RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 GJD3Q8N144 294 aa16.26■□□□□ 0.19
SLIRP-210ENST00000557431 NCOA7Q8NI08 942 aa16.26■□□□□ 0.19
SLIRP-210ENST00000557431 SMARCC2Q8TAQ2 1214 aa16.26■□□□□ 0.19
SLIRP-210ENST00000557431 USP26Q9BXU7 913 aa16.26■□□□□ 0.19
SLIRP-210ENST00000557431 MUC6Q6W4X9 2439 aa16.26■□□□□ 0.19
SLIRP-210ENST00000557431 PI4K2BG5E9Z4 385 aa16.25■□□□□ 0.19
SLIRP-210ENST00000557431 H3BNC9 293 aa16.25■□□□□ 0.19
SLIRP-210ENST00000557431 ATP9AO75110 1047 aa16.25■□□□□ 0.19
SLIRP-210ENST00000557431 CHRNA1P02708 482 aa16.25■□□□□ 0.19
SLIRP-210ENST00000557431 ADAM17P78536 824 aa16.25■□□□□ 0.19
SLIRP-210ENST00000557431 NEDD9Q14511 834 aa16.25■□□□□ 0.19
SLIRP-210ENST00000557431 CLUL1Q15846 466 aa16.25■□□□□ 0.19
SLIRP-210ENST00000557431 MB21D2Q8IYB1 491 aaPredicted RBP16.25■□□□□ 0.19
SLIRP-210ENST00000557431 SAMD3Q8N6K7 520 aa16.25■□□□□ 0.19
SLIRP-210ENST00000557431 BANK1Q8NDB2 785 aa16.25■□□□□ 0.19
SLIRP-210ENST00000557431 IGDCC4Q8TDY8 1250 aa16.25■□□□□ 0.19
SLIRP-210ENST00000557431 U3KPZ7 1027 aaPredicted RBP16.25■□□□□ 0.19
SLIRP-210ENST00000557431 GRXCR2A6NFK2 248 aa16.24■□□□□ 0.19
SLIRP-210ENST00000557431 MEIS2O14770 477 aa16.24■□□□□ 0.19
SLIRP-210ENST00000557431 GPR37L1O60883 481 aa16.24■□□□□ 0.19
SLIRP-210ENST00000557431 CTNNB1P35222 781 aa16.24■□□□□ 0.19
SLIRP-210ENST00000557431 TCF7P36402 384 aaPredicted RBP16.24■□□□□ 0.19
SLIRP-210ENST00000557431 AAMPQ13685 434 aa16.24■□□□□ 0.19
SLIRP-210ENST00000557431 UBE2SQ16763 222 aa16.24■□□□□ 0.19
SLIRP-210ENST00000557431 CATIPQ7Z7H3 387 aa16.24■□□□□ 0.19
SLIRP-210ENST00000557431 ZNF654Q8IZM8 581 aa16.24■□□□□ 0.19
SLIRP-210ENST00000557431 LY9Q9HBG7 655 aa16.24■□□□□ 0.19
SLIRP-210ENST00000557431 CLDND1Q9NY35 253 aa16.24■□□□□ 0.19
SLIRP-210ENST00000557431 C5orf42Q9H799 3197 aa16.24■□□□□ 0.19
SLIRP-210ENST00000557431 GRM6O15303 877 aa16.23■□□□□ 0.19
SLIRP-210ENST00000557431 HOXD11P31277 338 aaPredicted RBP16.23■□□□□ 0.19
SLIRP-210ENST00000557431 GTF2F1P35269 517 aaKnown RBP eCLIP16.23■□□□□ 0.19
SLIRP-210ENST00000557431 IGBP1P78318 339 aa16.23■□□□□ 0.19
SLIRP-210ENST00000557431 IRX6P78412 446 aaPredicted RBP16.23■□□□□ 0.19
SLIRP-210ENST00000557431 PTPROQ16827 1216 aa16.23■□□□□ 0.19
SLIRP-210ENST00000557431 TIGD5Q53EQ6 642 aa16.23■□□□□ 0.19
SLIRP-210ENST00000557431 PCNX4Q63HM2 1172 aa16.23■□□□□ 0.19
SLIRP-210ENST00000557431 RPAINQ86UA6 219 aa16.23■□□□□ 0.19
SLIRP-210ENST00000557431 NEK9Q8TD19 979 aa16.23■□□□□ 0.19
SLIRP-210ENST00000557431 UIMC1Q96RL1 719 aa16.23■□□□□ 0.19
SLIRP-210ENST00000557431 ZNF215Q9UL58 517 aaPredicted RBP16.23■□□□□ 0.19
SLIRP-210ENST00000557431 GSTTP1A0A1W2PQM5 241 aa16.22■□□□□ 0.19
SLIRP-210ENST00000557431 LINC00271P0C7V0 271 aa16.22■□□□□ 0.19
SLIRP-210ENST00000557431 KCNA2P16389 499 aa16.22■□□□□ 0.19
SLIRP-210ENST00000557431 DLX2Q07687 328 aaPredicted RBP16.22■□□□□ 0.19
SLIRP-210ENST00000557431 MGAT3Q09327 533 aa16.22■□□□□ 0.19
SLIRP-210ENST00000557431 PPFIA1Q13136 1202 aa16.22■□□□□ 0.19
SLIRP-210ENST00000557431 LPIN1Q14693 890 aa16.22■□□□□ 0.19
SLIRP-210ENST00000557431 SART3Q15020 963 aaKnown RBP16.22■□□□□ 0.19
SLIRP-210ENST00000557431 FAM26DQ5JW98 314 aa16.22■□□□□ 0.19
SLIRP-210ENST00000557431 FIBCD1Q8N539 461 aa16.22■□□□□ 0.19
SLIRP-210ENST00000557431 SRBD1Q8N5C6 995 aaKnown RBP16.22■□□□□ 0.19
SLIRP-210ENST00000557431 DNAJB3Q8WWF6 145 aa16.22■□□□□ 0.19
SLIRP-210ENST00000557431 CUL5Q93034 780 aa16.22■□□□□ 0.19
SLIRP-210ENST00000557431 RRP36Q96EU6 259 aaKnown RBP16.22■□□□□ 0.19
SLIRP-210ENST00000557431 SAMD11Q96NU1 681 aa16.22■□□□□ 0.19
SLIRP-210ENST00000557431 LRRC2Q9BYS8 371 aa16.22■□□□□ 0.19
SLIRP-210ENST00000557431 NSUN3Q9H649 340 aaKnown RBP16.22■□□□□ 0.19
SLIRP-210ENST00000557431 RBM8AQ9Y5S9 174 aaKnown RBP16.22■□□□□ 0.19
SLIRP-210ENST00000557431 ZNF318Q5VUA4 2279 aa16.22■□□□□ 0.19
SLIRP-210ENST00000557431 SGSM2O43147 1006 aa16.21■□□□□ 0.19
SLIRP-210ENST00000557431 CAND2O75155 1236 aa16.21■□□□□ 0.19
SLIRP-210ENST00000557431 STAM2O75886 525 aa16.21■□□□□ 0.19
SLIRP-210ENST00000557431 GNAT1P11488 350 aa16.21■□□□□ 0.19
SLIRP-210ENST00000557431 IBSPP21815 317 aaPredicted RBP16.21■□□□□ 0.19
SLIRP-210ENST00000557431 TMEM62Q0P6H9 643 aa16.21■□□□□ 0.19
SLIRP-210ENST00000557431 TRAF1Q13077 416 aa16.21■□□□□ 0.19
SLIRP-210ENST00000557431 GRIK4Q16099 956 aa16.21■□□□□ 0.19
SLIRP-210ENST00000557431 NLRX1Q86UT6 975 aa16.21■□□□□ 0.19
SLIRP-210ENST00000557431 CCDC82Q8N4S0 544 aa16.21■□□□□ 0.19
SLIRP-210ENST00000557431 CTCFLQ8NI51 663 aaPredicted RBP16.21■□□□□ 0.19
SLIRP-210ENST00000557431 RUFY2Q8WXA3 655 aa16.21■□□□□ 0.19
SLIRP-210ENST00000557431 LINC01599Q8WXQ3 324 aa16.21■□□□□ 0.19
SLIRP-210ENST00000557431 PABPC5Q96DU9 382 aaKnown RBP16.21■□□□□ 0.19
SLIRP-210ENST00000557431 PGBD1Q96JS3 809 aa16.21■□□□□ 0.19
SLIRP-210ENST00000557431 SPZ1Q9BXG8 430 aa16.21■□□□□ 0.19
SLIRP-210ENST00000557431 FAM49AQ9H0Q0 323 aaPredicted RBP16.21■□□□□ 0.19
SLIRP-210ENST00000557431 CDY2AQ9Y6F7 541 aa16.21■□□□□ 0.19
SLIRP-210ENST00000557431 TECTAO75443 2155 aa16.21■□□□□ 0.19
SLIRP-210ENST00000557431 ADGRA3Q8IWK6 1321 aa16.2■□□□□ 0.18
SLIRP-210ENST00000557431 LINC01565O15544 149 aa16.2■□□□□ 0.18
SLIRP-210ENST00000557431 PRC1O43663 620 aa16.2■□□□□ 0.18
SLIRP-210ENST00000557431 ITGB5P18084 799 aa16.2■□□□□ 0.18
SLIRP-210ENST00000557431 LTBRP36941 435 aa16.2■□□□□ 0.18
SLIRP-210ENST00000557431 TRAPPC12Q8WVT3 735 aa16.2■□□□□ 0.18
SLIRP-210ENST00000557431 APBB2Q92870 758 aa16.2■□□□□ 0.18
SLIRP-210ENST00000557431 IL17RAQ96F46 866 aa16.2■□□□□ 0.18
SLIRP-210ENST00000557431 IGFLR1Q9H665 355 aa16.2■□□□□ 0.18
SLIRP-210ENST00000557431 EHMT1Q9H9B1 1298 aa16.2■□□□□ 0.18
SLIRP-210ENST00000557431 AGO3Q9H9G7 860 aaKnown RBP16.2■□□□□ 0.18
SLIRP-210ENST00000557431 ALG13Q9NP73 1137 aaKnown RBP16.2■□□□□ 0.18
SLIRP-210ENST00000557431 SEC63Q9UGP8 760 aaKnown RBP16.2■□□□□ 0.18
SLIRP-210ENST00000557431 TUBE1Q9UJT0 475 aa16.2■□□□□ 0.18
SLIRP-210ENST00000557431 NRCAMQ92823 1304 aa16.19■□□□□ 0.18
SLIRP-210ENST00000557431 SH2B2O14492 632 aaPredicted RBP16.19■□□□□ 0.18
SLIRP-210ENST00000557431 ENPP3O14638 875 aa16.19■□□□□ 0.18
SLIRP-210ENST00000557431 DDAH1O94760 285 aa16.19■□□□□ 0.18
SLIRP-210ENST00000557431 CD52P31358 61 aa16.19■□□□□ 0.18
SLIRP-210ENST00000557431 GATMP50440 423 aa16.19■□□□□ 0.18
SLIRP-210ENST00000557431 HYAL1Q12794 435 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms