEDD1-213ENST00000557644 UTP14CQ5TAP6 766 aaKnown RBP17.22■□□□□ 0.35
NEDD1-213ENST00000557644 ABHD15Q6UXT9 468 aa17.22■□□□□ 0.35
NEDD1-213ENST00000557644 DTHD1Q6ZMT9 781 aa17.22■□□□□ 0.35
NEDD1-213ENST00000557644 TNPO1Q92973 898 aaKnown RBP17.22■□□□□ 0.35
NEDD1-213ENST00000557644 GDPD2Q9HCC8 539 aa17.22■□□□□ 0.35
NEDD1-213ENST00000557644 DISC1Q9NRI5 854 aa17.22■□□□□ 0.35
NEDD1-213ENST00000557644 TCEAL9Q9UHQ7 104 aa17.22■□□□□ 0.35
NEDD1-213ENST00000557644 CFAP45Q9UL16 551 aa17.22■□□□□ 0.35
NEDD1-213ENST00000557644 ASGR1P07306 291 aa17.21■□□□□ 0.35
NEDD1-213ENST00000557644 MYL3P08590 195 aa17.21■□□□□ 0.35
NEDD1-213ENST00000557644 CST5P28325 142 aaPredicted RBP17.21■□□□□ 0.35
NEDD1-213ENST00000557644 MNX1P50219 401 aaPredicted RBP17.21■□□□□ 0.35
NEDD1-213ENST00000557644 KRT85P78386 507 aa17.21■□□□□ 0.35
NEDD1-213ENST00000557644 DGKDQ16760 1214 aa17.21■□□□□ 0.35
NEDD1-213ENST00000557644 ARL6IP4Q66PJ3 421 aaKnown RBP17.21■□□□□ 0.35
NEDD1-213ENST00000557644 ATL3Q6DD88 541 aa17.21■□□□□ 0.35
NEDD1-213ENST00000557644 CXCL17Q6UXB2 119 aa17.21■□□□□ 0.35
NEDD1-213ENST00000557644 ARRDC4Q8NCT1 418 aa17.21■□□□□ 0.35
NEDD1-213ENST00000557644 PCYT2Q99447 389 aa17.21■□□□□ 0.35
NEDD1-213ENST00000557644 WDR64B1ANS9 1081 aa17.21■□□□□ 0.34
NEDD1-213ENST00000557644 PPFIA4O75335 1185 aa17.21■□□□□ 0.34
NEDD1-213ENST00000557644 ATG7O95352 703 aa17.21■□□□□ 0.34
NEDD1-213ENST00000557644 HOXD8P13378 290 aaPredicted RBP17.21■□□□□ 0.34
NEDD1-213ENST00000557644 EN2P19622 333 aaPredicted RBP17.21■□□□□ 0.34
NEDD1-213ENST00000557644 CDC25AP30304 524 aa17.21■□□□□ 0.34
NEDD1-213ENST00000557644 FXR2P51116 673 aaKnown RBP eCLIP17.21■□□□□ 0.34
NEDD1-213ENST00000557644 MIER3Q7Z3K6 550 aa17.21■□□□□ 0.34
NEDD1-213ENST00000557644 CCDC60Q8IWA6 550 aaPredicted RBP17.21■□□□□ 0.34
NEDD1-213ENST00000557644 CLIC6Q96NY7 704 aa17.21■□□□□ 0.34
NEDD1-213ENST00000557644 PCDHA10Q9Y5I2 948 aa17.21■□□□□ 0.34
NEDD1-213ENST00000557644 PP2D1A8MPX8 630 aa17.2■□□□□ 0.34
NEDD1-213ENST00000557644 SPTLC2O15270 562 aa17.2■□□□□ 0.34
NEDD1-213ENST00000557644 YEATS4O95619 227 aa17.2■□□□□ 0.34
NEDD1-213ENST00000557644 LGALS2P05162 132 aa17.2■□□□□ 0.34
NEDD1-213ENST00000557644 SUPT20HL2P0C7V6 817 aa17.2■□□□□ 0.34
NEDD1-213ENST00000557644 BRDTQ58F21 947 aaPredicted RBP17.2■□□□□ 0.34
NEDD1-213ENST00000557644 SMAP1Q8IYB5 467 aaPredicted RBP17.2■□□□□ 0.34
NEDD1-213ENST00000557644 DIS3LQ8TF46 1054 aaKnown RBP17.2■□□□□ 0.34
NEDD1-213ENST00000557644 PPP1R13LQ8WUF5 828 aa17.2■□□□□ 0.34
NEDD1-213ENST00000557644 FBXO2Q9UK22 296 aaPredicted RBP17.2■□□□□ 0.34
NEDD1-213ENST00000557644 ACLYP53396 1101 aa17.2■□□□□ 0.34
NEDD1-213ENST00000557644 PURAQ00577 322 aaKnown RBP17.2■□□□□ 0.34
NEDD1-213ENST00000557644 TMEM266Q2M3C6 531 aa17.2■□□□□ 0.34
NEDD1-213ENST00000557644 SWSAP1Q6NVH7 229 aa17.2■□□□□ 0.34
NEDD1-213ENST00000557644 IGSF22Q8N9C0 903 aa17.2■□□□□ 0.34
NEDD1-213ENST00000557644 FERMT2Q96AC1 680 aa17.2■□□□□ 0.34
NEDD1-213ENST00000557644 C16orf70Q9BSU1 422 aa17.2■□□□□ 0.34
NEDD1-213ENST00000557644 DNM1LO00429 736 aa17.19■□□□□ 0.34
NEDD1-213ENST00000557644 BACH1O14867 736 aa17.19■□□□□ 0.34
NEDD1-213ENST00000557644 JAK3P52333 1124 aa17.19■□□□□ 0.34
NEDD1-213ENST00000557644 UGCGQ16739 394 aa17.19■□□□□ 0.34
NEDD1-213ENST00000557644 SPECC1Q5M775 1068 aa17.19■□□□□ 0.34
NEDD1-213ENST00000557644 MIS18BP1Q6P0N0 1132 aa17.19■□□□□ 0.34
NEDD1-213ENST00000557644 PCSK9Q8NBP7 692 aaKnown RBP17.19■□□□□ 0.34
NEDD1-213ENST00000557644 LEO1Q8WVC0 666 aaPredicted RBP17.19■□□□□ 0.34
NEDD1-213ENST00000557644 KAT2BQ92831 832 aa17.19■□□□□ 0.34
NEDD1-213ENST00000557644 RGL1Q9NZL6 768 aa17.19■□□□□ 0.34
NEDD1-213ENST00000557644 RCOR1Q9UKL0 485 aa17.19■□□□□ 0.34
NEDD1-213ENST00000557644 IGKV6D-21A0A0A0MT36 114 aa17.18■□□□□ 0.34
NEDD1-213ENST00000557644 CCDC85CA6NKD9 419 aa17.18■□□□□ 0.34
NEDD1-213ENST00000557644 KBTBD13C9JR72 458 aa17.18■□□□□ 0.34
NEDD1-213ENST00000557644 SFNP31947 248 aa17.18■□□□□ 0.34
NEDD1-213ENST00000557644 CHMP4BP1P59074 171 aa17.18■□□□□ 0.34
NEDD1-213ENST00000557644 CYP4A11Q02928 519 aa17.18■□□□□ 0.34
NEDD1-213ENST00000557644 TRMT1LQ7Z2T5 733 aaKnown RBP17.18■□□□□ 0.34
NEDD1-213ENST00000557644 BANK1Q8NDB2 785 aa17.18■□□□□ 0.34
NEDD1-213ENST00000557644 SPATA32Q96LK8 384 aa17.18■□□□□ 0.34
NEDD1-213ENST00000557644 GABBR1Q9UBS5 961 aa17.18■□□□□ 0.34
NEDD1-213ENST00000557644 LRWD1Q9UFC0 647 aa17.18■□□□□ 0.34
NEDD1-213ENST00000557644 SRPRBQ9Y5M8 271 aaKnown RBP17.18■□□□□ 0.34
NEDD1-213ENST00000557644 ZEB2O60315 1214 aa17.18■□□□□ 0.34
NEDD1-213ENST00000557644 PSAPP07602 524 aa17.18■□□□□ 0.34
NEDD1-213ENST00000557644 MARK3P27448 753 aa17.18■□□□□ 0.34
NEDD1-213ENST00000557644 SOX10P56693 466 aa17.18■□□□□ 0.34
NEDD1-213ENST00000557644 PSMC6P62333 389 aa17.18■□□□□ 0.34
NEDD1-213ENST00000557644 GLG1Q92896 1179 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms