RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 CKAP2LQ8IYA6 745 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 TRIML1Q8N9V2 468 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 RAD54LQ92698 747 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 PAGE5Q96GU1 130 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 ZFP91Q96JP5 570 aaPredicted RBP8.57□□□□□ -1.04
TDP1-209ENST00000554180 PNMA5Q96PV4 448 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 TINF2Q9BSI4 451 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 PANK2Q9BZ23 570 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 ABHD16BQ9H3Z7 469 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 SLC9A2Q9UBY0 812 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 RBM47A0AV96 593 aaKnown RBP8.56□□□□□ -1.04
TDP1-209ENST00000554180 POTEB3A0JP26 581 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 DDX39AO00148 427 aaKnown RBP8.56□□□□□ -1.04
TDP1-209ENST00000554180 CHMP2AO43633 222 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 DKC1O60832 514 aaKnown RBP eCLIP8.56□□□□□ -1.04
TDP1-209ENST00000554180 MED24O75448 989 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 FARP2O94887 1054 aaPredicted RBP8.56□□□□□ -1.04
TDP1-209ENST00000554180 CCNE2O96020 404 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 GNRH1P01148 92 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 XRCC5P13010 732 aaKnown RBP8.56□□□□□ -1.04
TDP1-209ENST00000554180 SP3Q02447 781 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 DPYDQ12882 1025 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 KIF22Q14807 665 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 STX1AQ16623 288 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 CCDC62Q6P9F0 684 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 POTEBQ6S5H4 581 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 SASS6Q6UVJ0 657 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 METTL7BQ6UX53 244 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 SV2BQ7L1I2 683 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 FBXO16Q8IX29 292 aaPredicted RBP8.56□□□□□ -1.04
TDP1-209ENST00000554180 GSDMAQ96QA5 445 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 UIMC1Q96RL1 719 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 LXNQ9BS40 222 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 FUCA2Q9BTY2 467 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 GTPBP4Q9BZE4 634 aaKnown RBP8.56□□□□□ -1.04
TDP1-209ENST00000554180 KATNBL1Q9H079 304 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 ZSWIM4Q9H7M6 989 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 BLOC1S4Q9NUP1 217 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 RNF186Q9NXI6 227 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.56□□□□□ -1.04
TDP1-209ENST00000554180 PKD2L1Q9P0L9 805 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 NRBP1Q9UHY1 535 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 DDX41Q9UJV9 622 aaKnown RBP8.56□□□□□ -1.04
TDP1-209ENST00000554180 GJD2Q9UKL4 321 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 KIAA1024Q9UPX6 916 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 DNM3Q9UQ16 869 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 PCDHA10Q9Y5I2 948 aa8.56□□□□□ -1.04
TDP1-209ENST00000554180 POTEFA5A3E0 1075 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 NKRFO15226 690 aaKnown RBP eCLIP8.55□□□□□ -1.04
TDP1-209ENST00000554180 SLITRK3O94933 977 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 ATG7O95352 703 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 EYA4O95677 639 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 SNAI1O95863 264 aaPredicted RBP8.55□□□□□ -1.04
TDP1-209ENST00000554180 IGHA2P01877 340 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 PSAPP07602 524 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 XRCC6P12956 609 aaKnown RBP eCLIP8.55□□□□□ -1.04
TDP1-209ENST00000554180 AFMP43652 599 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 PSMC4P43686 418 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 QARSP47897 775 aaKnown RBP8.55□□□□□ -1.04
TDP1-209ENST00000554180 SARSP49591 514 aaKnown RBP8.55□□□□□ -1.04
TDP1-209ENST00000554180 ACTR2P61160 394 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 PSMC5P62195 406 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 SP2Q02086 613 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 CYP4A11Q02928 519 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 TYRO3Q06418 890 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 PNOCQ13519 176 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 GSE1Q14687 1217 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 ECM1Q16610 540 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 MIS18BP1Q6P0N0 1132 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 POTEGQ6S5H5 508 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 CYFIP1Q7L576 1253 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 EEPD1Q7L9B9 569 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 C4orf19Q8IY42 314 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 TRMT44Q8IYL2 757 aaKnown RBP8.55□□□□□ -1.04
TDP1-209ENST00000554180 NPLOC4Q8TAT6 608 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 LRRC15Q8TF66 581 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 ATP6V0A1Q93050 837 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 SMARCE1Q969G3 411 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 EMID1Q96A84 441 aaPredicted RBP8.55□□□□□ -1.04
TDP1-209ENST00000554180 DYDC2Q96IM9 177 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 TRIM47Q96LD4 638 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 NACC1Q96RE7 527 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 MTRQ99707 1265 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 C7orf25Q9BPX7 421 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 TRIM9Q9C026 710 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 TSPY26PQ9H489 355 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 BMP2KQ9NSY1 1161 aaPredicted RBP8.55□□□□□ -1.04
TDP1-209ENST00000554180 ANO10Q9NW15 660 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 RMND1Q9NWS8 449 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 RGL1Q9NZL6 768 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 KCND2Q9NZV8 630 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 SAMM50Q9Y512 469 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 PCDHA5Q9Y5H7 936 aa8.55□□□□□ -1.04
TDP1-209ENST00000554180 IGSF9BQ9UPX0 1349 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 IGKV6D-21A0A0A0MT36 114 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 PVALEFA0A1B0GWK0 134 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 FOXN1O15353 648 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 TRPA1O75762 1119 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 ARIH2O95376 493 aa8.54□□□□□ -1.04
TDP1-209ENST00000554180 GGPS1O95749 300 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms