RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	MSC	O60682	206 aa		7.5	□□□□□ -1.21
PSMC6-208	ENST00000554956	FAM153B	P0C7A2	387 aa		7.5	□□□□□ -1.21
PSMC6-208	ENST00000554956	LINC00310	P59036	64 aa		7.5	□□□□□ -1.21
PSMC6-208	ENST00000554956	KCNA10	Q16322	511 aa		7.5	□□□□□ -1.21
PSMC6-208	ENST00000554956	KCNT2	Q6UVM3	1135 aa		7.5	□□□□□ -1.21
PSMC6-208	ENST00000554956	CEP68	Q76N32	757 aa		7.5	□□□□□ -1.21
PSMC6-208	ENST00000554956	IGDCC3	Q8IVU1	814 aa		7.5	□□□□□ -1.21
PSMC6-208	ENST00000554956	NETO2	Q8NC67	525 aa		7.5	□□□□□ -1.21
PSMC6-208	ENST00000554956	MZB1	Q8WU39	189 aa		7.5	□□□□□ -1.21
PSMC6-208	ENST00000554956	PHF20	Q9BVI0	1012 aa		7.5	□□□□□ -1.21
PSMC6-208	ENST00000554956	OSBPL2	Q9H1P3	480 aa		7.5	□□□□□ -1.21
PSMC6-208	ENST00000554956	PCDHA5	Q9Y5H7	936 aa		7.5	□□□□□ -1.21
PSMC6-208	ENST00000554956	NPFFR2	Q9Y5X5	522 aa		7.5	□□□□□ -1.21
PSMC6-208	ENST00000554956	PTPRU	Q92729	1446 aa		7.5	□□□□□ -1.21
PSMC6-208	ENST00000554956	NWD1	Q149M9	1564 aa		7.5	□□□□□ -1.21
PSMC6-208	ENST00000554956	KDM2B	Q8NHM5	1336 aa		7.5	□□□□□ -1.21
PSMC6-208	ENST00000554956	NKTR	P30414	1462 aa	Known RBP	7.49	□□□□□ -1.21
PSMC6-208	ENST00000554956	NUP155	O75694	1391 aa		7.49	□□□□□ -1.21
PSMC6-208	ENST00000554956	ROCK1	Q13464	1354 aa		7.49	□□□□□ -1.21
PSMC6-208	ENST00000554956	N4BP3	O15049	544 aa		7.49	□□□□□ -1.21
PSMC6-208	ENST00000554956	MYO1B	O43795	1136 aa		7.49	□□□□□ -1.21
PSMC6-208	ENST00000554956	FBLN1	P23142	703 aa		7.49	□□□□□ -1.21
PSMC6-208	ENST00000554956	JAG1	P78504	1218 aa		7.49	□□□□□ -1.21
PSMC6-208	ENST00000554956	IFRD2	Q12894	506 aa	Predicted RBP	7.49	□□□□□ -1.21
PSMC6-208	ENST00000554956	FAM209A	Q5JX71	171 aa		7.49	□□□□□ -1.21
PSMC6-208	ENST00000554956	CHAMP1	Q96JM3	812 aa		7.49	□□□□□ -1.21
PSMC6-208	ENST00000554956	DRC1	Q96MC2	740 aa		7.49	□□□□□ -1.21
PSMC6-208	ENST00000554956	DNAJC7	Q99615	494 aa		7.49	□□□□□ -1.21
PSMC6-208	ENST00000554956	PPARGC1A	Q9UBK2	798 aa	Known RBP	7.49	□□□□□ -1.21
PSMC6-208	ENST00000554956	TMEM131L	A2VDJ0	1609 aa		7.49	□□□□□ -1.21
PSMC6-208	ENST00000554956	KDM5A	P29375	1690 aa	Known RBP	7.48	□□□□□ -1.21
PSMC6-208	ENST00000554956	PI3	P19957	117 aa		7.48	□□□□□ -1.21
PSMC6-208	ENST00000554956	BMS1	Q14692	1282 aa	Known RBP	7.48	□□□□□ -1.21
PSMC6-208	ENST00000554956	LCE3B	Q5TA77	95 aa		7.48	□□□□□ -1.21
PSMC6-208	ENST00000554956	SOGA3	Q5TF21	947 aa		7.48	□□□□□ -1.21
PSMC6-208	ENST00000554956		Q8N1Y9	231 aa		7.48	□□□□□ -1.21
PSMC6-208	ENST00000554956	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	7.48	□□□□□ -1.21
PSMC6-208	ENST00000554956	TRMT2B	Q96GJ1	504 aa	Known RBP	7.48	□□□□□ -1.21
PSMC6-208	ENST00000554956	TMEM169	Q96HH4	297 aa		7.48	□□□□□ -1.21
PSMC6-208	ENST00000554956	CLDND1	Q9NY35	253 aa		7.48	□□□□□ -1.21
PSMC6-208	ENST00000554956	ROBO1	Q9Y6N7	1651 aa		7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	IGSF3	O75054	1194 aa		7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	CFP	P27918	469 aa		7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	MC3R	P41968	323 aa		7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	LSAMP	Q13449	338 aa		7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	LRP10	Q7Z4F1	713 aa		7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	C1QL4	Q86Z23	238 aa		7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	LRRC56	Q8IYG6	542 aa	Predicted RBP	7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	PANK1	Q8TE04	598 aa		7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	ALG3	Q92685	438 aa		7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	MKL1	Q969V6	931 aa		7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	PEX11G	Q96HA9	241 aa		7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	EXOC2	Q96KP1	924 aa		7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	SIGLEC10	Q96LC7	697 aa		7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	CDC6	Q99741	560 aa		7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	GPR27	Q9NS67	375 aa		7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	NUDT5	Q9UKK9	219 aa		7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	CNOT6	Q9ULM6	557 aa	Known RBP	7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	IRAK3	Q9Y616	596 aa		7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956		X6R8D5	127 aa		7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	LRP6	O75581	1613 aa		7.47	□□□□□ -1.21
PSMC6-208	ENST00000554956	MET	P08581	1390 aa		7.46	□□□□□ -1.21
PSMC6-208	ENST00000554956	JCAD	Q9P266	1359 aa		7.46	□□□□□ -1.21
PSMC6-208	ENST00000554956	UNC13B	O14795	1591 aa		7.46	□□□□□ -1.21
PSMC6-208	ENST00000554956	TRBV23-1	A0A0A0MS06	115 aa		7.46	□□□□□ -1.22
PSMC6-208	ENST00000554956	IRS4	O14654	1257 aa	Predicted RBP	7.46	□□□□□ -1.22
PSMC6-208	ENST00000554956	SGSM2	O43147	1006 aa		7.46	□□□□□ -1.22
PSMC6-208	ENST00000554956	ASGR2	P07307	311 aa		7.46	□□□□□ -1.22
PSMC6-208	ENST00000554956	PML	P29590	882 aa		7.46	□□□□□ -1.22
PSMC6-208	ENST00000554956	LIMS1	P48059	325 aa		7.46	□□□□□ -1.22
PSMC6-208	ENST00000554956	GTF2A2	P52657	109 aa		7.46	□□□□□ -1.22
PSMC6-208	ENST00000554956	BRINP3	Q76B58	766 aa		7.46	□□□□□ -1.22
PSMC6-208	ENST00000554956	DCP2	Q8IU60	420 aa	Known RBP	7.46	□□□□□ -1.22
PSMC6-208	ENST00000554956	TMEFF1	Q8IYR6	380 aa		7.46	□□□□□ -1.22
PSMC6-208	ENST00000554956	DCAF4	Q8WV16	495 aa		7.46	□□□□□ -1.22
PSMC6-208	ENST00000554956	UBXN4	Q92575	508 aa		7.46	□□□□□ -1.22
PSMC6-208	ENST00000554956	DDX17	Q92841	729 aa	Known RBP	7.46	□□□□□ -1.22
PSMC6-208	ENST00000554956	TSPAN17	Q96FV3	270 aa		7.46	□□□□□ -1.22
PSMC6-208	ENST00000554956	KCTD3	Q9Y597	815 aa		7.46	□□□□□ -1.22
PSMC6-208	ENST00000554956	IRS2	Q9Y4H2	1338 aa		7.46	□□□□□ -1.22
PSMC6-208	ENST00000554956		E9PCH4	1651 aa		7.45	□□□□□ -1.22
PSMC6-208	ENST00000554956	BUB1B	O60566	1050 aa	Predicted RBP	7.45	□□□□□ -1.22
PSMC6-208	ENST00000554956	ATF2	P15336	505 aa		7.45	□□□□□ -1.22
PSMC6-208	ENST00000554956	RIOX2	Q8IUF8	465 aa		7.45	□□□□□ -1.22
PSMC6-208	ENST00000554956	TOX2	Q96NM4	488 aa		7.45	□□□□□ -1.22
PSMC6-208	ENST00000554956	LNPK	Q9C0E8	428 aa		7.45	□□□□□ -1.22
PSMC6-208	ENST00000554956	IRF2BPL	Q9H1B7	796 aa		7.45	□□□□□ -1.22
PSMC6-208	ENST00000554956	CDIP1	Q9H305	208 aa		7.45	□□□□□ -1.22
PSMC6-208	ENST00000554956	TRAF6	Q9Y4K3	522 aa		7.45	□□□□□ -1.22
PSMC6-208	ENST00000554956	NCOA3	Q9Y6Q9	1424 aa		7.44	□□□□□ -1.22
PSMC6-208	ENST00000554956		H7BY64	318 aa		7.44	□□□□□ -1.22
PSMC6-208	ENST00000554956	NUAK1	O60285	661 aa		7.44	□□□□□ -1.22
PSMC6-208	ENST00000554956	ATF3	P18847	181 aa		7.44	□□□□□ -1.22
PSMC6-208	ENST00000554956	IGFBP6	P24592	240 aa	Predicted RBP	7.44	□□□□□ -1.22
PSMC6-208	ENST00000554956	MROH9	Q5TGP6	573 aa		7.44	□□□□□ -1.22
PSMC6-208	ENST00000554956	STYK1	Q6J9G0	422 aa		7.44	□□□□□ -1.22
PSMC6-208	ENST00000554956	KRTAP1-3	Q8IUG1	177 aa		7.44	□□□□□ -1.22
PSMC6-208	ENST00000554956	LILRB2	Q8N423	598 aa		7.44	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms