RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 GPHNQ9NQX3 736 aaPredicted RBP12.5□□□□□ -0.41
SRP54-205ENST00000554803 TOMM22Q9NS69 142 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 FAM184BQ9ULE4 1060 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.5□□□□□ -0.419e-6■■■□□ 16.5
SRP54-205ENST00000554803 SLC12A7Q9Y666 1083 aa12.5□□□□□ -0.41
SRP54-205ENST00000554803 TET1Q8NFU7 2136 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 UMODL1Q5DID0 1318 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 ERICH2A1L162 156 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 GOLGA8AA7E2F4 631 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 EFCAB8A8MWE9 144 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 ORC4O43929 436 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 DUSP11O75319 330 aaKnown RBP12.49□□□□□ -0.41
SRP54-205ENST00000554803 DEXIO95424 95 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 SERPINC1P01008 464 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 H2AFXP16104 143 aaPredicted RBP12.49□□□□□ -0.41
SRP54-205ENST00000554803 ATP2A2P16615 1042 aaKnown RBP12.49□□□□□ -0.41
SRP54-205ENST00000554803 RASA1P20936 1047 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 CDK8P49336 464 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 IRX5P78411 483 aaPredicted RBP12.49□□□□□ -0.41
SRP54-205ENST00000554803 GUCY1B3Q02153 619 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 ARMCX5Q6P1M9 558 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 GJD3Q8N144 294 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 VTI1AQ96AJ9 217 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 ATG4CQ96DT6 458 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 CCDC51Q96ER9 411 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 CTAGE1Q96RT6 745 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.49□□□□□ -0.41
SRP54-205ENST00000554803 HIPK3Q9H422 1215 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 CERS4Q9HA82 394 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 KCNH3Q9ULD8 1083 aa12.49□□□□□ -0.41
SRP54-205ENST00000554803 CACNA1HO95180 2353 aa12.48□□□□□ -0.41
SRP54-205ENST00000554803 A0A1W2PRG0 241 aa12.48□□□□□ -0.41
SRP54-205ENST00000554803 RANBP6O60518 1105 aaKnown RBP12.48□□□□□ -0.41
SRP54-205ENST00000554803 CA3P07451 260 aa12.48□□□□□ -0.41
SRP54-205ENST00000554803 C6orf222P0C671 652 aaPredicted RBP12.48□□□□□ -0.41
SRP54-205ENST00000554803 ALADP13716 330 aa12.48□□□□□ -0.41
SRP54-205ENST00000554803 SHMT1P34896 483 aa12.48□□□□□ -0.41
SRP54-205ENST00000554803 KCTD2Q14681 263 aa12.48□□□□□ -0.41
SRP54-205ENST00000554803 NTRK3Q16288 839 aa12.48□□□□□ -0.41
SRP54-205ENST00000554803 TMEM67Q5HYA8 995 aa12.48□□□□□ -0.41
SRP54-205ENST00000554803 NFXL1Q6ZNB6 911 aa12.48□□□□□ -0.41
SRP54-205ENST00000554803 HOMER1Q86YM7 354 aa12.48□□□□□ -0.41
SRP54-205ENST00000554803 FAM178BQ8IXR5 827 aa12.48□□□□□ -0.41
SRP54-205ENST00000554803 RPUSD2Q8IZ73 545 aaKnown RBP12.48□□□□□ -0.41
SRP54-205ENST00000554803 FAM177A1Q8N128 213 aaPredicted RBP12.48□□□□□ -0.41
SRP54-205ENST00000554803 MSL3Q8N5Y2 521 aaKnown RBP12.48□□□□□ -0.41
SRP54-205ENST00000554803 IGDCC4Q8TDY8 1250 aa12.48□□□□□ -0.41
SRP54-205ENST00000554803 TSC1Q92574 1164 aa12.48□□□□□ -0.41
SRP54-205ENST00000554803 ZKSCAN3Q9BRR0 538 aa12.48□□□□□ -0.41
SRP54-205ENST00000554803 UPF3AQ9H1J1 476 aaKnown RBP12.48□□□□□ -0.41
SRP54-205ENST00000554803 LY9Q9HBG7 655 aa12.48□□□□□ -0.41
SRP54-205ENST00000554803 SENP2Q9HC62 589 aa12.48□□□□□ -0.41
SRP54-205ENST00000554803 ZSWIM5Q9P217 1185 aa12.48□□□□□ -0.41
SRP54-205ENST00000554803 TANC1Q9C0D5 1861 aa12.48□□□□□ -0.41
SRP54-205ENST00000554803 ZFHX2Q9C0A1 2572 aaPredicted RBP12.47□□□□□ -0.41
SRP54-205ENST00000554803 SIP14410 1827 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 ZBBXA8MT70 800 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 FLOT1O75955 427 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 MMP1P03956 469 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 CALM1P0DP23 149 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 CALM2P0DP24 149 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 CALM3P0DP25 149 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 CCL23P55773 120 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 GJA9P57773 515 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 PDE4BQ07343 736 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 TMEM132BQ14DG7 1078 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 SEPT2Q15019 361 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 SHC4Q6S5L8 630 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 SLC43A3Q8NBI5 491 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 MNS1Q8NEH6 495 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 UBXN4Q92575 508 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 VWCEQ96DN2 955 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 PANX2Q96RD6 677 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 SWAP70Q9UH65 585 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 SRPRBQ9Y5M8 271 aaKnown RBP12.47□□□□□ -0.41
SRP54-205ENST00000554803 MYH6P13533 1939 aa12.47□□□□□ -0.41
SRP54-205ENST00000554803 USP27XA6NNY8 438 aa12.46□□□□□ -0.41
SRP54-205ENST00000554803 KIF28PB7ZC32 967 aa12.46□□□□□ -0.41
SRP54-205ENST00000554803 NMT2O60551 498 aa12.46□□□□□ -0.41
SRP54-205ENST00000554803 SNAI1O95863 264 aaPredicted RBP12.46□□□□□ -0.41
SRP54-205ENST00000554803 AKR1B1P15121 316 aa12.46□□□□□ -0.41
SRP54-205ENST00000554803 TBX2Q13207 712 aaPredicted RBP12.46□□□□□ -0.41
SRP54-205ENST00000554803 GRB10Q13322 594 aa12.46□□□□□ -0.41
SRP54-205ENST00000554803 KIAA1755Q5JYT7 1200 aa12.46□□□□□ -0.41
SRP54-205ENST00000554803 SPECC1LQ69YQ0 1117 aa12.46□□□□□ -0.41
SRP54-205ENST00000554803 RIOX2Q8IUF8 465 aa12.46□□□□□ -0.41
SRP54-205ENST00000554803 GPR161Q8N6U8 529 aaKnown RBP12.46□□□□□ -0.41
SRP54-205ENST00000554803 SPATA20Q8TB22 786 aa12.46□□□□□ -0.41
SRP54-205ENST00000554803 ARNTL2Q8WYA1 636 aa12.46□□□□□ -0.41
SRP54-205ENST00000554803 ESR2Q92731 530 aa12.46□□□□□ -0.41
SRP54-205ENST00000554803 SMARCE1Q969G3 411 aa12.46□□□□□ -0.41
SRP54-205ENST00000554803 NOC4LQ9BVI4 516 aaKnown RBP12.46□□□□□ -0.41
SRP54-205ENST00000554803 RNF26Q9BY78 433 aaPredicted RBP12.46□□□□□ -0.41
SRP54-205ENST00000554803 WNT8AQ9H1J5 351 aa12.46□□□□□ -0.41
SRP54-205ENST00000554803 MKNK2Q9HBH9 465 aa12.46□□□□□ -0.41
SRP54-205ENST00000554803 SPC25Q9HBM1 224 aa12.46□□□□□ -0.41
SRP54-205ENST00000554803 RBM28Q9NW13 759 aaKnown RBP12.46□□□□□ -0.41
SRP54-205ENST00000554803 ZHX1Q9UKY1 873 aaPredicted RBP12.46□□□□□ -0.41
SRP54-205ENST00000554803 V9GYY5 206 aaPredicted RBP12.46□□□□□ -0.41
SRP54-205ENST00000554803 TRIP12Q14669 1992 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms