RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 C17orf102A2RUQ5 167 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 CTDNEP1O95476 244 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 PFKMP08237 780 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 HOXC8P31273 242 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 SMAD3P84022 425 aaKnown RBP11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 PTK7Q13308 1070 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 ITGB3BPQ13352 177 aaPredicted RBP11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 GALNT17Q6IS24 598 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 OTOP2Q7RTS6 562 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 NECAB1Q8N987 351 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 AFAP1L1Q8TED9 768 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 DHX38Q92620 1227 aaKnown RBP11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 GLG1Q92896 1179 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 GTF3C6Q969F1 213 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 VWCEQ96DN2 955 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 ERAP1Q9NZ08 941 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 STK36Q9NRP7 1315 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 EYSQ5T1H1 3165 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 IPO5O00410 1097 aaKnown RBP11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 LARGE1O95461 756 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 GNAT1P11488 350 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 CKBP12277 381 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 SELPP16109 830 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 XBP1P17861 261 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 CIITAP33076 1130 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 RFC2P35250 354 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 USP11P51784 963 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 SETQ01105 290 aaPredicted RBP11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 RBL2Q08999 1139 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 RASIP1Q5U651 963 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 DEFB128Q7Z7B8 93 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 SERINC5Q86VE9 423 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 BLIDQ8IZY5 108 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 HERVK_113Q902F9 699 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 ATP6V0A1Q93050 837 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 C22orf23Q9BZE7 217 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 MTIF3Q9H2K0 278 aaKnown RBP11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 SMARCAD1Q9H4L7 1026 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 SETD4Q9NVD3 440 aa11.61□□□□□ -0.55
HNRNPC-208ENST00000553753 M0R2N6 131 aa11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 TREHO43280 583 aa11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 DTNBO60941 627 aa11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 ACTR2P61160 394 aa11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 NPY5RQ15761 445 aa11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 PRR16Q569H4 304 aa11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 LRRC8DQ7L1W4 858 aa11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 DEFB123Q8N688 67 aa11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 DAGLBQ8NCG7 672 aa11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 TBCKQ8TEA7 893 aa11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 WASF1Q92558 559 aa11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 ZNF577Q9BSK1 485 aa11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 PHF20Q9BVI0 1012 aa11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 AZI2Q9H6S1 392 aa11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 TBC1D22BQ9NU19 505 aa11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 CXXC1Q9P0U4 656 aaPredicted RBP11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 ORC3Q9UBD5 711 aaPredicted RBP11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 KCNJ14Q9UNX9 436 aa11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 EMSYQ7Z589 1322 aa11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 NRCAMQ92823 1304 aa11.6□□□□□ -0.55
HNRNPC-208ENST00000553753 DHX15O43143 795 aaKnown RBP11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 LGR5O75473 907 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 ATG7O95352 703 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 PARNO95453 639 aaKnown RBP11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 MARK3P27448 753 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 ADAM17P78536 824 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 TRIM71Q2Q1W2 868 aaKnown RBP11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 FAM109BQ6ICB4 259 aaPredicted RBP11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 Q7L0L9 218 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 WNT8BQ93098 351 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 KIF2CQ99661 725 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 LIMCH1Q9UPQ0 1083 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 SCN5AQ14524 2016 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 KAT6AQ92794 2004 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 DDX39AO00148 427 aaKnown RBP11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 EDIL3O43854 480 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 CCNE2O96020 404 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 FDPSP14324 419 aaKnown RBP11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 THPOP40225 353 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 RBM25P49756 843 aaKnown RBP11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 STAT5BP51692 787 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 ZNF618Q5T7W0 954 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 PLPPR4Q7Z2D5 763 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 LMBR1Q8WVP7 490 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 TNPO1Q92973 898 aaKnown RBP11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 LENG9Q96B70 501 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 UIMC1Q96RL1 719 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 PCYT2Q99447 389 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 FTOQ9C0B1 505 aaKnown RBP eCLIP11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 GJB4Q9NTQ9 266 aa11.59□□□□□ -0.55
HNRNPC-208ENST00000553753 TET1Q8NFU7 2136 aa11.58□□□□□ -0.56
HNRNPC-208ENST00000553753 ACTN1P12814 892 aa11.58□□□□□ -0.56
HNRNPC-208ENST00000553753 PPFIA1Q13136 1202 aa11.58□□□□□ -0.56
HNRNPC-208ENST00000553753 GPNMBQ14956 572 aa11.58□□□□□ -0.56
HNRNPC-208ENST00000553753 NONOQ15233 471 aaKnown RBP eCLIP11.58□□□□□ -0.568e-7■□□□□ 9.3
HNRNPC-208ENST00000553753 ABHD15Q6UXT9 468 aa11.58□□□□□ -0.56
HNRNPC-208ENST00000553753 NSUN7Q8NE18 718 aaKnown RBP11.58□□□□□ -0.56
HNRNPC-208ENST00000553753 SLC4A7Q9Y6M7 1214 aa11.58□□□□□ -0.56
HNRNPC-208ENST00000553753 TANC1Q9C0D5 1861 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms