RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 MCM5P33992 734 aa20.27■□□□□ 0.84
SDR39U1-219ENST00000556523 EPC2Q52LR7 807 aa20.27■□□□□ 0.84
SDR39U1-219ENST00000556523 TMTC2Q8N394 836 aa20.27■□□□□ 0.84
SDR39U1-219ENST00000556523 TOP1MTQ969P6 601 aa20.27■□□□□ 0.84
SDR39U1-219ENST00000556523 GPRASP2Q96D09 838 aa20.27■□□□□ 0.84
SDR39U1-219ENST00000556523 TMEM87BQ96K49 555 aa20.27■□□□□ 0.84
SDR39U1-219ENST00000556523 MEIS2O14770 477 aa20.26■□□□□ 0.83
SDR39U1-219ENST00000556523 PLEKHA8P1O95397 391 aa20.26■□□□□ 0.83
SDR39U1-219ENST00000556523 CALM1P0DP23 149 aa20.26■□□□□ 0.83
SDR39U1-219ENST00000556523 CALM2P0DP24 149 aa20.26■□□□□ 0.83
SDR39U1-219ENST00000556523 CALM3P0DP25 149 aa20.26■□□□□ 0.83
SDR39U1-219ENST00000556523 TCF7P36402 384 aaPredicted RBP20.26■□□□□ 0.83
SDR39U1-219ENST00000556523 IRX6P78412 446 aaPredicted RBP20.26■□□□□ 0.83
SDR39U1-219ENST00000556523 TAF2Q6P1X5 1199 aa20.26■□□□□ 0.83
SDR39U1-219ENST00000556523 RSPH3Q86UC2 560 aa20.26■□□□□ 0.83
SDR39U1-219ENST00000556523 PSTPIP2Q9H939 334 aa20.26■□□□□ 0.83
SDR39U1-219ENST00000556523 NLRC5Q86WI3 1866 aa20.26■□□□□ 0.83
SDR39U1-219ENST00000556523 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.25■□□□□ 0.83
SDR39U1-219ENST00000556523 SPDYE3A6NKU9 549 aa20.25■□□□□ 0.83
SDR39U1-219ENST00000556523 SH2B2O14492 632 aaPredicted RBP20.25■□□□□ 0.83
SDR39U1-219ENST00000556523 PPFIA1Q13136 1202 aa20.25■□□□□ 0.83
SDR39U1-219ENST00000556523 GPM6BQ13491 265 aa20.25■□□□□ 0.83
SDR39U1-219ENST00000556523 LEXMQ3ZCV2 418 aa20.25■□□□□ 0.83
SDR39U1-219ENST00000556523 FAM26DQ5JW98 314 aa20.25■□□□□ 0.83
SDR39U1-219ENST00000556523 FAM122AQ96E09 287 aa20.25■□□□□ 0.83
SDR39U1-219ENST00000556523 EPHX3Q9H6B9 360 aa20.25■□□□□ 0.83
SDR39U1-219ENST00000556523 EHMT1Q9H9B1 1298 aa20.25■□□□□ 0.83
SDR39U1-219ENST00000556523 HCN4Q9Y3Q4 1203 aa20.25■□□□□ 0.83
SDR39U1-219ENST00000556523 RALGAPA2Q2PPJ7 1873 aa20.24■□□□□ 0.83
SDR39U1-219ENST00000556523 GHRP10912 638 aa20.24■□□□□ 0.83
SDR39U1-219ENST00000556523 RXRAP19793 462 aa20.24■□□□□ 0.83
SDR39U1-219ENST00000556523 MARK3P27448 753 aa20.24■□□□□ 0.83
SDR39U1-219ENST00000556523 ADAM17P78536 824 aa20.24■□□□□ 0.83
SDR39U1-219ENST00000556523 TMEM31Q5JXX7 168 aa20.24■□□□□ 0.83
SDR39U1-219ENST00000556523 TMEM192Q8IY95 271 aa20.24■□□□□ 0.83
SDR39U1-219ENST00000556523 SRBD1Q8N5C6 995 aaKnown RBP20.24■□□□□ 0.83
SDR39U1-219ENST00000556523 SEPT1Q8WYJ6 367 aa20.24■□□□□ 0.83
SDR39U1-219ENST00000556523 GLG1Q92896 1179 aa20.24■□□□□ 0.83
SDR39U1-219ENST00000556523 OSBPL7Q9BZF2 842 aa20.24■□□□□ 0.83
SDR39U1-219ENST00000556523 ERAP1Q9NZ08 941 aa20.24■□□□□ 0.83
SDR39U1-219ENST00000556523 PKD2L1Q9P0L9 805 aa20.24■□□□□ 0.83
SDR39U1-219ENST00000556523 TUBE1Q9UJT0 475 aa20.24■□□□□ 0.83
SDR39U1-219ENST00000556523 TELO2Q9Y4R8 837 aa20.24■□□□□ 0.83
SDR39U1-219ENST00000556523 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.23■□□□□ 0.83
SDR39U1-219ENST00000556523 H3BNC9 293 aa20.23■□□□□ 0.83
SDR39U1-219ENST00000556523 KCNA2P16389 499 aa20.23■□□□□ 0.83
SDR39U1-219ENST00000556523 CTNNB1P35222 781 aa20.23■□□□□ 0.83
SDR39U1-219ENST00000556523 PLA2G5P39877 138 aa20.23■□□□□ 0.83
SDR39U1-219ENST00000556523 MTMR1Q13613 665 aa20.23■□□□□ 0.83
SDR39U1-219ENST00000556523 UBE2SQ16763 222 aa20.23■□□□□ 0.83
SDR39U1-219ENST00000556523 FIBCD1Q8N539 461 aa20.23■□□□□ 0.83
SDR39U1-219ENST00000556523 BANK1Q8NDB2 785 aa20.23■□□□□ 0.83
SDR39U1-219ENST00000556523 IL17RAQ96F46 866 aa20.23■□□□□ 0.83
SDR39U1-219ENST00000556523 SLC12A7Q9Y666 1083 aa20.23■□□□□ 0.83
SDR39U1-219ENST00000556523 LIFRP42702 1097 aa20.22■□□□□ 0.83
SDR39U1-219ENST00000556523 GRIK4Q16099 956 aa20.22■□□□□ 0.83
SDR39U1-219ENST00000556523 PTCRAQ6ISU1 281 aaPredicted RBP20.22■□□□□ 0.83
SDR39U1-219ENST00000556523 RUFY4Q6ZNE9 571 aa20.22■□□□□ 0.83
SDR39U1-219ENST00000556523 EP400NLQ6ZTU2 488 aa20.22■□□□□ 0.83
SDR39U1-219ENST00000556523 HEATR3Q7Z4Q2 680 aa20.22■□□□□ 0.83
SDR39U1-219ENST00000556523 RPAINQ86UA6 219 aa20.22■□□□□ 0.83
SDR39U1-219ENST00000556523 RAB11FIP4Q86YS3 637 aa20.22■□□□□ 0.83
SDR39U1-219ENST00000556523 CMTR1Q8N1G2 835 aaKnown RBP20.22■□□□□ 0.83
SDR39U1-219ENST00000556523 LRFN3Q9BTN0 628 aa20.22■□□□□ 0.83
SDR39U1-219ENST00000556523 SMARCAD1Q9H4L7 1026 aa20.22■□□□□ 0.83
SDR39U1-219ENST00000556523 RWDD3Q9Y3V2 267 aa20.22■□□□□ 0.83
SDR39U1-219ENST00000556523 ATP9AO75110 1047 aa20.21■□□□□ 0.83
SDR39U1-219ENST00000556523 CHRNA1P02708 482 aa20.21■□□□□ 0.83
SDR39U1-219ENST00000556523 RPLP2P05387 115 aaKnown RBP20.21■□□□□ 0.83
SDR39U1-219ENST00000556523 ITGB5P18084 799 aa20.21■□□□□ 0.83
SDR39U1-219ENST00000556523 SSTR3P32745 418 aaPredicted RBP20.21■□□□□ 0.83
SDR39U1-219ENST00000556523 PUS10Q3MIT2 529 aaKnown RBP20.21■□□□□ 0.83
SDR39U1-219ENST00000556523 MICU3Q86XE3 530 aa20.21■□□□□ 0.83
SDR39U1-219ENST00000556523 NSUN3Q9H649 340 aaKnown RBP20.21■□□□□ 0.83
SDR39U1-219ENST00000556523 UBIAD1Q9Y5Z9 338 aa20.21■□□□□ 0.83
SDR39U1-219ENST00000556523 ADGRA3Q8IWK6 1321 aa20.21■□□□□ 0.83
SDR39U1-219ENST00000556523 hCG_1642624A0A1W2PR95 340 aa20.2■□□□□ 0.82
SDR39U1-219ENST00000556523 SLC27A2O14975 620 aa20.2■□□□□ 0.82
SDR39U1-219ENST00000556523 NEFLP07196 543 aa20.2■□□□□ 0.82
SDR39U1-219ENST00000556523 IGBP1P78318 339 aa20.2■□□□□ 0.82
SDR39U1-219ENST00000556523 TCEAL5Q5H9L2 206 aa20.2■□□□□ 0.82
SDR39U1-219ENST00000556523 SYNE3Q6ZMZ3 975 aa20.2■□□□□ 0.82
SDR39U1-219ENST00000556523 TMTC3Q6ZXV5 915 aa20.2■□□□□ 0.82
SDR39U1-219ENST00000556523 CCDC82Q8N4S0 544 aa20.2■□□□□ 0.82
SDR39U1-219ENST00000556523 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.2■□□□□ 0.82
SDR39U1-219ENST00000556523 C11orf84Q9BUA3 381 aaPredicted RBP20.2■□□□□ 0.82
SDR39U1-219ENST00000556523 LSG1Q9H089 658 aaKnown RBP20.2■□□□□ 0.82
SDR39U1-219ENST00000556523 AZI2Q9H6S1 392 aa20.2■□□□□ 0.82
SDR39U1-219ENST00000556523 JPH1Q9HDC5 661 aaPredicted RBP20.2■□□□□ 0.82
SDR39U1-219ENST00000556523 PCDHA6Q9UN73 950 aa20.2■□□□□ 0.82
SDR39U1-219ENST00000556523 FAM50BQ9Y247 325 aa20.2■□□□□ 0.82
SDR39U1-219ENST00000556523 PCDHA8Q9Y5H6 950 aa20.2■□□□□ 0.82
SDR39U1-219ENST00000556523 GSTTP1A0A1W2PQM5 241 aa20.19■□□□□ 0.82
SDR39U1-219ENST00000556523 H3BQ06 376 aaPredicted RBP20.19■□□□□ 0.82
SDR39U1-219ENST00000556523 MAFGO15525 162 aa20.19■□□□□ 0.82
SDR39U1-219ENST00000556523 IL9P15248 144 aa20.19■□□□□ 0.82
SDR39U1-219ENST00000556523 MGAT3Q09327 533 aa20.19■□□□□ 0.82
SDR39U1-219ENST00000556523 LPIN1Q14693 890 aa20.19■□□□□ 0.82
SDR39U1-219ENST00000556523 CREB3L3Q68CJ9 461 aa20.19■□□□□ 0.82
SDR39U1-219ENST00000556523 TSHZ1Q6ZSZ6 1077 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms