RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 PABPC4Q13310 644 aaKnown RBP eCLIP16.11■□□□□ 0.17
IFT43-209ENST00000555305 VGLL4Q14135 290 aa16.11■□□□□ 0.17
IFT43-209ENST00000555305 PGM5Q15124 567 aa16.11■□□□□ 0.17
IFT43-209ENST00000555305 PTPN14Q15678 1187 aa16.11■□□□□ 0.17
IFT43-209ENST00000555305 MUM1L1Q5H9M0 696 aa16.11■□□□□ 0.17
IFT43-209ENST00000555305 SNRNP48Q6IEG0 339 aaKnown RBP16.11■□□□□ 0.17
IFT43-209ENST00000555305 CREBRFQ8IUR6 639 aa16.11■□□□□ 0.17
IFT43-209ENST00000555305 C17orf53Q8N3J3 647 aaPredicted RBP16.11■□□□□ 0.17
IFT43-209ENST00000555305 NSUN6Q8TEA1 469 aaKnown RBP16.11■□□□□ 0.17
IFT43-209ENST00000555305 CDHR1Q96JP9 859 aa16.11■□□□□ 0.17
IFT43-209ENST00000555305 CNOT6LQ96LI5 555 aaKnown RBP16.11■□□□□ 0.17
IFT43-209ENST00000555305 SEMA6BQ9H3T3 888 aa16.11■□□□□ 0.17
IFT43-209ENST00000555305 ACAD9Q9H845 621 aa16.11■□□□□ 0.17
IFT43-209ENST00000555305 PXMP2Q9NR77 195 aa16.11■□□□□ 0.17
IFT43-209ENST00000555305 SNCAIPQ9Y6H5 919 aa16.11■□□□□ 0.17
IFT43-209ENST00000555305 EML1O00423 815 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 MFAP3LO75121 409 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 CCND2P30279 289 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 SFNP31947 248 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 MTIF2P46199 727 aaKnown RBP16.1■□□□□ 0.17
IFT43-209ENST00000555305 PPATQ06203 517 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 GIT2Q14161 759 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 EDRF1Q3B7T1 1238 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 ARSHQ5FYA8 562 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 STXBP4Q6ZWJ1 553 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 NLRX1Q86UT6 975 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 TPH2Q8IWU9 490 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 PROCA1Q8NCQ7 364 aaPredicted RBP16.1■□□□□ 0.17
IFT43-209ENST00000555305 CHST13Q8NET6 341 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 RDM1Q8NG50 284 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 BHMT2Q9H2M3 363 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 AGO4Q9HCK5 861 aaKnown RBP16.1■□□□□ 0.17
IFT43-209ENST00000555305 OLFML3Q9NRN5 406 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 COL20A1Q9P218 1284 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 FBXO40Q9UH90 709 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 ZNF214Q9UL59 606 aaPredicted RBP16.1■□□□□ 0.17
IFT43-209ENST00000555305 ODF2LQ9ULJ1 636 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 PCDHA2Q9Y5H9 948 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 P4HBP07237 508 aaKnown RBP16.1■□□□□ 0.17
IFT43-209ENST00000555305 ARP10275 920 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 JAK3P52333 1124 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 UBXN2AP68543 259 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 CYP4A11Q02928 519 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 NSMFQ6X4W1 530 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.1■□□□□ 0.17
IFT43-209ENST00000555305 MIER3Q7Z3K6 550 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 ANKRD13AQ8IZ07 590 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 GPRASP2Q96D09 838 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 PDCD2LQ9BRP1 358 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 NOC4LQ9BVI4 516 aaKnown RBP16.1■□□□□ 0.17
IFT43-209ENST00000555305 UNC45AQ9H3U1 944 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 ZSWIM4Q9H7M6 989 aa16.1■□□□□ 0.17
IFT43-209ENST00000555305 R3HCC1Q9Y3T6 440 aaKnown RBP16.1■□□□□ 0.17
IFT43-209ENST00000555305 PHIPQ8WWQ0 1821 aa16.09■□□□□ 0.17
IFT43-209ENST00000555305 IQCA1LA6NCM1 817 aa16.09■□□□□ 0.17
IFT43-209ENST00000555305 CXCL11O14625 94 aa16.09■□□□□ 0.17
IFT43-209ENST00000555305 KRT76Q01546 638 aa16.09■□□□□ 0.17
IFT43-209ENST00000555305 RBL2Q08999 1139 aa16.09■□□□□ 0.17
IFT43-209ENST00000555305 DGKZQ13574 1117 aa16.09■□□□□ 0.17
IFT43-209ENST00000555305 MAN2A1Q16706 1144 aa16.09■□□□□ 0.17
IFT43-209ENST00000555305 TSR1Q2NL82 804 aaKnown RBP16.09■□□□□ 0.17
IFT43-209ENST00000555305 NYAP1Q6ZVC0 841 aa16.09■□□□□ 0.17
IFT43-209ENST00000555305 ZNF507Q8TCN5 953 aa16.09■□□□□ 0.17
IFT43-209ENST00000555305 DYDC2Q96IM9 177 aa16.09■□□□□ 0.17
IFT43-209ENST00000555305 TAAR1Q96RJ0 339 aa16.09■□□□□ 0.17
IFT43-209ENST00000555305 UBE4BO95155 1302 aa16.08■□□□□ 0.17
IFT43-209ENST00000555305 CHMP2AO43633 222 aa16.08■□□□□ 0.17
IFT43-209ENST00000555305 DKC1O60832 514 aaKnown RBP eCLIP16.08■□□□□ 0.17
IFT43-209ENST00000555305 LYPLA2O95372 231 aa16.08■□□□□ 0.17
IFT43-209ENST00000555305 TNNT1P13805 278 aa16.08■□□□□ 0.17
IFT43-209ENST00000555305 YBX3P16989 372 aaKnown RBP eCLIP16.08■□□□□ 0.17
IFT43-209ENST00000555305 FECHP22830 423 aa16.08■□□□□ 0.17
IFT43-209ENST00000555305 PSMC6P62333 389 aa16.08■□□□□ 0.17
IFT43-209ENST00000555305 BMT2Q1RMZ1 405 aa16.08■□□□□ 0.17
IFT43-209ENST00000555305 ZCWPW2Q504Y3 356 aa16.08■□□□□ 0.17
IFT43-209ENST00000555305 FIGNQ5HY92 759 aa16.08■□□□□ 0.17
IFT43-209ENST00000555305 E4F1Q66K89 784 aaPredicted RBP16.08■□□□□ 0.17
IFT43-209ENST00000555305 SLC30A10Q6XR72 485 aa16.08■□□□□ 0.17
IFT43-209ENST00000555305 ERO1BQ86YB8 467 aa16.08■□□□□ 0.17
IFT43-209ENST00000555305 TMTC1Q8IUR5 882 aa16.08■□□□□ 0.17
IFT43-209ENST00000555305 TMEM139Q8IV31 216 aa16.08■□□□□ 0.17
IFT43-209ENST00000555305 UIMC1Q96RL1 719 aa16.08■□□□□ 0.17
IFT43-209ENST00000555305 REEP2Q9BRK0 252 aa16.08■□□□□ 0.17
IFT43-209ENST00000555305 TIPINQ9BVW5 301 aa16.08■□□□□ 0.17
IFT43-209ENST00000555305 RGL1Q9NZL6 768 aa16.08■□□□□ 0.17
IFT43-209ENST00000555305 PFASO15067 1338 aa16.08■□□□□ 0.16
IFT43-209ENST00000555305 UNCXA6NJT0 531 aa16.08■□□□□ 0.16
IFT43-209ENST00000555305 SPDYE16A6NNV3 312 aaPredicted RBP16.08■□□□□ 0.16
IFT43-209ENST00000555305 PES1O00541 588 aaKnown RBP16.08■□□□□ 0.16
IFT43-209ENST00000555305 EIF3DO15371 548 aaKnown RBP eCLIP16.08■□□□□ 0.16
IFT43-209ENST00000555305 COBLO75128 1261 aa16.08■□□□□ 0.16
IFT43-209ENST00000555305 GYPCP04921 128 aa16.08■□□□□ 0.16
IFT43-209ENST00000555305 EIF2AK2P19525 551 aaKnown RBP16.08■□□□□ 0.16
IFT43-209ENST00000555305 COPB2P35606 906 aa16.08■□□□□ 0.16
IFT43-209ENST00000555305 ADKP55263 362 aaKnown RBP16.08■□□□□ 0.16
IFT43-209ENST00000555305 MARSP56192 900 aaKnown RBP16.08■□□□□ 0.16
IFT43-209ENST00000555305 MRPS9P82933 396 aaKnown RBP16.08■□□□□ 0.16
IFT43-209ENST00000555305 TBC1D8BQ0IIM8 1120 aa16.08■□□□□ 0.16
IFT43-209ENST00000555305 BAATQ14032 418 aaPredicted RBP16.08■□□□□ 0.16
IFT43-209ENST00000555305 CTTNQ14247 550 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms