RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 CCNE2O96020 404 aa14.02□□□□□ -0.17
SHMT2-221ENST00000555773 PSAPP07602 524 aa14.02□□□□□ -0.17
SHMT2-221ENST00000555773 CAPN2P17655 700 aa14.02□□□□□ -0.17
SHMT2-221ENST00000555773 CPT1AP50416 773 aa14.02□□□□□ -0.17
SHMT2-221ENST00000555773 ACTR2P61160 394 aa14.02□□□□□ -0.17
SHMT2-221ENST00000555773 KRT79Q5XKE5 535 aa14.02□□□□□ -0.17
SHMT2-221ENST00000555773 NCAPH2Q6IBW4 605 aa14.02□□□□□ -0.17
SHMT2-221ENST00000555773 ABHD15Q6UXT9 468 aa14.02□□□□□ -0.17
SHMT2-221ENST00000555773 MIER3Q7Z3K6 550 aa14.02□□□□□ -0.17
SHMT2-221ENST00000555773 TLK2Q86UE8 772 aa14.02□□□□□ -0.17
SHMT2-221ENST00000555773 KCTD17Q8N5Z5 321 aa14.02□□□□□ -0.17
SHMT2-221ENST00000555773 ZNF333Q96JL9 665 aa14.02□□□□□ -0.17
SHMT2-221ENST00000555773 CLIC6Q96NY7 704 aa14.02□□□□□ -0.17
SHMT2-221ENST00000555773 GPR20Q99678 358 aa14.02□□□□□ -0.17
SHMT2-221ENST00000555773 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.02□□□□□ -0.176e-7■□□□□ 8.9
SHMT2-221ENST00000555773 CSRNP2Q9H175 543 aa14.02□□□□□ -0.17
SHMT2-221ENST00000555773 UPF3AQ9H1J1 476 aaKnown RBP14.02□□□□□ -0.17
SHMT2-221ENST00000555773 GDPD2Q9HCC8 539 aa14.02□□□□□ -0.17
SHMT2-221ENST00000555773 PLXNA1Q9UIW2 1896 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 A0A1W2PQ27 194 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 A0A1W2PQ64 194 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 A0A1W2PQD8 194 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 GSTTP1A0A1W2PQM5 241 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 EML1O00423 815 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 ADCY6O43306 1168 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 ZEB2O60315 1214 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 KPNA6O60684 536 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 DKC1O60832 514 aaKnown RBP eCLIP14.01□□□□□ -0.17
SHMT2-221ENST00000555773 P4HBP07237 508 aaKnown RBP14.01□□□□□ -0.17
SHMT2-221ENST00000555773 HOXD8P13378 290 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-221ENST00000555773 CCL5P13501 91 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 MUTP22033 750 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 CMA1P23946 247 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 UBA7P41226 1012 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 DGKDQ16760 1214 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 HSDL1Q3SXM5 330 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 GJC2Q5T442 439 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-221ENST00000555773 HAUS3Q68CZ6 603 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 LHX8Q68G74 356 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 NEK9Q8TD19 979 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 AFG1LQ8WV93 481 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 HSD17B14Q9BPX1 270 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 POLR3CQ9BUI4 534 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-221ENST00000555773 CCSER1Q9C0I3 900 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 RNF208Q9H0X6 261 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 UNC93B1Q9H1C4 597 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 XPNPEP3Q9NQH7 507 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 PAK6Q9NQU5 681 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-221ENST00000555773 SAMM50Q9Y512 469 aa14.01□□□□□ -0.17
SHMT2-221ENST00000555773 IGKV6D-21A0A0A0MT36 114 aa14□□□□□ -0.17
SHMT2-221ENST00000555773 POTEFA5A3E0 1075 aa14□□□□□ -0.17
SHMT2-221ENST00000555773 POTEMA6NI47 508 aa14□□□□□ -0.17
SHMT2-221ENST00000555773 CHMP2AO43633 222 aa14□□□□□ -0.17
SHMT2-221ENST00000555773 SORBS3O60504 671 aa14□□□□□ -0.17
SHMT2-221ENST00000555773 SUPT20HL2P0C7V6 817 aa14□□□□□ -0.17
SHMT2-221ENST00000555773 RPA1P27694 616 aa14□□□□□ -0.17
SHMT2-221ENST00000555773 TXLNAP40222 546 aa14□□□□□ -0.17
SHMT2-221ENST00000555773 SP4Q02446 784 aa14□□□□□ -0.17
SHMT2-221ENST00000555773 GRIN1Q05586 938 aa14□□□□□ -0.17
SHMT2-221ENST00000555773 FSCN1Q16658 493 aaKnown RBP14□□□□□ -0.17
SHMT2-221ENST00000555773 FAM160B1Q5W0V3 765 aa14□□□□□ -0.17
SHMT2-221ENST00000555773 PLPPR4Q7Z2D5 763 aa14□□□□□ -0.17
SHMT2-221ENST00000555773 ARRDC4Q8NCT1 418 aa14□□□□□ -0.17
SHMT2-221ENST00000555773 EIF2AK1Q9BQI3 630 aaKnown RBP14□□□□□ -0.17
SHMT2-221ENST00000555773 MCOLN1Q9GZU1 580 aa14□□□□□ -0.17
SHMT2-221ENST00000555773 AZI2Q9H6S1 392 aa14□□□□□ -0.17
SHMT2-221ENST00000555773 TUFT1Q9NNX1 390 aa14□□□□□ -0.17
SHMT2-221ENST00000555773 FAM13BQ9NYF5 915 aa14□□□□□ -0.17
SHMT2-221ENST00000555773 ADAMTS4O75173 837 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 PRPF40AO75400 957 aaKnown RBP13.99□□□□□ -0.17
SHMT2-221ENST00000555773 LGR5O75473 907 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 SLITRK3O94933 977 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 MMP3P08254 477 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 C6orf222P0C671 652 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-221ENST00000555773 CST5P28325 142 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-221ENST00000555773 TCF7P36402 384 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-221ENST00000555773 QARSP47897 775 aaKnown RBP13.99□□□□□ -0.17
SHMT2-221ENST00000555773 SLC26A2P50443 739 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 STAT5BP51692 787 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 PSMC5P62195 406 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 MTFR1Q15390 333 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 GNASQ5JWF2 1037 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 RESP18Q5W5W9 173 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 SWSAP1Q6NVH7 229 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 SHC4Q6S5L8 630 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 RNF180Q86T96 592 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 PCSK9Q8NBP7 692 aaKnown RBP13.99□□□□□ -0.17
SHMT2-221ENST00000555773 KLHDC9Q8NEP7 349 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 AFAP1L1Q8TED9 768 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 SNX29Q8TEQ0 813 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 ATP6V0A1Q93050 837 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 CALML4Q96GE6 196 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 SMARCAD1Q9H4L7 1026 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 ZSWIM4Q9H7M6 989 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 CCDC39Q9UFE4 941 aa13.99□□□□□ -0.17
SHMT2-221ENST00000555773 MAFBQ9Y5Q3 323 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-221ENST00000555773 SYNRGQ9UMZ2 1314 aa13.98□□□□□ -0.17
SHMT2-221ENST00000555773 FAM237AA0A1B0GTK4 181 aa13.98□□□□□ -0.17
SHMT2-221ENST00000555773 BACH1O14867 736 aa13.98□□□□□ -0.17
SHMT2-221ENST00000555773 CTAGE5O15320 804 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms