RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 SYN1P17600 705 aa9.49□□□□□ -0.89
PSEN1-223ENST00000557511 DNAJB2P25686 324 aa9.49□□□□□ -0.89
PSEN1-223ENST00000557511 ICAM3P32942 547 aa9.49□□□□□ -0.89
PSEN1-223ENST00000557511 MCM2P49736 904 aa9.49□□□□□ -0.89
PSEN1-223ENST00000557511 TLE2Q04725 743 aa9.49□□□□□ -0.89
PSEN1-223ENST00000557511 MTMR1Q13613 665 aa9.49□□□□□ -0.89
PSEN1-223ENST00000557511 ITGA7Q13683 1181 aa9.49□□□□□ -0.89
PSEN1-223ENST00000557511 PKN1Q16512 942 aa9.49□□□□□ -0.89
PSEN1-223ENST00000557511 CCSAPQ6IQ19 270 aaPredicted RBP9.49□□□□□ -0.89
PSEN1-223ENST00000557511 FAM184AQ8NB25 1140 aa9.49□□□□□ -0.89
PSEN1-223ENST00000557511 IL31RAQ8NI17 732 aa9.49□□□□□ -0.89
PSEN1-223ENST00000557511 PPTC7Q8NI37 304 aa9.49□□□□□ -0.89
PSEN1-223ENST00000557511 AFG1LQ8WV93 481 aa9.49□□□□□ -0.89
PSEN1-223ENST00000557511 GTF3C6Q969F1 213 aa9.49□□□□□ -0.89
PSEN1-223ENST00000557511 TOX2Q96NM4 488 aa9.49□□□□□ -0.89
PSEN1-223ENST00000557511 INPP4AQ96PE3 977 aaPredicted RBP9.49□□□□□ -0.89
PSEN1-223ENST00000557511 SENP7Q9BQF6 1050 aa9.49□□□□□ -0.89
PSEN1-223ENST00000557511 SDF4Q9BRK5 362 aa9.49□□□□□ -0.89
PSEN1-223ENST00000557511 SH2B1Q9NRF2 756 aaPredicted RBP9.49□□□□□ -0.89
PSEN1-223ENST00000557511 TMEM39AQ9NV64 488 aa9.49□□□□□ -0.89
PSEN1-223ENST00000557511 KIF3AQ9Y496 699 aa9.49□□□□□ -0.89
PSEN1-223ENST00000557511 STK36Q9NRP7 1315 aa9.49□□□□□ -0.89
PSEN1-223ENST00000557511 SPATA31C2B4DYI2 1134 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 SORBS3O60504 671 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 PPFIA4O75335 1185 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 MMP3P08254 477 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 RAG1P15918 1043 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 UBA1P22314 1058 aaKnown RBP9.48□□□□□ -0.89
PSEN1-223ENST00000557511 SREBF1P36956 1147 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 MRPS9P82933 396 aaKnown RBP9.48□□□□□ -0.89
PSEN1-223ENST00000557511 ARHGAP4P98171 946 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 PURAQ00577 322 aaKnown RBP9.48□□□□□ -0.89
PSEN1-223ENST00000557511 ARHGAP1Q07960 439 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 SNX17Q15036 470 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 SAFBQ15424 915 aaKnown RBP eCLIP9.48□□□□□ -0.89
PSEN1-223ENST00000557511 ME3Q16798 604 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 CELF3Q5SZQ8 465 aaKnown RBP9.48□□□□□ -0.89
PSEN1-223ENST00000557511 METTL7BQ6UX53 244 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 BLIDQ8IZY5 108 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 C7orf31Q8N865 590 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 NECAB1Q8N987 351 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 KRI1Q8N9T8 703 aaKnown RBP9.48□□□□□ -0.89
PSEN1-223ENST00000557511 TNPO1Q92973 898 aaKnown RBP9.48□□□□□ -0.89
PSEN1-223ENST00000557511 EMID1Q96A84 441 aaPredicted RBP9.48□□□□□ -0.89
PSEN1-223ENST00000557511 PGBD1Q96JS3 809 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 MXRA8Q9BRK3 442 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 ALG1Q9BT22 464 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 JADE2Q9NQC1 790 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 TMEM260Q9NX78 707 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 TSR3Q9UJK0 312 aaKnown RBP9.48□□□□□ -0.89
PSEN1-223ENST00000557511 ZNF215Q9UL58 517 aaPredicted RBP9.48□□□□□ -0.89
PSEN1-223ENST00000557511 PCDHA4Q9UN74 947 aa9.48□□□□□ -0.89
PSEN1-223ENST00000557511 BAZ2BQ9UIF8 2168 aaKnown RBP9.48□□□□□ -0.89
PSEN1-223ENST00000557511 CCDC194A0A1B0GVG4 234 aa9.47□□□□□ -0.89
PSEN1-223ENST00000557511 RCCD1A6NED2 376 aa9.47□□□□□ -0.89
PSEN1-223ENST00000557511 CTAGE5O15320 804 aa9.47□□□□□ -0.89
PSEN1-223ENST00000557511 MARCH6O60337 910 aa9.47□□□□□ -0.89
PSEN1-223ENST00000557511 RGS20O76081 388 aa9.47□□□□□ -0.89
PSEN1-223ENST00000557511 CLK2P49760 499 aaKnown RBP9.47□□□□□ -0.89
PSEN1-223ENST00000557511 HMGN5P82970 282 aaKnown RBP9.47□□□□□ -0.89
PSEN1-223ENST00000557511 SETQ01105 290 aaPredicted RBP9.47□□□□□ -0.89
PSEN1-223ENST00000557511 SP4Q02446 784 aa9.47□□□□□ -0.89
PSEN1-223ENST00000557511 PTPN11Q06124 597 aaPredicted RBP9.47□□□□□ -0.89
PSEN1-223ENST00000557511 GNL2Q13823 731 aaKnown RBP9.47□□□□□ -0.89
PSEN1-223ENST00000557511 CEP55Q53EZ4 464 aa9.47□□□□□ -0.89
PSEN1-223ENST00000557511 TMEM63BQ5T3F8 832 aa9.47□□□□□ -0.89
PSEN1-223ENST00000557511 SWT1Q5T5J6 900 aaKnown RBP9.47□□□□□ -0.89
PSEN1-223ENST00000557511 MYSM1Q5VVJ2 828 aa9.47□□□□□ -0.89
PSEN1-223ENST00000557511 CYFIP1Q7L576 1253 aa9.47□□□□□ -0.89
PSEN1-223ENST00000557511 ANKRD33Q7Z3H0 272 aa9.47□□□□□ -0.89
PSEN1-223ENST00000557511 KRT25Q7Z3Z0 450 aa9.47□□□□□ -0.89
PSEN1-223ENST00000557511 CCDC83Q8IWF9 413 aa9.47□□□□□ -0.89
PSEN1-223ENST00000557511 CCDC155Q8N6L0 562 aa9.47□□□□□ -0.89
PSEN1-223ENST00000557511 NAP1L4Q99733 375 aaKnown RBP9.47□□□□□ -0.89
PSEN1-223ENST00000557511 PKD2L1Q9P0L9 805 aa9.47□□□□□ -0.89
PSEN1-223ENST00000557511 UBIAD1Q9Y5Z9 338 aa9.47□□□□□ -0.89
PSEN1-223ENST00000557511 SMCHD1A6NHR9 2005 aa9.46□□□□□ -0.89
PSEN1-223ENST00000557511 GNAT1P11488 350 aa9.46□□□□□ -0.9
PSEN1-223ENST00000557511 PTGS1P23219 599 aa9.46□□□□□ -0.9
PSEN1-223ENST00000557511 PSMC6P62333 389 aa9.46□□□□□ -0.9
PSEN1-223ENST00000557511 NONOQ15233 471 aaKnown RBP eCLIP9.46□□□□□ -0.9
PSEN1-223ENST00000557511 NBPF20Q3BBV1 942 aa9.46□□□□□ -0.9
PSEN1-223ENST00000557511 UTP14CQ5TAP6 766 aaKnown RBP9.46□□□□□ -0.9
PSEN1-223ENST00000557511 NFRKBQ6P4R8 1299 aa9.46□□□□□ -0.9
PSEN1-223ENST00000557511 NIPA1Q7RTP0 329 aa9.46□□□□□ -0.9
PSEN1-223ENST00000557511 PLA2G4DQ86XP0 818 aa9.46□□□□□ -0.9
PSEN1-223ENST00000557511 TMEM199Q8N511 208 aa9.46□□□□□ -0.9
PSEN1-223ENST00000557511 RETREG2Q8NC44 543 aa9.46□□□□□ -0.9
PSEN1-223ENST00000557511 SEPT1Q8WYJ6 367 aa9.46□□□□□ -0.9
PSEN1-223ENST00000557511 LLPHQ9BRT6 129 aaKnown RBP9.46□□□□□ -0.9
PSEN1-223ENST00000557511 UBE2OQ9C0C9 1292 aaKnown RBP9.46□□□□□ -0.9
PSEN1-223ENST00000557511 AZI2Q9H6S1 392 aa9.46□□□□□ -0.9
PSEN1-223ENST00000557511 JPH1Q9HDC5 661 aaPredicted RBP9.46□□□□□ -0.9
PSEN1-223ENST00000557511 PDLIM7Q9NR12 457 aa9.46□□□□□ -0.9
PSEN1-223ENST00000557511 FRMPD3Q5JV73 1810 aa9.46□□□□□ -0.9
PSEN1-223ENST00000557511 MCM3APO60318 1980 aa9.46□□□□□ -0.9
PSEN1-223ENST00000557511 CENPFP49454 3210 aa9.46□□□□□ -0.9
PSEN1-223ENST00000557511 LRRC37A2A6NM11 1700 aa9.45□□□□□ -0.9
PSEN1-223ENST00000557511 CYP3A4P08684 503 aa9.45□□□□□ -0.9
PSEN1-223ENST00000557511 ITGB5P18084 799 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms