RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 EMID1Q96A84 441 aaPredicted RBP8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 TIFAQ96CG3 184 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 SCLYQ96I15 445 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 GUCD1Q96NT3 240 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 CDX2Q99626 313 aaPredicted RBP8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 MYL10Q9BUA6 226 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 MLXIPQ9HAP2 919 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 SLC12A7Q9Y666 1083 aa8.87□□□□□ -0.99
HNRNPC-226ENST00000556628 BAZ2BQ9UIF8 2168 aaKnown RBP8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 TANC1Q9C0D5 1861 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 CDC45O75419 566 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 DGAT1O75907 488 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 GGPS1O95749 300 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 LIFRP42702 1097 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 NECTIN1Q15223 517 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 PTGISQ16647 500 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 RASIP1Q5U651 963 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 DEFB128Q7Z7B8 93 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 PPTC7Q8NI37 304 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 CAGE1Q8TC20 777 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 MYLIPQ8WY64 445 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 ZNF775Q96BV0 537 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 CCDC136Q96JN2 1154 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 SPATA33Q96N06 139 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 NEK1Q96PY6 1258 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 ALG1Q9BT22 464 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 FTOQ9C0B1 505 aaKnown RBP eCLIP8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 WNT8AQ9H1J5 351 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 TTYH1Q9H313 450 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 ZNF576Q9H609 170 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 SLC4A7Q9Y6M7 1214 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 DNAH12Q6ZR08 3092 aa8.86□□□□□ -0.99
HNRNPC-226ENST00000556628 RCCD1A6NED2 376 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 GRXCR1A8MXD5 290 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 NOP56O00567 594 aaKnown RBP8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 SORBS3O60504 671 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 PPFIA4O75335 1185 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 PLEKHA8P1O95397 391 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 PARNO95453 639 aaKnown RBP8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 RXRAP19793 462 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 PRR20EP86478 221 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 PRR20CP86479 221 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 PRR20DP86480 221 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 PRR20BP86481 221 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 PRR20AP86496 221 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 NEDD9Q14511 834 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 KRT32Q14532 448 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 SLC35G1Q2M3R5 365 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 CELF3Q5SZQ8 465 aaKnown RBP8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 XRRA1Q6P2D8 792 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 NLRX1Q86UT6 975 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 SESTD1Q86VW0 696 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 CCDC82Q8N4S0 544 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 PPP1R13LQ8WUF5 828 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 GAS2L1Q99501 681 aaPredicted RBP8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 LRRC2Q9BYS8 371 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 PBX4Q9BYU1 374 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 EHMT1Q9H9B1 1298 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 SLC28A3Q9HAS3 691 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 RBM28Q9NW13 759 aaKnown RBP8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 GBF1Q92538 1859 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 SCN5AQ14524 2016 aa8.85□□□□□ -0.99
HNRNPC-226ENST00000556628 FIBPO43427 364 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 S1PR4O95977 384 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 F2P00734 622 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 CFHP08603 1231 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 IQCF3P0C7M6 154 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 ZNF286BP0CG31 522 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 ATP2A2P16615 1042 aaKnown RBP8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 UBA1P22314 1058 aaKnown RBP8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 SSTR3P32745 418 aaPredicted RBP8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 RANBP2P49792 3224 aaKnown RBP8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 FGD1P98174 961 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 KIAA0753Q2KHM9 967 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 HSDL1Q3SXM5 330 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 MYSM1Q5VVJ2 828 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 GDF6Q6KF10 455 aaPredicted RBP8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 USP17L6PQ6QN14 398 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 SGMS1Q86VZ5 419 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 MICU3Q86XE3 530 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 RAB11FIP4Q86YS3 637 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 SRBD1Q8N5C6 995 aaKnown RBP8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 FANCBQ8NB91 859 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 MAFAQ8NHW3 353 aaPredicted RBP8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 IL31RAQ8NI17 732 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 AFAP1L1Q8TED9 768 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 KAT2BQ92831 832 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 PSTPIP2Q9H939 334 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 RTEL1Q9NZ71 1219 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 HDAC6Q9UBN7 1215 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 GTF2IRD1Q9UHL9 959 aa8.84□□□□□ -0.99
HNRNPC-226ENST00000556628 TRIP12Q14669 1992 aaPredicted RBP8.83□□□□□ -1
HNRNPC-226ENST00000556628 SZT2Q5T011 3432 aa8.83□□□□□ -1
HNRNPC-226ENST00000556628 SPDYE3A6NKU9 549 aa8.83□□□□□ -1
HNRNPC-226ENST00000556628 SPATA31C2B4DYI2 1134 aa8.83□□□□□ -1
HNRNPC-226ENST00000556628 KIF28PB7ZC32 967 aa8.83□□□□□ -1
HNRNPC-226ENST00000556628 HAS3O00219 553 aa8.83□□□□□ -1
HNRNPC-226ENST00000556628 PIK3CDO00329 1044 aa8.83□□□□□ -1
HNRNPC-226ENST00000556628 DLL1O00548 723 aa8.83□□□□□ -1
HNRNPC-226ENST00000556628 ZBTB43O43298 467 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms