RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 TM6SF1Q9BZW5 370 aa25.92■■□□□ 1.74
TMEM260-214ENST00000556975 ESYT2A0FGR8 921 aa25.91■■□□□ 1.74
TMEM260-214ENST00000556975 TREHO43280 583 aa25.91■■□□□ 1.74
TMEM260-214ENST00000556975 TCF7P36402 384 aaPredicted RBP25.91■■□□□ 1.74
TMEM260-214ENST00000556975 SREBF1P36956 1147 aa25.91■■□□□ 1.74
TMEM260-214ENST00000556975 ADAM17P78536 824 aa25.91■■□□□ 1.74
TMEM260-214ENST00000556975 SP4Q02446 784 aa25.91■■□□□ 1.74
TMEM260-214ENST00000556975 NTRK3Q16288 839 aa25.91■■□□□ 1.74
TMEM260-214ENST00000556975 PKN1Q16512 942 aa25.91■■□□□ 1.74
TMEM260-214ENST00000556975 CNKSR3Q6P9H4 555 aa25.91■■□□□ 1.74
TMEM260-214ENST00000556975 ZMYND12Q9H0C1 365 aa25.91■■□□□ 1.74
TMEM260-214ENST00000556975 KCNH7Q9NS40 1196 aa25.91■■□□□ 1.74
TMEM260-214ENST00000556975 PDIA3P30101 505 aaKnown RBP25.9■■□□□ 1.74
TMEM260-214ENST00000556975 CEP55Q53EZ4 464 aa25.9■■□□□ 1.74
TMEM260-214ENST00000556975 CYP2W1Q8TAV3 490 aa25.9■■□□□ 1.74
TMEM260-214ENST00000556975 PGBD1Q96JS3 809 aa25.9■■□□□ 1.74
TMEM260-214ENST00000556975 SETD4Q9NVD3 440 aa25.9■■□□□ 1.74
TMEM260-214ENST00000556975 TMEM260Q9NX78 707 aa25.9■■□□□ 1.74
TMEM260-214ENST00000556975 NFASCO94856 1347 aa25.89■■□□□ 1.74
TMEM260-214ENST00000556975 NRCAMQ92823 1304 aa25.89■■□□□ 1.74
TMEM260-214ENST00000556975 MEIS1O00470 390 aa25.89■■□□□ 1.74
TMEM260-214ENST00000556975 CAND2O75155 1236 aa25.89■■□□□ 1.74
TMEM260-214ENST00000556975 IFNAR1P17181 557 aa25.89■■□□□ 1.74
TMEM260-214ENST00000556975 THPOP40225 353 aa25.89■■□□□ 1.74
TMEM260-214ENST00000556975 MBTPS1Q14703 1052 aa25.89■■□□□ 1.74
TMEM260-214ENST00000556975 MCTP2Q6DN12 878 aa25.89■■□□□ 1.74
TMEM260-214ENST00000556975 CCDC12Q8WUD4 166 aaPredicted RBP25.89■■□□□ 1.74
TMEM260-214ENST00000556975 RNF26Q9BY78 433 aaPredicted RBP25.89■■□□□ 1.74
TMEM260-214ENST00000556975 EMSYQ7Z589 1322 aa25.88■■□□□ 1.73
TMEM260-214ENST00000556975 ABHD14A-ACY1A0A1B0GW23 586 aa25.88■■□□□ 1.73
TMEM260-214ENST00000556975 RSPH10B2B2RC85 870 aa25.88■■□□□ 1.73
TMEM260-214ENST00000556975 RSPH10BP0C881 870 aa25.88■■□□□ 1.73
TMEM260-214ENST00000556975 MYOGP15173 224 aa25.88■■□□□ 1.73
TMEM260-214ENST00000556975 TOB2Q14106 344 aaPredicted RBP25.88■■□□□ 1.73
TMEM260-214ENST00000556975 NIPA1Q7RTP0 329 aa25.88■■□□□ 1.73
TMEM260-214ENST00000556975 HERC6Q8IVU3 1022 aa25.88■■□□□ 1.73
TMEM260-214ENST00000556975 CRYGNQ8WXF5 182 aa25.88■■□□□ 1.73
TMEM260-214ENST00000556975 PRDM12Q9H4Q4 367 aa25.88■■□□□ 1.73
TMEM260-214ENST00000556975 JPH1Q9HDC5 661 aaPredicted RBP25.88■■□□□ 1.73
TMEM260-214ENST00000556975 ERAP1Q9NZ08 941 aa25.88■■□□□ 1.73
TMEM260-214ENST00000556975 CYP46A1Q9Y6A2 500 aa25.88■■□□□ 1.73
TMEM260-214ENST00000556975 KAT6AQ92794 2004 aa25.87■■□□□ 1.73
TMEM260-214ENST00000556975 EFCAB14O75071 495 aa25.87■■□□□ 1.73
TMEM260-214ENST00000556975 ARP10275 920 aa25.87■■□□□ 1.73
TMEM260-214ENST00000556975 KCNJ6P48051 423 aa25.87■■□□□ 1.73
TMEM260-214ENST00000556975 WDR5P61964 334 aaKnown RBP25.87■■□□□ 1.73
TMEM260-214ENST00000556975 LMBR1Q8WVP7 490 aa25.87■■□□□ 1.73
TMEM260-214ENST00000556975 PHKBQ93100 1093 aa25.87■■□□□ 1.73
TMEM260-214ENST00000556975 GAS2L1Q99501 681 aaPredicted RBP25.87■■□□□ 1.73
TMEM260-214ENST00000556975 SMARCAD1Q9H4L7 1026 aa25.87■■□□□ 1.73
TMEM260-214ENST00000556975 C6orf50Q9HD87 102 aa25.87■■□□□ 1.73
TMEM260-214ENST00000556975 PKD2L1Q9P0L9 805 aa25.87■■□□□ 1.73
TMEM260-214ENST00000556975 SLC9A2Q9UBY0 812 aa25.87■■□□□ 1.73
TMEM260-214ENST00000556975 LGR5O75473 907 aa25.86■■□□□ 1.73
TMEM260-214ENST00000556975 CYP3A4P08684 503 aa25.86■■□□□ 1.73
TMEM260-214ENST00000556975 GNA11P29992 359 aa25.86■■□□□ 1.73
TMEM260-214ENST00000556975 ARHGAP4P98171 946 aa25.86■■□□□ 1.73
TMEM260-214ENST00000556975 AKAP17AQ02040 695 aaKnown RBP25.86■■□□□ 1.73
TMEM260-214ENST00000556975 TCTN1Q2MV58 587 aa25.86■■□□□ 1.73
TMEM260-214ENST00000556975 JAKMIP3Q5VZ66 844 aa25.86■■□□□ 1.73
TMEM260-214ENST00000556975 PPP2R2DQ66LE6 453 aa25.86■■□□□ 1.73
TMEM260-214ENST00000556975 ZNF274Q96GC6 653 aaPredicted RBP25.86■■□□□ 1.73
TMEM260-214ENST00000556975 AGO4Q9HCK5 861 aaKnown RBP25.86■■□□□ 1.73
TMEM260-214ENST00000556975 KIF28PB7ZC32 967 aa25.85■■□□□ 1.73
TMEM260-214ENST00000556975 IKBKEQ14164 716 aa25.85■■□□□ 1.73
TMEM260-214ENST00000556975 RPAINQ86UA6 219 aa25.85■■□□□ 1.73
TMEM260-214ENST00000556975 SDF4Q9BRK5 362 aa25.85■■□□□ 1.73
TMEM260-214ENST00000556975 CHD7Q9P2D1 2997 aa25.85■■□□□ 1.73
TMEM260-214ENST00000556975 CA3P07451 260 aa25.84■■□□□ 1.73
TMEM260-214ENST00000556975 CCT2P78371 535 aaKnown RBP25.84■■□□□ 1.73
TMEM260-214ENST00000556975 ITGB3BPQ13352 177 aaPredicted RBP25.84■■□□□ 1.73
TMEM260-214ENST00000556975 FAM26DQ5JW98 314 aa25.84■■□□□ 1.73
TMEM260-214ENST00000556975 GLG1Q92896 1179 aa25.84■■□□□ 1.73
TMEM260-214ENST00000556975 PCYT2Q99447 389 aa25.84■■□□□ 1.73
TMEM260-214ENST00000556975 PTPRSQ13332 1948 aa25.83■■□□□ 1.73
TMEM260-214ENST00000556975 ADAMTS3O15072 1205 aa25.83■■□□□ 1.73
TMEM260-214ENST00000556975 ATG7O95352 703 aa25.83■■□□□ 1.73
TMEM260-214ENST00000556975 ZNF76P36508 570 aa25.83■■□□□ 1.73
TMEM260-214ENST00000556975 ADGRE1Q14246 886 aa25.83■■□□□ 1.73
TMEM260-214ENST00000556975 PLEKHG4Q58EX7 1191 aa25.83■■□□□ 1.73
TMEM260-214ENST00000556975 REXO1Q8N1G1 1221 aaKnown RBP25.83■■□□□ 1.73
TMEM260-214ENST00000556975 DBF4BQ8NFT6 615 aa25.83■■□□□ 1.73
TMEM260-214ENST00000556975 SLC26A6Q9BXS9 759 aa25.83■■□□□ 1.73
TMEM260-214ENST00000556975 NCOA5Q9HCD5 579 aaKnown RBP25.83■■□□□ 1.73
TMEM260-214ENST00000556975 IGLV3-22A0A075B6J6 115 aa25.82■■□□□ 1.72
TMEM260-214ENST00000556975 MBLAC1A4D2B0 266 aaPredicted RBP25.82■■□□□ 1.72
TMEM260-214ENST00000556975 FAM86B1E9PN63 330 aa25.82■■□□□ 1.72
TMEM260-214ENST00000556975 FAM86B2P0C5J1 330 aa25.82■■□□□ 1.72
TMEM260-214ENST00000556975 ACTR2P61160 394 aa25.82■■□□□ 1.72
TMEM260-214ENST00000556975 DEFB103AP81534 67 aa25.82■■□□□ 1.72
TMEM260-214ENST00000556975 PPFIA1Q13136 1202 aa25.82■■□□□ 1.72
TMEM260-214ENST00000556975 MKRN4PQ13434 485 aaPredicted RBP25.82■■□□□ 1.72
TMEM260-214ENST00000556975 TAF2Q6P1X5 1199 aa25.82■■□□□ 1.72
TMEM260-214ENST00000556975 PLPPR4Q7Z2D5 763 aa25.82■■□□□ 1.72
TMEM260-214ENST00000556975 CCDC148Q8NFR7 591 aa25.82■■□□□ 1.72
TMEM260-214ENST00000556975 BICD2Q8TD16 824 aa25.82■■□□□ 1.72
TMEM260-214ENST00000556975 UPF3BQ9BZI7 483 aaKnown RBP25.82■■□□□ 1.72
TMEM260-214ENST00000556975 SH3GLB2Q9NR46 395 aa25.82■■□□□ 1.72
TMEM260-214ENST00000556975 GRIK4Q16099 956 aa25.81■■□□□ 1.72
TMEM260-214ENST00000556975 TNPO1Q92973 898 aaKnown RBP25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms