RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 PNMA6FA0A0J9YX94 578 aa12.51□□□□□ -0.41
TDP1-212ENST00000555565 LINC01565O15544 149 aa12.51□□□□□ -0.41
TDP1-212ENST00000555565 THPOP40225 353 aa12.51□□□□□ -0.41
TDP1-212ENST00000555565 CAMK1Q14012 370 aa12.51□□□□□ -0.41
TDP1-212ENST00000555565 COL9A3Q14050 684 aaPredicted RBP12.51□□□□□ -0.41
TDP1-212ENST00000555565 VSIG10LQ86VR7 867 aa12.51□□□□□ -0.41
TDP1-212ENST00000555565 SAMD3Q8N6K7 520 aa12.51□□□□□ -0.41
TDP1-212ENST00000555565 IL31RAQ8NI17 732 aa12.51□□□□□ -0.41
TDP1-212ENST00000555565 PPTC7Q8NI37 304 aa12.51□□□□□ -0.41
TDP1-212ENST00000555565 PBXIP1Q96AQ6 731 aa12.51□□□□□ -0.41
TDP1-212ENST00000555565 MSLNLQ96KJ4 702 aa12.51□□□□□ -0.41
TDP1-212ENST00000555565 YME1L1Q96TA2 773 aa12.51□□□□□ -0.41
TDP1-212ENST00000555565 POP1Q99575 1024 aaKnown RBP12.51□□□□□ -0.41
TDP1-212ENST00000555565 C16orf70Q9BSU1 422 aa12.51□□□□□ -0.41
TDP1-212ENST00000555565 KATNAL1Q9BW62 490 aa12.51□□□□□ -0.41
TDP1-212ENST00000555565 LSG1Q9H089 658 aaKnown RBP12.51□□□□□ -0.41
TDP1-212ENST00000555565 LY9Q9HBG7 655 aa12.51□□□□□ -0.41
TDP1-212ENST00000555565 CACNA1HO95180 2353 aa12.5□□□□□ -0.41
TDP1-212ENST00000555565 LOC730098B7Z3J9 87 aa12.5□□□□□ -0.41
TDP1-212ENST00000555565 STXBP3O00186 592 aa12.5□□□□□ -0.41
TDP1-212ENST00000555565 GFRA3O60609 400 aa12.5□□□□□ -0.41
TDP1-212ENST00000555565 PPFIA4O75335 1185 aa12.5□□□□□ -0.41
TDP1-212ENST00000555565 UPP2O95045 317 aa12.5□□□□□ -0.41
TDP1-212ENST00000555565 EYA4O95677 639 aa12.5□□□□□ -0.41
TDP1-212ENST00000555565 MYCLP12524 364 aaPredicted RBP12.5□□□□□ -0.41
TDP1-212ENST00000555565 BMPR1AP36894 532 aa12.5□□□□□ -0.41
TDP1-212ENST00000555565 TRAF1Q13077 416 aa12.5□□□□□ -0.41
TDP1-212ENST00000555565 ADAM15Q13444 863 aa12.5□□□□□ -0.41
TDP1-212ENST00000555565 SMAD4Q13485 552 aaKnown RBP12.5□□□□□ -0.41
TDP1-212ENST00000555565 LAMC2Q13753 1193 aa12.5□□□□□ -0.41
TDP1-212ENST00000555565 PGM5Q15124 567 aa12.5□□□□□ -0.41
TDP1-212ENST00000555565 HSDL1Q3SXM5 330 aa12.5□□□□□ -0.41
TDP1-212ENST00000555565 MYSM1Q5VVJ2 828 aa12.5□□□□□ -0.41
TDP1-212ENST00000555565 CATIPQ7Z7H3 387 aa12.5□□□□□ -0.41
TDP1-212ENST00000555565 ESYT1Q9BSJ8 1104 aa12.5□□□□□ -0.41
TDP1-212ENST00000555565 RC3H2Q9HBD1 1191 aaKnown RBP12.5□□□□□ -0.41
TDP1-212ENST00000555565 MRVI1Q9Y6F6 885 aa12.5□□□□□ -0.41
TDP1-212ENST00000555565 ZDBF2Q9HCK1 2354 aa12.49□□□□□ -0.41
TDP1-212ENST00000555565 GCOM1H8Y6P7 765 aaPredicted RBP12.49□□□□□ -0.41
TDP1-212ENST00000555565 PRC1O43663 620 aa12.49□□□□□ -0.41
TDP1-212ENST00000555565 RB1P06400 928 aa12.49□□□□□ -0.41
TDP1-212ENST00000555565 POLR2MP0CAP2 368 aa12.49□□□□□ -0.41
TDP1-212ENST00000555565 ZXDAP98168 799 aa12.49□□□□□ -0.41
TDP1-212ENST00000555565 CBX2Q14781 532 aaPredicted RBP12.49□□□□□ -0.41
TDP1-212ENST00000555565 PKN1Q16512 942 aa12.49□□□□□ -0.41
TDP1-212ENST00000555565 FCHSD1Q86WN1 690 aa12.49□□□□□ -0.41
TDP1-212ENST00000555565 DHX37Q8IY37 1157 aaKnown RBP12.49□□□□□ -0.41
TDP1-212ENST00000555565 ZNF654Q8IZM8 581 aa12.49□□□□□ -0.41
TDP1-212ENST00000555565 FBXL6Q8N531 539 aa12.49□□□□□ -0.41
TDP1-212ENST00000555565 PIBF1Q8WXW3 757 aa12.49□□□□□ -0.41
TDP1-212ENST00000555565 ZFP91Q96JP5 570 aaPredicted RBP12.49□□□□□ -0.41
TDP1-212ENST00000555565 MAP3K14Q99558 947 aa12.49□□□□□ -0.41
TDP1-212ENST00000555565 PRRX2Q99811 253 aa12.49□□□□□ -0.41
TDP1-212ENST00000555565 MYL10Q9BUA6 226 aa12.49□□□□□ -0.41
TDP1-212ENST00000555565 LMAN2LQ9H0V9 348 aa12.49□□□□□ -0.41
TDP1-212ENST00000555565 FAM86C1Q9NVL1 165 aa12.49□□□□□ -0.41
TDP1-212ENST00000555565 CLEC1BQ9P126 229 aa12.49□□□□□ -0.41
TDP1-212ENST00000555565 SLC27A2O14975 620 aa12.48□□□□□ -0.41
TDP1-212ENST00000555565 TREHO43280 583 aa12.48□□□□□ -0.41
TDP1-212ENST00000555565 DDAH1O94760 285 aa12.48□□□□□ -0.41
TDP1-212ENST00000555565 VCPP55072 806 aaKnown RBP12.48□□□□□ -0.41
TDP1-212ENST00000555565 FOXK2Q01167 660 aa12.48□□□□□ -0.41
TDP1-212ENST00000555565 SP2Q02086 613 aa12.48□□□□□ -0.41
TDP1-212ENST00000555565 SKAP1Q86WV1 359 aa12.48□□□□□ -0.41
TDP1-212ENST00000555565 SEPT8Q92599 483 aa12.48□□□□□ -0.41
TDP1-212ENST00000555565 GPKOWQ92917 476 aaPredicted RBP eCLIP12.48□□□□□ -0.412e-6■■■□□ 15.9
TDP1-212ENST00000555565 CLP1Q92989 425 aaKnown RBP12.48□□□□□ -0.41
TDP1-212ENST00000555565 IL17RAQ96F46 866 aa12.48□□□□□ -0.41
TDP1-212ENST00000555565 ASIC4Q96FT7 647 aa12.48□□□□□ -0.41
TDP1-212ENST00000555565 MTA3Q9BTC8 594 aa12.48□□□□□ -0.41
TDP1-212ENST00000555565 SPZ1Q9BXG8 430 aa12.48□□□□□ -0.41
TDP1-212ENST00000555565 IFIH1Q9BYX4 1025 aaKnown RBP12.48□□□□□ -0.41
TDP1-212ENST00000555565 CD207Q9UJ71 328 aa12.48□□□□□ -0.41
TDP1-212ENST00000555565 NLRC5Q86WI3 1866 aa12.48□□□□□ -0.41
TDP1-212ENST00000555565 KMT2EQ8IZD2 1858 aa12.48□□□□□ -0.41
TDP1-212ENST00000555565 SPTBN4Q9H254 2564 aa12.47□□□□□ -0.41
TDP1-212ENST00000555565 SH2B2O14492 632 aaPredicted RBP12.47□□□□□ -0.41
TDP1-212ENST00000555565 SORBS3O60504 671 aa12.47□□□□□ -0.41
TDP1-212ENST00000555565 GGPS1O95749 300 aa12.47□□□□□ -0.41
TDP1-212ENST00000555565 TGFB3P10600 412 aa12.47□□□□□ -0.41
TDP1-212ENST00000555565 UBA1P22314 1058 aaKnown RBP12.47□□□□□ -0.41
TDP1-212ENST00000555565 DNAJB1P25685 340 aa12.47□□□□□ -0.41
TDP1-212ENST00000555565 CCND2P30279 289 aa12.47□□□□□ -0.41
TDP1-212ENST00000555565 MCM5P33992 734 aa12.47□□□□□ -0.41
TDP1-212ENST00000555565 CTNNB1P35222 781 aa12.47□□□□□ -0.41
TDP1-212ENST00000555565 NECTIN1Q15223 517 aa12.47□□□□□ -0.41
TDP1-212ENST00000555565 CELF3Q5SZQ8 465 aaKnown RBP12.47□□□□□ -0.41
TDP1-212ENST00000555565 CREB3L3Q68CJ9 461 aa12.47□□□□□ -0.41
TDP1-212ENST00000555565 KCNV1Q6PIU1 500 aa12.47□□□□□ -0.41
TDP1-212ENST00000555565 CASC1Q6TDU7 716 aa12.47□□□□□ -0.41
TDP1-212ENST00000555565 CTCFLQ8NI51 663 aaPredicted RBP12.47□□□□□ -0.41
TDP1-212ENST00000555565 ZNF689Q96CS4 500 aaPredicted RBP12.47□□□□□ -0.41
TDP1-212ENST00000555565 SPATA33Q96N06 139 aa12.47□□□□□ -0.41
TDP1-212ENST00000555565 C11orf84Q9BUA3 381 aaPredicted RBP12.47□□□□□ -0.41
TDP1-212ENST00000555565 RNPEPQ9H4A4 650 aa12.47□□□□□ -0.41
TDP1-212ENST00000555565 IGFLR1Q9H665 355 aa12.47□□□□□ -0.41
TDP1-212ENST00000555565 BCAS3Q9H6U6 928 aa12.47□□□□□ -0.41
TDP1-212ENST00000555565 RALGAPA2Q2PPJ7 1873 aa12.46□□□□□ -0.41
TDP1-212ENST00000555565 FRMPD4Q14CM0 1322 aa12.46□□□□□ -0.41
TDP1-212ENST00000555565 PROB1E7EW31 1015 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms