RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 KLHL6Q8WZ60 621 aa6.01□□□□□ -1.45
ATXN3-220ENST00000553491 CCDC120Q96HB5 630 aa6.01□□□□□ -1.45
ATXN3-220ENST00000553491 KIRREL1Q96J84 757 aa6.01□□□□□ -1.45
ATXN3-220ENST00000553491 ZNF512BQ96KM6 892 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-220ENST00000553491 SLC6A18Q96N87 628 aa6.01□□□□□ -1.45
ATXN3-220ENST00000553491 SRP68Q9UHB9 627 aaKnown RBP6.01□□□□□ -1.45
ATXN3-220ENST00000553491 C4AP0C0L4 1744 aa6.01□□□□□ -1.45
ATXN3-220ENST00000553491 ZNF831Q5JPB2 1677 aa6.01□□□□□ -1.45
ATXN3-220ENST00000553491 ADAMTS7Q9UKP4 1686 aa6.01□□□□□ -1.45
ATXN3-220ENST00000553491 A0A087WZG4 1122 aa6□□□□□ -1.45
ATXN3-220ENST00000553491 TLDC2A0PJX2 215 aa6□□□□□ -1.45
ATXN3-220ENST00000553491 PDPK1O15530 556 aa6□□□□□ -1.45
ATXN3-220ENST00000553491 CLEC3AO75596 197 aa6□□□□□ -1.45
ATXN3-220ENST00000553491 GLI1P08151 1106 aa6□□□□□ -1.45
ATXN3-220ENST00000553491 AIMP1Q12904 312 aaKnown RBP6□□□□□ -1.45
ATXN3-220ENST00000553491 VHLLQ6RSH7 139 aa6□□□□□ -1.45
ATXN3-220ENST00000553491 JAZF1Q86VZ6 243 aa6□□□□□ -1.45
ATXN3-220ENST00000553491 PPFIBP1Q86W92 1011 aa6□□□□□ -1.45
ATXN3-220ENST00000553491 AMIGO3Q86WK7 504 aa6□□□□□ -1.45
ATXN3-220ENST00000553491 DAGLBQ8NCG7 672 aa6□□□□□ -1.45
ATXN3-220ENST00000553491 LINC01599Q8WXQ3 324 aa6□□□□□ -1.45
ATXN3-220ENST00000553491 LIN37Q96GY3 246 aaPredicted RBP6□□□□□ -1.45
ATXN3-220ENST00000553491 G6PC3Q9BUM1 346 aa6□□□□□ -1.45
ATXN3-220ENST00000553491 PRDM14Q9GZV8 571 aa6□□□□□ -1.45
ATXN3-220ENST00000553491 SUCOQ9UBS9 1254 aaKnown RBP6□□□□□ -1.45
ATXN3-220ENST00000553491 PLEKHG2Q9H7P9 1386 aa6□□□□□ -1.45
ATXN3-220ENST00000553491 HEG1Q9ULI3 1381 aa6□□□□□ -1.45
ATXN3-220ENST00000553491 LAMB4A4D0S4 1761 aa5.99□□□□□ -1.45
ATXN3-220ENST00000553491 C9IYK1 514 aa5.99□□□□□ -1.45
ATXN3-220ENST00000553491 C8AP07357 584 aa5.99□□□□□ -1.45
ATXN3-220ENST00000553491 HK2P52789 917 aa5.99□□□□□ -1.45
ATXN3-220ENST00000553491 PMS1P54277 932 aaKnown RBP5.99□□□□□ -1.45
ATXN3-220ENST00000553491 EIF4A1P60842 406 aaKnown RBP5.99□□□□□ -1.45
ATXN3-220ENST00000553491 GNAI1P63096 354 aa5.99□□□□□ -1.45
ATXN3-220ENST00000553491 SLC7A5Q01650 507 aa5.99□□□□□ -1.45
ATXN3-220ENST00000553491 CALD1Q05682 793 aaKnown RBP5.99□□□□□ -1.45
ATXN3-220ENST00000553491 RASGRF1Q13972 1273 aa5.99□□□□□ -1.45
ATXN3-220ENST00000553491 NCAPHQ15003 741 aa5.99□□□□□ -1.45
ATXN3-220ENST00000553491 GPR162Q16538 588 aa5.99□□□□□ -1.45
ATXN3-220ENST00000553491 GNPTABQ3T906 1256 aa5.99□□□□□ -1.45
ATXN3-220ENST00000553491 KIAA1211LQ6NV74 962 aa5.99□□□□□ -1.45
ATXN3-220ENST00000553491 FAM177A1Q8N128 213 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-220ENST00000553491 NLGN1Q8N2Q7 840 aa5.99□□□□□ -1.45
ATXN3-220ENST00000553491 TCTN2Q96GX1 697 aa5.99□□□□□ -1.45
ATXN3-220ENST00000553491 DHRS1Q96LJ7 313 aa5.99□□□□□ -1.45
ATXN3-220ENST00000553491 ZBTB1Q9Y2K1 713 aa5.99□□□□□ -1.45
ATXN3-220ENST00000553491 LRP5O75197 1615 aa5.99□□□□□ -1.45
ATXN3-220ENST00000553491 KCPQ6ZWJ8 1503 aa5.99□□□□□ -1.45
ATXN3-220ENST00000553491 CEMIPQ8WUJ3 1361 aa5.98□□□□□ -1.45
ATXN3-220ENST00000553491 TMEM82A0PJX8 343 aa5.98□□□□□ -1.45
ATXN3-220ENST00000553491 NOTOA8MTQ0 251 aa5.98□□□□□ -1.45
ATXN3-220ENST00000553491 TCERG1O14776 1098 aaKnown RBP5.98□□□□□ -1.45
ATXN3-220ENST00000553491 SHOXO15266 292 aa5.98□□□□□ -1.45
ATXN3-220ENST00000553491 PRAMEF1O95521 474 aa5.98□□□□□ -1.45
ATXN3-220ENST00000553491 ANXA1P04083 346 aa5.98□□□□□ -1.45
ATXN3-220ENST00000553491 MMP10P09238 476 aa5.98□□□□□ -1.45
ATXN3-220ENST00000553491 NR0B2Q15466 257 aa5.98□□□□□ -1.45
ATXN3-220ENST00000553491 KRT24Q2M2I5 525 aa5.98□□□□□ -1.45
ATXN3-220ENST00000553491 TIGD5Q53EQ6 642 aa5.98□□□□□ -1.45
ATXN3-220ENST00000553491 TMEM67Q5HYA8 995 aa5.98□□□□□ -1.45
ATXN3-220ENST00000553491 ZNF648Q5T619 568 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-220ENST00000553491 LCE1DQ5T752 114 aa5.98□□□□□ -1.45
ATXN3-220ENST00000553491 TDRD10Q5VZ19 366 aaKnown RBP5.98□□□□□ -1.45
ATXN3-220ENST00000553491 ZNF655Q8N720 491 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-220ENST00000553491 PDZD8Q8NEN9 1154 aa5.98□□□□□ -1.45
ATXN3-220ENST00000553491 DNAJC7Q99615 494 aa5.98□□□□□ -1.45
ATXN3-220ENST00000553491 SYT17Q9BSW7 474 aa5.98□□□□□ -1.45
ATXN3-220ENST00000553491 FAM86C1Q9NVL1 165 aa5.98□□□□□ -1.45
ATXN3-220ENST00000553491 FAM53CQ9NYF3 392 aa5.98□□□□□ -1.45
ATXN3-220ENST00000553491 MINPP1Q9UNW1 487 aa5.98□□□□□ -1.45
ATXN3-220ENST00000553491 MRPL42Q9Y6G3 142 aaKnown RBP5.98□□□□□ -1.45
ATXN3-220ENST00000553491 MRC1P22897 1456 aa5.97□□□□□ -1.45
ATXN3-220ENST00000553491 TAF1P21675 1872 aa5.97□□□□□ -1.45
ATXN3-220ENST00000553491 LRRC10BA6NIK2 292 aa5.97□□□□□ -1.45
ATXN3-220ENST00000553491 SIGLEC6O43699 453 aa5.97□□□□□ -1.45
ATXN3-220ENST00000553491 EFEMP2O95967 443 aa5.97□□□□□ -1.45
ATXN3-220ENST00000553491 TP53P04637 393 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-220ENST00000553491 GYS1P13807 737 aa5.97□□□□□ -1.45
ATXN3-220ENST00000553491 YBX3P16989 372 aaKnown RBP eCLIP5.97□□□□□ -1.45
ATXN3-220ENST00000553491 TRHRP34981 398 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-220ENST00000553491 CTSKP43235 329 aa5.97□□□□□ -1.45
ATXN3-220ENST00000553491 CLEC16AQ2KHT3 1053 aa5.97□□□□□ -1.45
ATXN3-220ENST00000553491 BBS9Q3SYG4 887 aa5.97□□□□□ -1.45
ATXN3-220ENST00000553491 KIF6Q6ZMV9 814 aa5.97□□□□□ -1.45
ATXN3-220ENST00000553491 RNF111Q6ZNA4 994 aa5.97□□□□□ -1.45
ATXN3-220ENST00000553491 PRR23BQ6ZRT6 265 aa5.97□□□□□ -1.45
ATXN3-220ENST00000553491 LILRB2Q8N423 598 aa5.97□□□□□ -1.45
ATXN3-220ENST00000553491 ABHD4Q8TB40 342 aa5.97□□□□□ -1.45
ATXN3-220ENST00000553491 MYLIPQ8WY64 445 aa5.97□□□□□ -1.45
ATXN3-220ENST00000553491 TSR2Q969E8 191 aaKnown RBP5.97□□□□□ -1.45
ATXN3-220ENST00000553491 NARFQ9UHQ1 456 aa5.97□□□□□ -1.45
ATXN3-220ENST00000553491 TMA7Q9Y2S6 64 aaKnown RBP5.97□□□□□ -1.45
ATXN3-220ENST00000553491 SOS1Q07889 1333 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-220ENST00000553491 COL24A1Q17RW2 1714 aa5.96□□□□□ -1.45
ATXN3-220ENST00000553491 COL15A1P39059 1388 aa5.96□□□□□ -1.45
ATXN3-220ENST00000553491 A0A0G2JLW4 131 aa5.96□□□□□ -1.46
ATXN3-220ENST00000553491 CHL1O00533 1208 aa5.96□□□□□ -1.46
ATXN3-220ENST00000553491 FARP2O94887 1054 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-220ENST00000553491 SERPINB2P05120 415 aa5.96□□□□□ -1.46
ATXN3-220ENST00000553491 IL6STP40189 918 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms