RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 PCDHA1Q9Y5I3 950 aa16.16■□□□□ 0.18
ACTN1-219ENST00000556432 CACNA1HO95180 2353 aa16.16■□□□□ 0.18
ACTN1-219ENST00000556432 CFAP54Q96N23 3096 aa16.15■□□□□ 0.18
ACTN1-219ENST00000556432 B4E1Z4 1266 aa16.15■□□□□ 0.18
ACTN1-219ENST00000556432 GCOM1H8Y6P7 765 aaPredicted RBP16.15■□□□□ 0.18
ACTN1-219ENST00000556432 EYA4O95677 639 aa16.15■□□□□ 0.18
ACTN1-219ENST00000556432 CHRNA1P02708 482 aa16.15■□□□□ 0.18
ACTN1-219ENST00000556432 LINC00271P0C7V0 271 aa16.15■□□□□ 0.18
ACTN1-219ENST00000556432 POLR2MP0CAP2 368 aa16.15■□□□□ 0.18
ACTN1-219ENST00000556432 MFAP1P55081 439 aaKnown RBP16.15■□□□□ 0.18
ACTN1-219ENST00000556432 RRP1P56182 461 aaKnown RBP16.15■□□□□ 0.18
ACTN1-219ENST00000556432 FAM26DQ5JW98 314 aa16.15■□□□□ 0.18
ACTN1-219ENST00000556432 CYFIP1Q7L576 1253 aa16.15■□□□□ 0.18
ACTN1-219ENST00000556432 ADGRD2Q7Z7M1 963 aa16.15■□□□□ 0.18
ACTN1-219ENST00000556432 RBM23Q86U06 439 aaKnown RBP16.15■□□□□ 0.18
ACTN1-219ENST00000556432 ENAHQ8N8S7 591 aaPredicted RBP16.15■□□□□ 0.18
ACTN1-219ENST00000556432 SMRP1Q8NCR6 262 aa16.15■□□□□ 0.18
ACTN1-219ENST00000556432 MSLNLQ96KJ4 702 aa16.15■□□□□ 0.18
ACTN1-219ENST00000556432 RPGRIP1Q96KN7 1286 aa16.15■□□□□ 0.18
ACTN1-219ENST00000556432 BCAS3Q9H6U6 928 aa16.15■□□□□ 0.18
ACTN1-219ENST00000556432 MAP3K20Q9NYL2 800 aaKnown RBP16.15■□□□□ 0.18
ACTN1-219ENST00000556432 PLAGL2Q9UPG8 496 aa16.15■□□□□ 0.18
ACTN1-219ENST00000556432 USP15Q9Y4E8 981 aaPredicted RBP16.15■□□□□ 0.18
ACTN1-219ENST00000556432 SUPT16HQ9Y5B9 1047 aaKnown RBP16.15■□□□□ 0.18
ACTN1-219ENST00000556432 ZBTB5O15062 677 aa16.14■□□□□ 0.17
ACTN1-219ENST00000556432 NRIP1P48552 1158 aa16.14■□□□□ 0.17
ACTN1-219ENST00000556432 NEDD9Q14511 834 aa16.14■□□□□ 0.17
ACTN1-219ENST00000556432 ANKRD45Q5TZF3 282 aa16.14■□□□□ 0.17
ACTN1-219ENST00000556432 METTL7BQ6UX53 244 aa16.14■□□□□ 0.17
ACTN1-219ENST00000556432 RSPH3Q86UC2 560 aa16.14■□□□□ 0.17
ACTN1-219ENST00000556432 HOMER1Q86YM7 354 aa16.14■□□□□ 0.17
ACTN1-219ENST00000556432 EFHBQ8N7U6 833 aa16.14■□□□□ 0.17
ACTN1-219ENST00000556432 UBAC1Q9BSL1 405 aa16.14■□□□□ 0.17
ACTN1-219ENST00000556432 BARX2Q9UMQ3 279 aaPredicted RBP16.14■□□□□ 0.17
ACTN1-219ENST00000556432 USP34Q70CQ2 3546 aa16.14■□□□□ 0.17
ACTN1-219ENST00000556432 LOC730098B7Z3J9 87 aa16.13■□□□□ 0.17
ACTN1-219ENST00000556432 KLRF2D3W0D1 207 aa16.13■□□□□ 0.17
ACTN1-219ENST00000556432 ENPP3O14638 875 aa16.13■□□□□ 0.17
ACTN1-219ENST00000556432 PPP1R11O60927 126 aaPredicted RBP16.13■□□□□ 0.17
ACTN1-219ENST00000556432 VCPP55072 806 aaKnown RBP16.13■□□□□ 0.17
ACTN1-219ENST00000556432 GHRHRQ02643 423 aa16.13■□□□□ 0.17
ACTN1-219ENST00000556432 SIGLEC14Q08ET2 396 aa16.13■□□□□ 0.17
ACTN1-219ENST00000556432 LPIN1Q14693 890 aa16.13■□□□□ 0.17
ACTN1-219ENST00000556432 PAN2Q504Q3 1202 aaKnown RBP16.13■□□□□ 0.17
ACTN1-219ENST00000556432 RUFY4Q6ZNE9 571 aa16.13■□□□□ 0.17
ACTN1-219ENST00000556432 STAG2Q8N3U4 1231 aa16.13■□□□□ 0.17
ACTN1-219ENST00000556432 RILPL2Q969X0 211 aa16.13■□□□□ 0.17
ACTN1-219ENST00000556432 GPR20Q99678 358 aa16.13■□□□□ 0.17
ACTN1-219ENST00000556432 IRF2BPLQ9H1B7 796 aa16.13■□□□□ 0.17
ACTN1-219ENST00000556432 RC3H2Q9HBD1 1191 aaKnown RBP16.13■□□□□ 0.17
ACTN1-219ENST00000556432 CLEC1BQ9P126 229 aa16.13■□□□□ 0.17
ACTN1-219ENST00000556432 PCDHB15Q9Y5E8 787 aa16.13■□□□□ 0.17
ACTN1-219ENST00000556432 MRPL42Q9Y6G3 142 aaKnown RBP16.13■□□□□ 0.17
ACTN1-219ENST00000556432 PTPRZ1P23471 2315 aaPredicted RBP16.13■□□□□ 0.17
ACTN1-219ENST00000556432 SALL3Q9BXA9 1300 aa16.13■□□□□ 0.17
ACTN1-219ENST00000556432 DGKIO75912 1065 aa16.12■□□□□ 0.17
ACTN1-219ENST00000556432 ITGB1P05556 798 aa16.12■□□□□ 0.17
ACTN1-219ENST00000556432 IBSPP21815 317 aaPredicted RBP16.12■□□□□ 0.17
ACTN1-219ENST00000556432 DNAJB1P25685 340 aa16.12■□□□□ 0.17
ACTN1-219ENST00000556432 PDE1AP54750 535 aa16.12■□□□□ 0.17
ACTN1-219ENST00000556432 COASYQ13057 564 aa16.12■□□□□ 0.17
ACTN1-219ENST00000556432 CAMK1Q14012 370 aa16.12■□□□□ 0.17
ACTN1-219ENST00000556432 IFIT1BQ5T764 474 aaKnown RBP16.12■□□□□ 0.17
ACTN1-219ENST00000556432 TAF2Q6P1X5 1199 aa16.12■□□□□ 0.17
ACTN1-219ENST00000556432 ZBTB33Q86T24 672 aa16.12■□□□□ 0.17
ACTN1-219ENST00000556432 SAMD3Q8N6K7 520 aa16.12■□□□□ 0.17
ACTN1-219ENST00000556432 KLHL23Q8NBE8 558 aa16.12■□□□□ 0.17
ACTN1-219ENST00000556432 MICAL1Q8TDZ2 1067 aa16.12■□□□□ 0.17
ACTN1-219ENST00000556432 P2RX5Q93086 422 aa16.12■□□□□ 0.17
ACTN1-219ENST00000556432 ZNF689Q96CS4 500 aaPredicted RBP16.12■□□□□ 0.17
ACTN1-219ENST00000556432 PHF7Q9BWX1 381 aaPredicted RBP16.12■□□□□ 0.17
ACTN1-219ENST00000556432 RTEL1Q9NZ71 1219 aa16.12■□□□□ 0.17
ACTN1-219ENST00000556432 NRCAMQ92823 1304 aa16.12■□□□□ 0.17
ACTN1-219ENST00000556432 SPTBN4Q9H254 2564 aa16.11■□□□□ 0.17
ACTN1-219ENST00000556432 PPFIA3O75145 1194 aa16.11■□□□□ 0.17
ACTN1-219ENST00000556432 NT5C2P49902 561 aa16.11■□□□□ 0.17
ACTN1-219ENST00000556432 TRAF1Q13077 416 aa16.11■□□□□ 0.17
ACTN1-219ENST00000556432 PPFIA1Q13136 1202 aa16.11■□□□□ 0.17
ACTN1-219ENST00000556432 CBX2Q14781 532 aaPredicted RBP16.11■□□□□ 0.17
ACTN1-219ENST00000556432 NAALADL2Q58DX5 795 aa16.11■□□□□ 0.17
ACTN1-219ENST00000556432 TSHZ1Q6ZSZ6 1077 aa16.11■□□□□ 0.17
ACTN1-219ENST00000556432 CMTR2Q8IYT2 770 aaKnown RBP16.11■□□□□ 0.17
ACTN1-219ENST00000556432 SPPL3Q8TCT6 385 aa16.11■□□□□ 0.17
ACTN1-219ENST00000556432 POF1BQ8WVV4 589 aa16.11■□□□□ 0.17
ACTN1-219ENST00000556432 TLE6Q9H808 572 aa16.11■□□□□ 0.17
ACTN1-219ENST00000556432 EHMT1Q9H9B1 1298 aa16.11■□□□□ 0.17
ACTN1-219ENST00000556432 ZSWIM5Q9P217 1185 aa16.11■□□□□ 0.17
ACTN1-219ENST00000556432 KMT2EQ8IZD2 1858 aa16.1■□□□□ 0.17
ACTN1-219ENST00000556432 SPATA31C2B4DYI2 1134 aa16.1■□□□□ 0.17
ACTN1-219ENST00000556432 FIBPO43427 364 aa16.1■□□□□ 0.17
ACTN1-219ENST00000556432 STAM2O75886 525 aa16.1■□□□□ 0.17
ACTN1-219ENST00000556432 MARK3P27448 753 aa16.1■□□□□ 0.17
ACTN1-219ENST00000556432 AVPR2P30518 371 aa16.1■□□□□ 0.17
ACTN1-219ENST00000556432 ADAM17P78536 824 aa16.1■□□□□ 0.17
ACTN1-219ENST00000556432 FOXK2Q01167 660 aa16.1■□□□□ 0.17
ACTN1-219ENST00000556432 FBXO47Q5MNV8 452 aa16.1■□□□□ 0.17
ACTN1-219ENST00000556432 DNAJB3Q8WWF6 145 aa16.1■□□□□ 0.17
ACTN1-219ENST00000556432 TUBE1Q9UJT0 475 aa16.1■□□□□ 0.17
ACTN1-219ENST00000556432 TELO2Q9Y4R8 837 aa16.1■□□□□ 0.17
ACTN1-219ENST00000556432 PCDHGC5Q9Y5F6 944 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms