RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 PBX1P40424 430 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 CYP2J2P51589 502 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 PLTPP55058 493 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 KCNQ4P56696 695 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 CORO7P57737 925 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 LACTBP83111 547 aaPredicted RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 CDC37Q16543 378 aaPredicted RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 PPP1R18Q6NYC8 613 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 VSIG1Q86XK7 387 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 PLCD3Q8N3E9 789 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 SYN2Q92777 582 aaPredicted RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 SCLT1Q96NL6 688 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 DDX47Q9H0S4 455 aaKnown RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 ACTR5Q9H9F9 607 aaPredicted RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 PARVGQ9HBI0 331 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 MTMR4Q9NYA4 1195 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 ARHGAP20Q9P2F6 1191 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 PI4KBQ9UBF8 816 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 HPCAL4Q9UM19 191 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 EXOC7Q9UPT5 735 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 CAPN6Q9Y6Q1 641 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 DUSP10Q9Y6W6 482 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 CNTRLQ7Z7A1 2325 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 PITPNM2Q9BZ72 1349 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 A0A087X0T9 212 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 LRRIQ3A6PVS8 624 aaPredicted RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 MYO1FO00160 1098 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 ZNF185O15231 689 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 MEFVO15553 781 aaPredicted RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 CHMP2AO43633 222 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 GFPT2O94808 682 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 FAM228BP0C875 321 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 SLC16A2P36021 539 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 COASYQ13057 564 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 PTPROQ16827 1216 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 KNOP1Q1ED39 458 aaKnown RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 USH1GQ495M9 461 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 KIAA0825Q8IV33 1275 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 PPM1KQ8N3J5 372 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 RAD54LQ92698 747 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 HPS3Q969F9 1004 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 SEL1LQ9UBV2 794 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 SRP68Q9UHB9 627 aaKnown RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 NOVA2Q9UNW9 492 aaKnown RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 TMEM110-MUSTN1A8MSY1 372 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 STXBP3O00186 592 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 PODXLO00592 558 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 PDXKO00764 312 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 EIF3HO15372 352 aaKnown RBP eCLIP4.24□□□□□ -1.73
KTN1-217ENST00000554831 ALDH1B1P30837 517 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 CARSP49589 748 aaKnown RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 ZBTB16Q05516 673 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 GFPT1Q06210 699 aaPredicted RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 SLC20A2Q08357 652 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 PLS1Q14651 629 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 ZNF662Q6ZS27 426 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 IRF2BP1Q8IU81 584 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 RSRC1Q96IZ7 334 aaKnown RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 FNBP1Q96RU3 617 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 COA1Q9GZY4 146 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 TYW1Q9NV66 732 aaKnown RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 GCNT4Q9P109 453 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 CEP83Q9Y592 693 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 ZNF335Q9H4Z2 1342 aaPredicted RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 ANKRD62A6NC57 917 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 USP17L5A8MUK1 530 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 USP17L15C9J2P7 530 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 USP17L13C9JLJ4 530 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 USP17L11C9JVI0 530 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 USP17L18D6R9N7 530 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 USP17L22D6RA61 530 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 USP17L17D6RBQ6 530 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 USP17L19D6RCP7 530 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 USP17L20D6RJB6 530 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 E9PMD0 336 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 EEF2P13639 858 aaKnown RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 HNRNPH3P31942 346 aaKnown RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 SLC8A1P32418 973 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 AARSP49588 968 aaKnown RBP eCLIP4.24□□□□□ -1.73
KTN1-217ENST00000554831 FXR2P51116 673 aaKnown RBP eCLIP4.24□□□□□ -1.739e-8■■■■□ 20.7
KTN1-217ENST00000554831 PDE6CP51160 858 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 CACNB1Q02641 598 aaPredicted RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 ZNF543Q08ER8 600 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 USP17L24Q0WX57 530 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 NBPF9Q3BBW0 867 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 LRCH2Q5VUJ6 765 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 TTC19Q6DKK2 380 aaPredicted RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 USP17L6PQ6QN14 398 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 GSPT2Q8IYD1 628 aaKnown RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 CCDC197Q8NCU1 140 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 BICD1Q96G01 975 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 ATP6V1G3Q96LB4 118 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 DUSP9Q99956 384 aaKnown RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 MRPL11Q9Y3B7 192 aaKnown RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 DCCP43146 1447 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 GMNCA6NCL1 334 aa4.24□□□□□ -1.73
KTN1-217ENST00000554831 PRPF6O94906 941 aaKnown RBP4.24□□□□□ -1.73
KTN1-217ENST00000554831 FGGP02679 453 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms