RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 HDAC9Q9UKV0 1011 aa13.02□□□□□ -0.32
XRCC3-208ENST00000554811 CHD4Q14839 1912 aa13.02□□□□□ -0.32
XRCC3-208ENST00000554811 TTLL1O95922 423 aa13.02□□□□□ -0.33
XRCC3-208ENST00000554811 PSMC6P62333 389 aa13.02□□□□□ -0.33
XRCC3-208ENST00000554811 RPGRIP1Q96KN7 1286 aa13.02□□□□□ -0.33
XRCC3-208ENST00000554811 SPZ1Q9BXG8 430 aa13.02□□□□□ -0.33
XRCC3-208ENST00000554811 JMJD4Q9H9V9 463 aa13.02□□□□□ -0.33
XRCC3-208ENST00000554811 XRCC5P13010 732 aaKnown RBP13.02□□□□□ -0.33
XRCC3-208ENST00000554811 ZIM3Q96PE6 472 aa13.02□□□□□ -0.33
XRCC3-208ENST00000554811 POLLQ9UGP5 575 aa13.02□□□□□ -0.33
XRCC3-208ENST00000554811 THRAP3Q9Y2W1 955 aaKnown RBP13.02□□□□□ -0.33
XRCC3-208ENST00000554811 GLI3P10071 1580 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 KRIT1O00522 736 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 FAM13AO94988 1023 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 PPFIA1Q13136 1202 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 ZNF211Q13398 564 aaPredicted RBP13.01□□□□□ -0.33
XRCC3-208ENST00000554811 PRR5LQ6MZQ0 368 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 WDR93Q6P2C0 686 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 GUF1Q8N442 669 aaKnown RBP13.01□□□□□ -0.33
XRCC3-208ENST00000554811 OTUD6BQ8N6M0 293 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 DDX4Q9NQI0 724 aaKnown RBP13.01□□□□□ -0.33
XRCC3-208ENST00000554811 TCEAL9Q9UHQ7 104 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 DNM3Q9UQ16 869 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 MYH3P11055 1940 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 PPFIA4O75335 1185 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 GTF2A1P52655 376 aaPredicted RBP13.01□□□□□ -0.33
XRCC3-208ENST00000554811 EPHB4P54760 987 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 SP4Q02446 784 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 EXOC3L4Q17RC7 722 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 QRICH1Q2TAL8 776 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 SLFN13Q68D06 897 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 CENPPQ6IPU0 288 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 VPS36Q86VN1 386 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 ERGIC2Q96RQ1 377 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 STK17AQ9UEE5 414 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 CAPN7Q9Y6W3 813 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 ADAMTSL3P82987 1691 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 SORBS3O60504 671 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 PRPHP41219 470 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 IRAK1P51617 712 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 PAK2Q13177 524 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 FBXW10Q5XX13 1052 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 C16orf86Q6ZW13 317 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 PHLDB2Q86SQ0 1253 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 CYP2W1Q8TAV3 490 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 ELMO3Q96BJ8 720 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 RBM17Q96I25 401 aaKnown RBP13.01□□□□□ -0.33
XRCC3-208ENST00000554811 TLR10Q9BXR5 811 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 MKRN1Q9UHC7 482 aaKnown RBP13.01□□□□□ -0.33
XRCC3-208ENST00000554811 CICQ96RK0 1608 aaPredicted RBP13.01□□□□□ -0.33
XRCC3-208ENST00000554811 COL4A1P02462 1669 aa13.01□□□□□ -0.33
XRCC3-208ENST00000554811 NID2Q14112 1375 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 ANO9A1A5B4 782 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 MYL1P05976 194 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 MYBP10242 640 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 INPP5BP32019 993 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 CTNNA1P35221 906 aaKnown RBP13□□□□□ -0.33
XRCC3-208ENST00000554811 CASP5P51878 434 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 TNNC1P63316 161 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 KCNA1Q09470 495 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 SEPT2Q15019 361 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 MEA1Q16626 185 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 SELENOSQ9BQE4 189 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 PCIF1Q9H4Z3 704 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 KCNQ5Q9NR82 932 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 ERLIN2O94905 339 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 FGRP09769 529 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 TRIM49P0CI25 452 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 TRIM49CP0CI26 452 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 CASP4P49662 377 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 LRRC63Q05C16 580 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 CDC37Q16543 378 aaPredicted RBP13□□□□□ -0.33
XRCC3-208ENST00000554811 HAUS3Q68CZ6 603 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 ZFPM1Q8IX07 1006 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 LRRC27Q9C0I9 530 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 GCNT4Q9P109 453 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 FAM169AQ9Y6X4 670 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 PNMA6FA0A0J9YX94 578 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 ZBTB39O15060 712 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 ALKBH5Q6P6C2 394 aaKnown RBP13□□□□□ -0.33
XRCC3-208ENST00000554811 CEP89Q96ST8 783 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 ANO3Q9BYT9 981 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 CELF4Q9BZC1 486 aaKnown RBP13□□□□□ -0.33
XRCC3-208ENST00000554811 HOMER2Q9NSB8 354 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 AMACRQ9UHK6 382 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 USP21Q9UK80 565 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 SIK3Q9Y2K2 1263 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 DUOX1Q9NRD9 1551 aa13□□□□□ -0.33
XRCC3-208ENST00000554811 TOM1O60784 492 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 SERPING1P05155 500 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 GJC1P36383 396 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 SSR1P43307 286 aaKnown RBP12.99□□□□□ -0.33
XRCC3-208ENST00000554811 PTK2Q05397 1052 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 ZC2HC1CQ53FD0 456 aaPredicted RBP12.99□□□□□ -0.33
XRCC3-208ENST00000554811 MUM1L1Q5H9M0 696 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 PLAAQ9Y263 795 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 RAD51CO43502 376 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 MED24O75448 989 aa12.99□□□□□ -0.33
XRCC3-208ENST00000554811 EEF2P13639 858 aaKnown RBP12.99□□□□□ -0.33
XRCC3-208ENST00000554811 IFT88Q13099 833 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms