RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 ZNF658Q5TYW1 1059 aaPredicted RBP9.32□□□□□ -0.92
ATXN3-235ENST00000556082 CABP7Q86V35 215 aa9.32□□□□□ -0.92
ATXN3-235ENST00000556082 SPC24Q8NBT2 197 aa9.32□□□□□ -0.92
ATXN3-235ENST00000556082 ACER1Q8TDN7 264 aa9.32□□□□□ -0.92
ATXN3-235ENST00000556082 HOOK2Q96ED9 719 aa9.32□□□□□ -0.92
ATXN3-235ENST00000556082 MED15Q96RN5 788 aa9.32□□□□□ -0.92
ATXN3-235ENST00000556082 MMTAG2Q9BU76 263 aaKnown RBP9.32□□□□□ -0.92
ATXN3-235ENST00000556082 XPO4Q9C0E2 1151 aaKnown RBP9.32□□□□□ -0.92
ATXN3-235ENST00000556082 LRRC27Q9C0I9 530 aa9.32□□□□□ -0.92
ATXN3-235ENST00000556082 KCNF1Q9H3M0 494 aa9.32□□□□□ -0.92
ATXN3-235ENST00000556082 TTC12Q9H892 705 aaPredicted RBP9.32□□□□□ -0.92
ATXN3-235ENST00000556082 IFNKQ9P0W0 207 aa9.32□□□□□ -0.92
ATXN3-235ENST00000556082 DDX25Q9UHL0 483 aaKnown RBP9.32□□□□□ -0.92
ATXN3-235ENST00000556082 FEM1BQ9UK73 627 aa9.32□□□□□ -0.92
ATXN3-235ENST00000556082 BCS1LQ9Y276 419 aa9.32□□□□□ -0.92
ATXN3-235ENST00000556082 LRRC10BA6NIK2 292 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 CTNND1O60716 968 aaKnown RBP9.31□□□□□ -0.92
ATXN3-235ENST00000556082 RHOBTB3O94955 611 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 TDP2O95551 362 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 LMOD1P29536 600 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-235ENST00000556082 SREBF1P36956 1147 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 PPP1R2P41236 205 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 TECP42680 631 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 ECE1P42892 770 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 GMPSP49915 693 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-235ENST00000556082 FMR1Q06787 632 aaKnown RBP eCLIP9.31□□□□□ -0.92
ATXN3-235ENST00000556082 UBE2SQ16763 222 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 Q4G0T1 1027 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 COBLL1Q53SF7 1204 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 HYIQ5T013 277 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 SV2AQ7L0J3 742 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 LRRC8AQ8IWT6 810 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 KCTD17Q8N5Z5 321 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 LPAR1Q92633 364 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 HAS1Q92839 578 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 CALML4Q96GE6 196 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 NUP88Q99567 741 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-235ENST00000556082 ANO3Q9BYT9 981 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 KIAA1683Q9H0B3 1180 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 RANBP17Q9H2T7 1088 aaKnown RBP9.31□□□□□ -0.92
ATXN3-235ENST00000556082 ZNF395Q9H8N7 513 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-235ENST00000556082 KCNMB3Q9NPA1 279 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 KCND1Q9NSA2 647 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 LRWD1Q9UFC0 647 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 NRBP1Q9UHY1 535 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 CNOT7Q9UIV1 285 aaKnown RBP9.31□□□□□ -0.92
ATXN3-235ENST00000556082 RWDD2AQ9UIY3 292 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 PNMA2Q9UL42 364 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 NFE2L3Q9Y4A8 694 aa9.31□□□□□ -0.92
ATXN3-235ENST00000556082 BRCA1P38398 1863 aaKnown RBP9.31□□□□□ -0.92
ATXN3-235ENST00000556082 PP2D1A8MPX8 630 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 USP17L15C9J2P7 530 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 USP17L13C9JLJ4 530 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 USP17L11C9JVI0 530 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 USP17L18D6R9N7 530 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 USP17L22D6RA61 530 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 USP17L17D6RBQ6 530 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 USP17L19D6RCP7 530 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 USP17L20D6RJB6 530 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 SLC37A4O43826 429 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 KLRC4O43908 158 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 RAD21O60216 631 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 ATP1A3P13637 1013 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 PLCG1P19174 1290 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 CDC25AP30304 524 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 TXKP42681 527 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 TERF1P54274 439 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 UBASH3AP57075 661 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 ARHGAP4P98171 946 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 GHRHRQ02643 423 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 USP17L24Q0WX57 530 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 NOLC1Q14978 699 aaKnown RBP eCLIP9.3□□□□□ -0.92
ATXN3-235ENST00000556082 CCDC144BQ3MJ40 725 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 TMEM119Q4V9L6 283 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 KIAA1755Q5JYT7 1200 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 CDKAL1Q5VV42 579 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 USP17L6PQ6QN14 398 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 MIGA2Q7L4E1 593 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 SLFN12Q8IYM2 578 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 SAMD3Q8N6K7 520 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 GPR161Q8N6U8 529 aaKnown RBP9.3□□□□□ -0.92
ATXN3-235ENST00000556082 CCDC150Q8NCX0 1101 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 GIMAP8Q8ND71 665 aaPredicted RBP9.3□□□□□ -0.92
ATXN3-235ENST00000556082 CACTINQ8WUQ7 758 aaKnown RBP9.3□□□□□ -0.92
ATXN3-235ENST00000556082 CCDC47Q96A33 483 aaKnown RBP9.3□□□□□ -0.92
ATXN3-235ENST00000556082 FAM20AQ96MK3 541 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 ZNF830Q96NB3 372 aaPredicted RBP9.3□□□□□ -0.92
ATXN3-235ENST00000556082 ZNF112Q9UJU3 913 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 MYH4Q9Y623 1939 aa9.3□□□□□ -0.92
ATXN3-235ENST00000556082 PVALEFA0A1B0GWK0 134 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 SHTN1A0MZ66 631 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 SPDYE3A6NKU9 549 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 H7C1D1 291 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 OPLAHO14841 1288 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 SERPINC1P01008 464 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 GPC1P35052 558 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 KCNJ6P48051 423 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 RNF144AP50876 292 aaPredicted RBP9.29□□□□□ -0.92
ATXN3-235ENST00000556082 PRELPP51888 382 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 RAB15P59190 212 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms