RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 TRIM50Q86XT4 487 aa12□□□□□ -0.49
HNRNPC-232ENST00000557442 HSCBQ8IWL3 235 aa12□□□□□ -0.49
HNRNPC-232ENST00000557442 FAM126BQ8IXS8 530 aa12□□□□□ -0.49
HNRNPC-232ENST00000557442 KAT2BQ92831 832 aa12□□□□□ -0.49
HNRNPC-232ENST00000557442 SEZ6LQ9BYH1 1024 aa12□□□□□ -0.49
HNRNPC-232ENST00000557442 PDLIM7Q9NR12 457 aa12□□□□□ -0.49
HNRNPC-232ENST00000557442 DDX25Q9UHL0 483 aaKnown RBP12□□□□□ -0.49
HNRNPC-232ENST00000557442 RANBP2P49792 3224 aaKnown RBP12□□□□□ -0.49
HNRNPC-232ENST00000557442 TRIOBPQ9H2D6 2365 aa12□□□□□ -0.49
HNRNPC-232ENST00000557442 CYP3A7-CYP3A51PA0A087WV96 503 aa11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 H3BRB1 525 aa11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 MSH4O15457 936 aa11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 SLC37A4O43826 429 aa11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 CCNT1O60563 726 aaKnown RBP11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 GCFC2P16383 781 aaKnown RBP11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 CYP3A7P24462 503 aa11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 ACTR2P61160 394 aa11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 CUL4AQ13619 759 aa11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 Q4G0T1 1027 aa11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 PRPF38BQ5VTL8 546 aaKnown RBP11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 NFRKBQ6P4R8 1299 aa11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 SLC43A3Q8NBI5 491 aa11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 SEPT1Q8WYJ6 367 aa11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 TOX2Q96NM4 488 aa11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 NAP1L4Q99733 375 aaKnown RBP11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 C16orf70Q9BSU1 422 aa11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 TUT1Q9H6E5 874 aaKnown RBP11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 TBC1D22BQ9NU19 505 aa11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 PCDH10Q9P2E7 1040 aa11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 ZNF215Q9UL58 517 aaPredicted RBP11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 GBF1Q92538 1859 aa11.99□□□□□ -0.49
HNRNPC-232ENST00000557442 EMSYQ7Z589 1322 aa11.98□□□□□ -0.49
HNRNPC-232ENST00000557442 GSTTP1A0A1W2PQM5 241 aa11.98□□□□□ -0.49
HNRNPC-232ENST00000557442 H3BQV1 296 aa11.98□□□□□ -0.49
HNRNPC-232ENST00000557442 B4GALT4O60513 344 aa11.98□□□□□ -0.49
HNRNPC-232ENST00000557442 GAS7O60861 476 aa11.98□□□□□ -0.49
HNRNPC-232ENST00000557442 CCNE2O96020 404 aa11.98□□□□□ -0.49
HNRNPC-232ENST00000557442 FAAP100Q0VG06 881 aa11.98□□□□□ -0.49
HNRNPC-232ENST00000557442 LRCH2Q5VUJ6 765 aa11.98□□□□□ -0.49
HNRNPC-232ENST00000557442 SH3RF1Q7Z6J0 888 aa11.98□□□□□ -0.49
HNRNPC-232ENST00000557442 C7orf31Q8N865 590 aa11.98□□□□□ -0.49
HNRNPC-232ENST00000557442 TET1Q8NFU7 2136 aa11.98□□□□□ -0.49
HNRNPC-232ENST00000557442 GLG1Q92896 1179 aa11.98□□□□□ -0.49
HNRNPC-232ENST00000557442 SLC5A5Q92911 643 aa11.98□□□□□ -0.49
HNRNPC-232ENST00000557442 SNX21Q969T3 373 aa11.98□□□□□ -0.49
HNRNPC-232ENST00000557442 MBOAT7Q96N66 472 aa11.98□□□□□ -0.49
HNRNPC-232ENST00000557442 TRPV6Q9H1D0 765 aa11.98□□□□□ -0.49
HNRNPC-232ENST00000557442 FOXP1Q9H334 677 aaPredicted RBP11.98□□□□□ -0.49
HNRNPC-232ENST00000557442 TRMT13Q9NUP7 481 aaKnown RBP11.98□□□□□ -0.49
HNRNPC-232ENST00000557442 TMEM39AQ9NV64 488 aa11.98□□□□□ -0.49
HNRNPC-232ENST00000557442 KIF28PB7ZC32 967 aa11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 HAS3O00219 553 aa11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 DHX15O43143 795 aaKnown RBP11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 CHMP2AO43633 222 aa11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 CD4P01730 458 aa11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 MARK3P27448 753 aa11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 KRT76Q01546 638 aa11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 PTPN11Q06124 597 aaPredicted RBP11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 MCTP1Q6DN14 999 aa11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 PPP4R3AQ6IN85 833 aa11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 ZNF746Q6NUN9 644 aaPredicted RBP11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 NOSTRINQ8IVI9 506 aa11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 ETNPPLQ8TBG4 499 aa11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 GJA10Q969M2 543 aa11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 RIT2Q99578 217 aa11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 TEKT3Q9BXF9 490 aa11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 AZI2Q9H6S1 392 aa11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 FOXD4L1Q9NU39 408 aa11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 HDAC6Q9UBN7 1215 aa11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 GTF2IRD1Q9UHL9 959 aa11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 NOD1Q9Y239 953 aa11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 SAMM50Q9Y512 469 aa11.97□□□□□ -0.49
HNRNPC-232ENST00000557442 TRIM43BA6NCK2 446 aa11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 BACH1O14867 736 aa11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 KIAA0355O15063 1070 aa11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 MARCH6O60337 910 aa11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 LGR5O75473 907 aa11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 SUPT20HL2P0C7V6 817 aa11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 SMIM10L2AP0DMW4 78 aa11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 SMIM10L2BP0DMW5 78 aa11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 RAG1P15918 1043 aa11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 ATP2B1P20020 1258 aa11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 PTGISQ16647 500 aa11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 LARP1BQ659C4 914 aaKnown RBP11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 GDF6Q6KF10 455 aaPredicted RBP11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 MIS18BP1Q6P0N0 1132 aa11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 SESTD1Q86VW0 696 aa11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 SMAP1Q8IYB5 467 aaPredicted RBP11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 TRIM43Q96BQ3 446 aaPredicted RBP11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 INTS4Q96HW7 963 aaKnown RBP11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 LBHD1Q9BQE6 289 aaPredicted RBP11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 SMARCAD1Q9H4L7 1026 aa11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 ERAP1Q9NZ08 941 aa11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 TBX21Q9UL17 535 aa11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 MICAL3Q7RTP6 2002 aa11.96□□□□□ -0.49
HNRNPC-232ENST00000557442 LAMA2P24043 3122 aaKnown RBP11.96□□□□□ -0.5
HNRNPC-232ENST00000557442 TCHHQ07283 1943 aa11.96□□□□□ -0.5
HNRNPC-232ENST00000557442 WDR64B1ANS9 1081 aa11.95□□□□□ -0.5
HNRNPC-232ENST00000557442 WNT7AO00755 349 aa11.95□□□□□ -0.5
HNRNPC-232ENST00000557442 NEMFO60524 1076 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms