RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 UTP14CQ5TAP6 766 aaKnown RBP12.16□□□□□ -0.46
SHMT2-215ENST00000554656 MYOCDQ8IZQ8 938 aa12.16□□□□□ -0.46
SHMT2-215ENST00000554656 CTCFLQ8NI51 663 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-215ENST00000554656 SMARCC2Q8TAQ2 1214 aa12.16□□□□□ -0.46
SHMT2-215ENST00000554656 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-215ENST00000554656 IPO9Q96P70 1041 aaKnown RBP12.16□□□□□ -0.46
SHMT2-215ENST00000554656 TGS1Q96RS0 853 aaKnown RBP12.16□□□□□ -0.46
SHMT2-215ENST00000554656 C17orf80Q9BSJ5 609 aa12.16□□□□□ -0.46
SHMT2-215ENST00000554656 MTA3Q9BTC8 594 aa12.16□□□□□ -0.46
SHMT2-215ENST00000554656 USP26Q9BXU7 913 aa12.16□□□□□ -0.46
SHMT2-215ENST00000554656 LRRC2Q9BYS8 371 aa12.16□□□□□ -0.46
SHMT2-215ENST00000554656 KIAA1671Q9BY89 1806 aa12.16□□□□□ -0.46
SHMT2-215ENST00000554656 ITGB5P18084 799 aa12.15□□□□□ -0.46
SHMT2-215ENST00000554656 COL9A1P20849 921 aa12.15□□□□□ -0.46
SHMT2-215ENST00000554656 SMARCA1P28370 1054 aa12.15□□□□□ -0.46
SHMT2-215ENST00000554656 KIF5BP33176 963 aa12.15□□□□□ -0.46
SHMT2-215ENST00000554656 MCM5P33992 734 aa12.15□□□□□ -0.46
SHMT2-215ENST00000554656 NECTIN1Q15223 517 aa12.15□□□□□ -0.46
SHMT2-215ENST00000554656 AAK1Q2M2I8 961 aa12.15□□□□□ -0.46
SHMT2-215ENST00000554656 CREB3L3Q68CJ9 461 aa12.15□□□□□ -0.46
SHMT2-215ENST00000554656 RUFY4Q6ZNE9 571 aa12.15□□□□□ -0.46
SHMT2-215ENST00000554656 SENP7Q9BQF6 1050 aa12.15□□□□□ -0.46
SHMT2-215ENST00000554656 COG5Q9UP83 839 aa12.15□□□□□ -0.46
SHMT2-215ENST00000554656 GSTTP1A0A1W2PQM5 241 aa12.14□□□□□ -0.47
SHMT2-215ENST00000554656 CAND2O75155 1236 aa12.14□□□□□ -0.47
SHMT2-215ENST00000554656 LIFRP42702 1097 aa12.14□□□□□ -0.47
SHMT2-215ENST00000554656 ARHGAP4P98171 946 aa12.14□□□□□ -0.47
SHMT2-215ENST00000554656 FAM26DQ5JW98 314 aa12.14□□□□□ -0.47
SHMT2-215ENST00000554656 XRRA1Q6P2D8 792 aa12.14□□□□□ -0.47
SHMT2-215ENST00000554656 NFXL1Q6ZNB6 911 aa12.14□□□□□ -0.47
SHMT2-215ENST00000554656 TMTC3Q6ZXV5 915 aa12.14□□□□□ -0.47
SHMT2-215ENST00000554656 KHSRPQ92945 711 aaKnown RBP eCLIP12.14□□□□□ -0.47
SHMT2-215ENST00000554656 CUL5Q93034 780 aa12.14□□□□□ -0.47
SHMT2-215ENST00000554656 HLA-CQ95604 372 aa12.14□□□□□ -0.47
SHMT2-215ENST00000554656 GPRASP2Q96D09 838 aa12.14□□□□□ -0.47
SHMT2-215ENST00000554656 TMEM87BQ96K49 555 aa12.14□□□□□ -0.47
SHMT2-215ENST00000554656 LZTS2Q9BRK4 669 aa12.14□□□□□ -0.47
SHMT2-215ENST00000554656 LMCD1Q9NZU5 365 aa12.14□□□□□ -0.47
SHMT2-215ENST00000554656 SEC63Q9UGP8 760 aaKnown RBP12.14□□□□□ -0.47
SHMT2-215ENST00000554656 INSL6Q9Y581 213 aa12.14□□□□□ -0.47
SHMT2-215ENST00000554656 UBIAD1Q9Y5Z9 338 aa12.14□□□□□ -0.47
SHMT2-215ENST00000554656 TTC3P53804 2025 aa12.14□□□□□ -0.47
SHMT2-215ENST00000554656 CNTNAP5Q8WYK1 1306 aa12.13□□□□□ -0.47
SHMT2-215ENST00000554656 CCDC69A6NI79 296 aa12.13□□□□□ -0.47
SHMT2-215ENST00000554656 CHRNA1P02708 482 aa12.13□□□□□ -0.47
SHMT2-215ENST00000554656 AMHP03971 560 aa12.13□□□□□ -0.47
SHMT2-215ENST00000554656 TCF7P36402 384 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-215ENST00000554656 GNAQP50148 359 aa12.13□□□□□ -0.47
SHMT2-215ENST00000554656 ANAPC15P60006 121 aa12.13□□□□□ -0.47
SHMT2-215ENST00000554656 MGAT3Q09327 533 aa12.13□□□□□ -0.47
SHMT2-215ENST00000554656 TYW1BQ6NUM6 668 aa12.13□□□□□ -0.47
SHMT2-215ENST00000554656 CCDC82Q8N4S0 544 aa12.13□□□□□ -0.47
SHMT2-215ENST00000554656 FBXO22Q8NEZ5 403 aa12.13□□□□□ -0.47
SHMT2-215ENST00000554656 SEPT8Q92599 483 aa12.13□□□□□ -0.47
SHMT2-215ENST00000554656 TOP1MTQ969P6 601 aa12.13□□□□□ -0.47
SHMT2-215ENST00000554656 ZBTB10Q96DT7 871 aa12.13□□□□□ -0.47
SHMT2-215ENST00000554656 IL17RAQ96F46 866 aa12.13□□□□□ -0.47
SHMT2-215ENST00000554656 PSTPIP2Q9H939 334 aa12.13□□□□□ -0.47
SHMT2-215ENST00000554656 PKD2L1Q9P0L9 805 aa12.13□□□□□ -0.47
SHMT2-215ENST00000554656 ZNF215Q9UL58 517 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-215ENST00000554656 WDR81Q562E7 1941 aa12.12□□□□□ -0.47
SHMT2-215ENST00000554656 LINC00271P0C7V0 271 aa12.12□□□□□ -0.47
SHMT2-215ENST00000554656 MARK3P27448 753 aa12.12□□□□□ -0.47
SHMT2-215ENST00000554656 FUT2Q10981 343 aa12.12□□□□□ -0.47
SHMT2-215ENST00000554656 BECN1Q14457 450 aa12.12□□□□□ -0.47
SHMT2-215ENST00000554656 EPC2Q52LR7 807 aa12.12□□□□□ -0.47
SHMT2-215ENST00000554656 MARCH8Q5T0T0 291 aa12.12□□□□□ -0.47
SHMT2-215ENST00000554656 WWC2Q6AWC2 1192 aa12.12□□□□□ -0.47
SHMT2-215ENST00000554656 NLRX1Q86UT6 975 aa12.12□□□□□ -0.47
SHMT2-215ENST00000554656 SGMS1Q86VZ5 419 aa12.12□□□□□ -0.47
SHMT2-215ENST00000554656 MICU3Q86XE3 530 aa12.12□□□□□ -0.47
SHMT2-215ENST00000554656 TMTC2Q8N394 836 aa12.12□□□□□ -0.47
SHMT2-215ENST00000554656 FANCBQ8NB91 859 aa12.12□□□□□ -0.47
SHMT2-215ENST00000554656 TCEANC2Q96MN5 208 aa12.12□□□□□ -0.47
SHMT2-215ENST00000554656 PCYT2Q99447 389 aa12.12□□□□□ -0.47
SHMT2-215ENST00000554656 IFIH1Q9BYX4 1025 aaKnown RBP12.12□□□□□ -0.47
SHMT2-215ENST00000554656 UBE2ZQ9H832 354 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-215ENST00000554656 EHMT1Q9H9B1 1298 aa12.12□□□□□ -0.47
SHMT2-215ENST00000554656 CD320Q9NPF0 282 aa12.12□□□□□ -0.47
SHMT2-215ENST00000554656 ANO2Q9NQ90 1003 aa12.12□□□□□ -0.47
SHMT2-215ENST00000554656 NRCAMQ92823 1304 aa12.11□□□□□ -0.47
SHMT2-215ENST00000554656 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-215ENST00000554656 MBLAC1A4D2B0 266 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-215ENST00000554656 UPP2O95045 317 aa12.11□□□□□ -0.47
SHMT2-215ENST00000554656 CALM1P0DP23 149 aa12.11□□□□□ -0.47
SHMT2-215ENST00000554656 CALM2P0DP24 149 aa12.11□□□□□ -0.47
SHMT2-215ENST00000554656 CALM3P0DP25 149 aa12.11□□□□□ -0.47
SHMT2-215ENST00000554656 GHRP10912 638 aa12.11□□□□□ -0.47
SHMT2-215ENST00000554656 GNAT1P11488 350 aa12.11□□□□□ -0.47
SHMT2-215ENST00000554656 PPFIA1Q13136 1202 aa12.11□□□□□ -0.47
SHMT2-215ENST00000554656 LPIN1Q14693 890 aa12.11□□□□□ -0.47
SHMT2-215ENST00000554656 GRIK4Q16099 956 aa12.11□□□□□ -0.47
SHMT2-215ENST00000554656 APOA5Q6Q788 366 aa12.11□□□□□ -0.47
SHMT2-215ENST00000554656 HEATR3Q7Z4Q2 680 aa12.11□□□□□ -0.47
SHMT2-215ENST00000554656 RPAINQ86UA6 219 aa12.11□□□□□ -0.47
SHMT2-215ENST00000554656 CYP2W1Q8TAV3 490 aa12.11□□□□□ -0.47
SHMT2-215ENST00000554656 MRPL38Q96DV4 380 aaKnown RBP12.11□□□□□ -0.47
SHMT2-215ENST00000554656 PGBD1Q96JS3 809 aa12.11□□□□□ -0.47
SHMT2-215ENST00000554656 EPHX3Q9H6B9 360 aa12.11□□□□□ -0.47
SHMT2-215ENST00000554656 RC3H2Q9HBD1 1191 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms