RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 TMEM240Q5SV17 173 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 C9orf50Q5SZB4 431 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 SERINC5Q86VE9 423 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 NSUN7Q8NE18 718 aaKnown RBP9.41□□□□□ -0.9
PCNX1-204ENST00000553428 RASGRP4Q8TDF6 673 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 RNPC3Q96LT9 517 aaKnown RBP9.41□□□□□ -0.9
PCNX1-204ENST00000553428 CTAGE1Q96RT6 745 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 KIF2CQ99661 725 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 NAP1L4Q99733 375 aaKnown RBP9.41□□□□□ -0.9
PCNX1-204ENST00000553428 LLPHQ9BRT6 129 aaKnown RBP9.41□□□□□ -0.9
PCNX1-204ENST00000553428 ZNF577Q9BSK1 485 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 WNT8AQ9H1J5 351 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 AZI2Q9H6S1 392 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 BRMS1Q9HCU9 246 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 ERAP1Q9NZ08 941 aa9.41□□□□□ -0.9
PCNX1-204ENST00000553428 UMODL1Q5DID0 1318 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 TRIOBPQ9H2D6 2365 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 CYP3A7-CYP3A51PA0A087WV96 503 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 CCDC194A0A1B0GVG4 234 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 IPO5O00410 1097 aaKnown RBP9.4□□□□□ -0.9
PCNX1-204ENST00000553428 ADAMTS3O15072 1205 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 ST18O60284 1047 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 LARGE1O95461 756 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 RPLP2P05387 115 aaKnown RBP9.4□□□□□ -0.9
PCNX1-204ENST00000553428 IQCF3P0C7M6 154 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 SMIM10L2AP0DMW4 78 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 SMIM10L2BP0DMW5 78 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 SELPP16109 830 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 GCFC2P16383 781 aaKnown RBP9.4□□□□□ -0.9
PCNX1-204ENST00000553428 CYP3A7P24462 503 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 EPHB4P54760 987 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 CCL23P55773 120 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 ACTR2P61160 394 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 KRT76Q01546 638 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 ITGB3BPQ13352 177 aaPredicted RBP9.4□□□□□ -0.9
PCNX1-204ENST00000553428 Q4G0T1 1027 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 PRR16Q569H4 304 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 UTP14CQ5TAP6 766 aaKnown RBP9.4□□□□□ -0.9
PCNX1-204ENST00000553428 RASIP1Q5U651 963 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 FAM109BQ6ICB4 259 aaPredicted RBP9.4□□□□□ -0.9
PCNX1-204ENST00000553428 ZNF746Q6NUN9 644 aaPredicted RBP9.4□□□□□ -0.9
PCNX1-204ENST00000553428 PLPPR4Q7Z2D5 763 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 NECAB1Q8N987 351 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 TBCKQ8TEA7 893 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 HERVK_113Q902F9 699 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 GLG1Q92896 1179 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 ATP6V0A1Q93050 837 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 AIFM3Q96NN9 605 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 RIT2Q99578 217 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.4□□□□□ -0.91e-7■□□□□ 8.4
PCNX1-204ENST00000553428 RNPEPQ9H4A4 650 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 PKD2L1Q9P0L9 805 aa9.4□□□□□ -0.9
PCNX1-204ENST00000553428 BRCA2P51587 3418 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 TMEM265A0A087WTH1 108 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 IGKV6D-21A0A0A0MT36 114 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.39□□□□□ -0.91
PCNX1-204ENST00000553428 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.39□□□□□ -0.91
PCNX1-204ENST00000553428 RRN3P2A6NIE6 340 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 SOX1O00570 391 aaPredicted RBP9.39□□□□□ -0.91
PCNX1-204ENST00000553428 DHX15O43143 795 aaKnown RBP9.39□□□□□ -0.91
PCNX1-204ENST00000553428 CKBP12277 381 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 ACTN1P12814 892 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 FDPSP14324 419 aaKnown RBP9.39□□□□□ -0.91
PCNX1-204ENST00000553428 STAT5BP51692 787 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 ADAM17P78536 824 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 HMGN5P82970 282 aaKnown RBP9.39□□□□□ -0.91
PCNX1-204ENST00000553428 TRIM29Q14134 588 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 TRIM71Q2Q1W2 868 aaKnown RBP9.39□□□□□ -0.91
PCNX1-204ENST00000553428 FAM160B1Q5W0V3 765 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 MIS18BP1Q6P0N0 1132 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 TAF2Q6P1X5 1199 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 ZNF365Q70YC5 407 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 LRRC8DQ7L1W4 858 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 C16orf59Q7L2K0 433 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 NEK8Q86SG6 692 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 TRIM50Q86XT4 487 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 SMAP1Q8IYB5 467 aaPredicted RBP9.39□□□□□ -0.91
PCNX1-204ENST00000553428 DHX38Q92620 1227 aaKnown RBP9.39□□□□□ -0.91
PCNX1-204ENST00000553428 LENG9Q96B70 501 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 SCLYQ96I15 445 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 MBOAT7Q96N66 472 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 PCDH10Q9P2E7 1040 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 KCNJ14Q9UNX9 436 aa9.39□□□□□ -0.91
PCNX1-204ENST00000553428 MBLAC1A4D2B0 266 aaPredicted RBP9.38□□□□□ -0.91
PCNX1-204ENST00000553428 EDIL3O43854 480 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 BAIAP3O94812 1187 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 CCNE2O96020 404 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 PSAPP07602 524 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 ACRP10323 421 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 SFNP31947 248 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 KRT2P35908 639 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 MCM2P49736 904 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 JAK3P52333 1124 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 PPFIA1Q13136 1202 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 GRIK4Q16099 956 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 PPP4R3AQ6IN85 833 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 ABHD15Q6UXT9 468 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 RPAINQ86UA6 219 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 RSPH3Q86UC2 560 aa9.38□□□□□ -0.91
PCNX1-204ENST00000553428 RDM1Q8NG50 284 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms