RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 BANK1Q8NDB2 785 aa19.51■□□□□ 0.71
XRCC3-215ENST00000555964 LMBR1Q8WVP7 490 aa19.51■□□□□ 0.71
XRCC3-215ENST00000555964 GPRASP2Q96D09 838 aa19.51■□□□□ 0.71
XRCC3-215ENST00000555964 NCK2O43639 380 aa19.5■□□□□ 0.71
XRCC3-215ENST00000555964 PTH1RQ03431 593 aa19.5■□□□□ 0.71
XRCC3-215ENST00000555964 SEMA3FQ13275 785 aa19.5■□□□□ 0.71
XRCC3-215ENST00000555964 RPAINQ86UA6 219 aa19.5■□□□□ 0.71
XRCC3-215ENST00000555964 TRIM50Q86XT4 487 aa19.5■□□□□ 0.71
XRCC3-215ENST00000555964 FAM178BQ8IXR5 827 aa19.5■□□□□ 0.71
XRCC3-215ENST00000555964 ZNF654Q8IZM8 581 aa19.5■□□□□ 0.71
XRCC3-215ENST00000555964 GJD3Q8N144 294 aa19.5■□□□□ 0.71
XRCC3-215ENST00000555964 TMTC2Q8N394 836 aa19.5■□□□□ 0.71
XRCC3-215ENST00000555964 PIBF1Q8WXW3 757 aa19.5■□□□□ 0.71
XRCC3-215ENST00000555964 IL17RAQ96F46 866 aa19.5■□□□□ 0.71
XRCC3-215ENST00000555964 NSUN3Q9H649 340 aaKnown RBP19.5■□□□□ 0.71
XRCC3-215ENST00000555964 SENP2Q9HC62 589 aa19.5■□□□□ 0.71
XRCC3-215ENST00000555964 TTC3P53804 2025 aa19.49■□□□□ 0.71
XRCC3-215ENST00000555964 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.49■□□□□ 0.71
XRCC3-215ENST00000555964 RB1P06400 928 aa19.49■□□□□ 0.71
XRCC3-215ENST00000555964 SSTR3P32745 418 aaPredicted RBP19.49■□□□□ 0.71
XRCC3-215ENST00000555964 ADAM17P78536 824 aa19.49■□□□□ 0.71
XRCC3-215ENST00000555964 SP4Q02446 784 aa19.49■□□□□ 0.71
XRCC3-215ENST00000555964 MB21D2Q8IYB1 491 aaPredicted RBP19.49■□□□□ 0.71
XRCC3-215ENST00000555964 FIBCD1Q8N539 461 aa19.49■□□□□ 0.71
XRCC3-215ENST00000555964 IGDCC4Q8TDY8 1250 aa19.49■□□□□ 0.71
XRCC3-215ENST00000555964 PABPC5Q96DU9 382 aaKnown RBP19.49■□□□□ 0.71
XRCC3-215ENST00000555964 C11orf84Q9BUA3 381 aaPredicted RBP19.49■□□□□ 0.71
XRCC3-215ENST00000555964 LMAN2LQ9H0V9 348 aa19.49■□□□□ 0.71
XRCC3-215ENST00000555964 ERAP1Q9NZ08 941 aa19.49■□□□□ 0.71
XRCC3-215ENST00000555964 SGSM2O43147 1006 aa19.48■□□□□ 0.71
XRCC3-215ENST00000555964 CALM1P0DP23 149 aa19.48■□□□□ 0.71
XRCC3-215ENST00000555964 CALM2P0DP24 149 aa19.48■□□□□ 0.71
XRCC3-215ENST00000555964 CALM3P0DP25 149 aa19.48■□□□□ 0.71
XRCC3-215ENST00000555964 ALADP13716 330 aa19.48■□□□□ 0.71
XRCC3-215ENST00000555964 PPFIA1Q13136 1202 aa19.48■□□□□ 0.71
XRCC3-215ENST00000555964 USP17L6PQ6QN14 398 aa19.48■□□□□ 0.71
XRCC3-215ENST00000555964 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.48■□□□□ 0.71
XRCC3-215ENST00000555964 NEK9Q8TD19 979 aa19.48■□□□□ 0.71
XRCC3-215ENST00000555964 TNPO1Q92973 898 aaKnown RBP19.48■□□□□ 0.71
XRCC3-215ENST00000555964 BCAS3Q9H6U6 928 aa19.48■□□□□ 0.71
XRCC3-215ENST00000555964 EHMT1Q9H9B1 1298 aa19.48■□□□□ 0.71
XRCC3-215ENST00000555964 GRXCR2A6NFK2 248 aa19.47■□□□□ 0.71
XRCC3-215ENST00000555964 CCDC69A6NI79 296 aa19.47■□□□□ 0.71
XRCC3-215ENST00000555964 MEIS2O14770 477 aa19.47■□□□□ 0.71
XRCC3-215ENST00000555964 PDE4AP27815 886 aa19.47■□□□□ 0.71
XRCC3-215ENST00000555964 CTNNB1P35222 781 aa19.47■□□□□ 0.71
XRCC3-215ENST00000555964 TCF7P36402 384 aaPredicted RBP19.47■□□□□ 0.71
XRCC3-215ENST00000555964 ANTXR2P58335 489 aa19.47■□□□□ 0.71
XRCC3-215ENST00000555964 NFXL1Q6ZNB6 911 aa19.47■□□□□ 0.71
XRCC3-215ENST00000555964 SEPT1Q8WYJ6 367 aa19.47■□□□□ 0.71
XRCC3-215ENST00000555964 TMEM87BQ96K49 555 aa19.47■□□□□ 0.71
XRCC3-215ENST00000555964 YTHDC1Q96MU7 727 aaKnown RBP19.47■□□□□ 0.71
XRCC3-215ENST00000555964 PSTPIP2Q9H939 334 aa19.47■□□□□ 0.71
XRCC3-215ENST00000555964 LY9Q9HBG7 655 aa19.47■□□□□ 0.71
XRCC3-215ENST00000555964 TUBE1Q9UJT0 475 aa19.47■□□□□ 0.71
XRCC3-215ENST00000555964 SPDYE3A6NKU9 549 aa19.46■□□□□ 0.71
XRCC3-215ENST00000555964 MAFGO15525 162 aa19.46■□□□□ 0.71
XRCC3-215ENST00000555964 IL9P15248 144 aa19.46■□□□□ 0.71
XRCC3-215ENST00000555964 MCM5P33992 734 aa19.46■□□□□ 0.71
XRCC3-215ENST00000555964 TCEAL5Q5H9L2 206 aa19.46■□□□□ 0.71
XRCC3-215ENST00000555964 GLG1Q92896 1179 aa19.46■□□□□ 0.71
XRCC3-215ENST00000555964 MAP4K1Q92918 833 aa19.46■□□□□ 0.71
XRCC3-215ENST00000555964 SMARCAD1Q9H4L7 1026 aa19.46■□□□□ 0.71
XRCC3-215ENST00000555964 PRKAG3Q9UGI9 489 aa19.46■□□□□ 0.71
XRCC3-215ENST00000555964 MUC6Q6W4X9 2439 aa19.46■□□□□ 0.71
XRCC3-215ENST00000555964 ADGRA3Q8IWK6 1321 aa19.46■□□□□ 0.71
XRCC3-215ENST00000555964 PRR33A8MZF0 331 aa19.45■□□□□ 0.7
XRCC3-215ENST00000555964 C5orf67F2Z3F1 127 aa19.45■□□□□ 0.7
XRCC3-215ENST00000555964 GHRP10912 638 aa19.45■□□□□ 0.7
XRCC3-215ENST00000555964 KCNA2P16389 499 aa19.45■□□□□ 0.7
XRCC3-215ENST00000555964 MTMR1Q13613 665 aa19.45■□□□□ 0.7
XRCC3-215ENST00000555964 GRIK4Q16099 956 aa19.45■□□□□ 0.7
XRCC3-215ENST00000555964 EP400NLQ6ZTU2 488 aa19.45■□□□□ 0.7
XRCC3-215ENST00000555964 TEX2Q8IWB9 1127 aa19.45■□□□□ 0.7
XRCC3-215ENST00000555964 RBM8AQ9Y5S9 174 aaKnown RBP19.45■□□□□ 0.7
XRCC3-215ENST00000555964 ATG2AQ2TAZ0 1938 aa19.45■□□□□ 0.7
XRCC3-215ENST00000555964 RRN3P2A6NIE6 340 aa19.44■□□□□ 0.7
XRCC3-215ENST00000555964 M0QZ92 97 aa19.44■□□□□ 0.7
XRCC3-215ENST00000555964 PRC1O43663 620 aa19.44■□□□□ 0.7
XRCC3-215ENST00000555964 CHRNA1P02708 482 aa19.44■□□□□ 0.7
XRCC3-215ENST00000555964 HOXD11P31277 338 aaPredicted RBP19.44■□□□□ 0.7
XRCC3-215ENST00000555964 COL19A1Q14993 1142 aa19.44■□□□□ 0.7
XRCC3-215ENST00000555964 CSPP1Q1MSJ5 1256 aa19.44■□□□□ 0.7
XRCC3-215ENST00000555964 TSHZ1Q6ZSZ6 1077 aa19.44■□□□□ 0.7
XRCC3-215ENST00000555964 KHSRPQ92945 711 aaKnown RBP eCLIP19.44■□□□□ 0.7
XRCC3-215ENST00000555964 PPP2R3CQ969Q6 453 aa19.44■□□□□ 0.7
XRCC3-215ENST00000555964 MYL10Q9BUA6 226 aa19.44■□□□□ 0.7
XRCC3-215ENST00000555964 PLVAPQ9BX97 442 aa19.44■□□□□ 0.7
XRCC3-215ENST00000555964 FTHL17Q9BXU8 183 aa19.44■□□□□ 0.7
XRCC3-215ENST00000555964 CD320Q9NPF0 282 aa19.44■□□□□ 0.7
XRCC3-215ENST00000555964 C11orf16Q9NQ32 467 aa19.44■□□□□ 0.7
XRCC3-215ENST00000555964 TAF6LQ9Y6J9 622 aa19.44■□□□□ 0.7
XRCC3-215ENST00000555964 LOXHD1Q8IVV2 1947 aa19.43■□□□□ 0.7
XRCC3-215ENST00000555964 MBLAC1A4D2B0 266 aaPredicted RBP19.43■□□□□ 0.7
XRCC3-215ENST00000555964 FAM86C2PA6NEL3 165 aa19.43■□□□□ 0.7
XRCC3-215ENST00000555964 H3BQ06 376 aaPredicted RBP19.43■□□□□ 0.7
XRCC3-215ENST00000555964 BMPR1AP36894 532 aa19.43■□□□□ 0.7
XRCC3-215ENST00000555964 LIFRP42702 1097 aa19.43■□□□□ 0.7
XRCC3-215ENST00000555964 MGAT3Q09327 533 aa19.43■□□□□ 0.7
XRCC3-215ENST00000555964 IER5Q5VY09 327 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms