RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 HIC1Q14526 733 aa25.58■■□□□ 1.69
PABPN1-206ENST00000556809 NIPA1Q7RTP0 329 aa25.58■■□□□ 1.69
PABPN1-206ENST00000556809 C7orf31Q8N865 590 aa25.58■■□□□ 1.69
PABPN1-206ENST00000556809 VWCEQ96DN2 955 aa25.58■■□□□ 1.69
PABPN1-206ENST00000556809 TUT1Q9H6E5 874 aaKnown RBP25.58■■□□□ 1.69
PABPN1-206ENST00000556809 BRMS1Q9HCU9 246 aa25.58■■□□□ 1.69
PABPN1-206ENST00000556809 PKD2L1Q9P0L9 805 aa25.58■■□□□ 1.69
PABPN1-206ENST00000556809 KIF3AQ9Y496 699 aa25.58■■□□□ 1.69
PABPN1-206ENST00000556809 IGLV3-22A0A075B6J6 115 aa25.57■■□□□ 1.68
PABPN1-206ENST00000556809 GSTTP1A0A1W2PQM5 241 aa25.57■■□□□ 1.68
PABPN1-206ENST00000556809 EDIL3O43854 480 aa25.57■■□□□ 1.68
PABPN1-206ENST00000556809 HOXC8P31273 242 aa25.57■■□□□ 1.68
PABPN1-206ENST00000556809 KRT2P35908 639 aa25.57■■□□□ 1.68
PABPN1-206ENST00000556809 CCL23P55773 120 aa25.57■■□□□ 1.68
PABPN1-206ENST00000556809 OXER1Q8TDS5 423 aa25.57■■□□□ 1.68
PABPN1-206ENST00000556809 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.57■■□□□ 1.682e-30■■■□□ 18.1
PABPN1-206ENST00000556809 AGO4Q9HCK5 861 aaKnown RBP25.57■■□□□ 1.68
PABPN1-206ENST00000556809 SMC3Q9UQE7 1217 aa25.57■■□□□ 1.68
PABPN1-206ENST00000556809 TANC1Q9C0D5 1861 aa25.57■■□□□ 1.68
PABPN1-206ENST00000556809 NFASCO94856 1347 aa25.57■■□□□ 1.68
PABPN1-206ENST00000556809 PITPNM1O00562 1244 aa25.56■■□□□ 1.68
PABPN1-206ENST00000556809 GJB2P29033 226 aa25.56■■□□□ 1.68
PABPN1-206ENST00000556809 SP4Q02446 784 aa25.56■■□□□ 1.68
PABPN1-206ENST00000556809 ITGB3BPQ13352 177 aaPredicted RBP25.56■■□□□ 1.68
PABPN1-206ENST00000556809 TMEM240Q5SV17 173 aa25.56■■□□□ 1.68
PABPN1-206ENST00000556809 KRT25Q7Z3Z0 450 aa25.56■■□□□ 1.68
PABPN1-206ENST00000556809 HSCBQ8IWL3 235 aa25.56■■□□□ 1.68
PABPN1-206ENST00000556809 IL23AQ9NPF7 189 aa25.56■■□□□ 1.68
PABPN1-206ENST00000556809 SCN5AQ14524 2016 aa25.56■■□□□ 1.68
PABPN1-206ENST00000556809 TCF7P36402 384 aaPredicted RBP25.55■■□□□ 1.68
PABPN1-206ENST00000556809 ZNF76P36508 570 aa25.55■■□□□ 1.68
PABPN1-206ENST00000556809 GUCY1B3Q02153 619 aa25.55■■□□□ 1.68
PABPN1-206ENST00000556809 NONOQ15233 471 aaKnown RBP eCLIP25.55■■□□□ 1.68
PABPN1-206ENST00000556809 TRIM50Q86XT4 487 aa25.55■■□□□ 1.68
PABPN1-206ENST00000556809 DIS3L2Q8IYB7 885 aaKnown RBP25.55■■□□□ 1.68
PABPN1-206ENST00000556809 FBXO18Q8NFZ0 1043 aa25.55■■□□□ 1.68
PABPN1-206ENST00000556809 SEPT1Q8WYJ6 367 aa25.55■■□□□ 1.68
PABPN1-206ENST00000556809 DHX38Q92620 1227 aaKnown RBP25.55■■□□□ 1.68
PABPN1-206ENST00000556809 CCDC194A0A1B0GVG4 234 aa25.54■■□□□ 1.68
PABPN1-206ENST00000556809 ACRP10323 421 aa25.54■■□□□ 1.68
PABPN1-206ENST00000556809 CIITAP33076 1130 aa25.54■■□□□ 1.68
PABPN1-206ENST00000556809 ZNF200P98182 395 aaPredicted RBP25.54■■□□□ 1.68
PABPN1-206ENST00000556809 RBL2Q08999 1139 aa25.54■■□□□ 1.68
PABPN1-206ENST00000556809 RASIP1Q5U651 963 aa25.54■■□□□ 1.68
PABPN1-206ENST00000556809 GPR153Q6NV75 609 aa25.54■■□□□ 1.68
PABPN1-206ENST00000556809 TBCKQ8TEA7 893 aa25.54■■□□□ 1.68
PABPN1-206ENST00000556809 SCLYQ96I15 445 aa25.54■■□□□ 1.68
PABPN1-206ENST00000556809 JPH1Q9HDC5 661 aaPredicted RBP25.54■■□□□ 1.68
PABPN1-206ENST00000556809 NOD1Q9Y239 953 aa25.54■■□□□ 1.68
PABPN1-206ENST00000556809 NR5A1Q13285 461 aa25.53■■□□□ 1.68
PABPN1-206ENST00000556809 SAFBQ15424 915 aaKnown RBP eCLIP25.53■■□□□ 1.68
PABPN1-206ENST00000556809 UTP14CQ5TAP6 766 aaKnown RBP25.53■■□□□ 1.68
PABPN1-206ENST00000556809 ZNF365Q70YC5 407 aa25.53■■□□□ 1.68
PABPN1-206ENST00000556809 PLA2G4DQ86XP0 818 aa25.53■■□□□ 1.68
PABPN1-206ENST00000556809 CAGE1Q8TC20 777 aa25.53■■□□□ 1.68
PABPN1-206ENST00000556809 TNFRSF25Q93038 417 aa25.53■■□□□ 1.68
PABPN1-206ENST00000556809 RNPC3Q96LT9 517 aaKnown RBP25.53■■□□□ 1.68
PABPN1-206ENST00000556809 RNPEPQ9H4A4 650 aa25.53■■□□□ 1.68
PABPN1-206ENST00000556809 SLC9A2Q9UBY0 812 aa25.53■■□□□ 1.68
PABPN1-206ENST00000556809 BTBD18B2RXH4 712 aa25.52■■□□□ 1.68
PABPN1-206ENST00000556809 DHX15O43143 795 aaKnown RBP25.52■■□□□ 1.68
PABPN1-206ENST00000556809 IQCF3P0C7M6 154 aa25.52■■□□□ 1.68
PABPN1-206ENST00000556809 SMIM10L2AP0DMW4 78 aa25.52■■□□□ 1.68
PABPN1-206ENST00000556809 SMIM10L2BP0DMW5 78 aa25.52■■□□□ 1.68
PABPN1-206ENST00000556809 USP11P51784 963 aa25.52■■□□□ 1.68
PABPN1-206ENST00000556809 BFSP2Q13515 415 aa25.52■■□□□ 1.68
PABPN1-206ENST00000556809 PSRC1Q6PGN9 363 aaPredicted RBP25.52■■□□□ 1.68
PABPN1-206ENST00000556809 LENG9Q96B70 501 aa25.52■■□□□ 1.68
PABPN1-206ENST00000556809 INTS4Q96HW7 963 aaKnown RBP25.52■■□□□ 1.68
PABPN1-206ENST00000556809 ZNF215Q9UL58 517 aaPredicted RBP25.52■■□□□ 1.68
PABPN1-206ENST00000556809 LGR5O75473 907 aa25.51■■□□□ 1.67
PABPN1-206ENST00000556809 PTK7Q13308 1070 aa25.51■■□□□ 1.67
PABPN1-206ENST00000556809 INF2Q27J81 1249 aa25.51■■□□□ 1.67
PABPN1-206ENST00000556809 TRIM71Q2Q1W2 868 aaKnown RBP25.51■■□□□ 1.67
PABPN1-206ENST00000556809 PIK3AP1Q6ZUJ8 805 aa25.51■■□□□ 1.67
PABPN1-206ENST00000556809 WNT8BQ93098 351 aa25.51■■□□□ 1.67
PABPN1-206ENST00000556809 PCYT2Q99447 389 aa25.51■■□□□ 1.67
PABPN1-206ENST00000556809 SDF4Q9BRK5 362 aa25.51■■□□□ 1.67
PABPN1-206ENST00000556809 C17orf102A2RUQ5 167 aa25.5■■□□□ 1.67
PABPN1-206ENST00000556809 ATG7O95352 703 aa25.5■■□□□ 1.67
PABPN1-206ENST00000556809 ADAM17P78536 824 aa25.5■■□□□ 1.67
PABPN1-206ENST00000556809 EMSYQ7Z589 1322 aa25.5■■□□□ 1.67
PABPN1-206ENST00000556809 RETREG2Q8NC44 543 aa25.5■■□□□ 1.67
PABPN1-206ENST00000556809 AFAP1L1Q8TED9 768 aa25.5■■□□□ 1.67
PABPN1-206ENST00000556809 KAT6AQ92794 2004 aa25.5■■□□□ 1.67
PABPN1-206ENST00000556809 LAMA2P24043 3122 aaKnown RBP25.5■■□□□ 1.67
PABPN1-206ENST00000556809 CCNE2O96020 404 aa25.49■■□□□ 1.67
PABPN1-206ENST00000556809 RFC2P35250 354 aa25.49■■□□□ 1.67
PABPN1-206ENST00000556809 ACTR2P61160 394 aa25.49■■□□□ 1.67
PABPN1-206ENST00000556809 SETQ01105 290 aaPredicted RBP25.49■■□□□ 1.67
PABPN1-206ENST00000556809 GPNMBQ14956 572 aa25.49■■□□□ 1.67
PABPN1-206ENST00000556809 EARS2Q5JPH6 523 aaKnown RBP25.49■■□□□ 1.67
PABPN1-206ENST00000556809 SERINC5Q86VE9 423 aa25.49■■□□□ 1.67
PABPN1-206ENST00000556809 RPUSD2Q8IZ73 545 aaKnown RBP25.49■■□□□ 1.67
PABPN1-206ENST00000556809 CCDC155Q8N6L0 562 aa25.49■■□□□ 1.67
PABPN1-206ENST00000556809 HERVK_113Q902F9 699 aa25.49■■□□□ 1.67
PABPN1-206ENST00000556809 SETD4Q9NVD3 440 aa25.49■■□□□ 1.67
PABPN1-206ENST00000556809 TET1Q8NFU7 2136 aa25.48■■□□□ 1.67
PABPN1-206ENST00000556809 FAM205CA6NFA0 338 aa25.48■■□□□ 1.67
PABPN1-206ENST00000556809 IPO5O00410 1097 aaKnown RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms