RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, human

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1B-208	ENST00000552984	MARK3	P27448	753 aa		13.2	□□□□□ -0.3
TUBA1B-208	ENST00000552984	TCF7	P36402	384 aa	Predicted RBP	13.2	□□□□□ -0.3
TUBA1B-208	ENST00000552984	KCNQ1	P51787	676 aa		13.2	□□□□□ -0.3
TUBA1B-208	ENST00000552984	ARHGAP4	P98171	946 aa		13.2	□□□□□ -0.3
TUBA1B-208	ENST00000552984	EXOSC10	Q01780	885 aa	Known RBP	13.2	□□□□□ -0.3
TUBA1B-208	ENST00000552984	IKBKE	Q14164	716 aa		13.2	□□□□□ -0.3
TUBA1B-208	ENST00000552984	SKIV2L	Q15477	1246 aa	Known RBP	13.2	□□□□□ -0.3
TUBA1B-208	ENST00000552984	RUFY4	Q6ZNE9	571 aa		13.2	□□□□□ -0.3
TUBA1B-208	ENST00000552984	NLRX1	Q86UT6	975 aa		13.2	□□□□□ -0.3
TUBA1B-208	ENST00000552984	MYOCD	Q8IZQ8	938 aa		13.2	□□□□□ -0.3
TUBA1B-208	ENST00000552984	ZBTB10	Q96DT7	871 aa		13.2	□□□□□ -0.3
TUBA1B-208	ENST00000552984	ASB2	Q96Q27	587 aa		13.2	□□□□□ -0.3
TUBA1B-208	ENST00000552984	USP26	Q9BXU7	913 aa		13.2	□□□□□ -0.3
TUBA1B-208	ENST00000552984	PCDHA6	Q9UN73	950 aa		13.2	□□□□□ -0.3
TUBA1B-208	ENST00000552984	PCDHA8	Q9Y5H6	950 aa		13.2	□□□□□ -0.3
TUBA1B-208	ENST00000552984	UBIAD1	Q9Y5Z9	338 aa		13.2	□□□□□ -0.3
TUBA1B-208	ENST00000552984	BDP1	A6H8Y1	2624 aa		13.2	□□□□□ -0.3
TUBA1B-208	ENST00000552984	COL4A6	Q14031	1691 aa		13.19	□□□□□ -0.3
TUBA1B-208	ENST00000552984	GSTTP1	A0A1W2PQM5	241 aa		13.19	□□□□□ -0.3
TUBA1B-208	ENST00000552984	LINC01553	A4QN01	128 aa		13.19	□□□□□ -0.3
TUBA1B-208	ENST00000552984	CDC45	O75419	566 aa		13.19	□□□□□ -0.3
TUBA1B-208	ENST00000552984	FUT2	Q10981	343 aa		13.19	□□□□□ -0.3
TUBA1B-208	ENST00000552984	MTMR1	Q13613	665 aa		13.19	□□□□□ -0.3
TUBA1B-208	ENST00000552984	RTN1	Q16799	776 aa		13.19	□□□□□ -0.3
TUBA1B-208	ENST00000552984	PLEKHG4	Q58EX7	1191 aa		13.19	□□□□□ -0.3
TUBA1B-208	ENST00000552984	RNF20	Q5VTR2	975 aa		13.19	□□□□□ -0.3
TUBA1B-208	ENST00000552984	CYP2W1	Q8TAV3	490 aa		13.19	□□□□□ -0.3
TUBA1B-208	ENST00000552984	ADAMTS19	Q8TE59	1207 aa		13.19	□□□□□ -0.3
TUBA1B-208	ENST00000552984	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.19	□□□□□ -0.3
TUBA1B-208	ENST00000552984	SYMPK	Q92797	1274 aa	Known RBP	13.19	□□□□□ -0.3
TUBA1B-208	ENST00000552984	GPRASP2	Q96D09	838 aa		13.19	□□□□□ -0.3
TUBA1B-208	ENST00000552984	SENP7	Q9BQF6	1050 aa		13.19	□□□□□ -0.3
TUBA1B-208	ENST00000552984	TMEM260	Q9NX78	707 aa		13.19	□□□□□ -0.3
TUBA1B-208	ENST00000552984	ZNF215	Q9UL58	517 aa	Predicted RBP	13.19	□□□□□ -0.3
TUBA1B-208	ENST00000552984	TTC3	P53804	2025 aa		13.18	□□□□□ -0.3
TUBA1B-208	ENST00000552984	EMSY	Q7Z589	1322 aa		13.18	□□□□□ -0.3
TUBA1B-208	ENST00000552984	KLF18	A0A0U1RQI7	1052 aa		13.18	□□□□□ -0.3
TUBA1B-208	ENST00000552984	SPDYE3	A6NKU9	549 aa		13.18	□□□□□ -0.3
TUBA1B-208	ENST00000552984	GOLGA8A	A7E2F4	631 aa		13.18	□□□□□ -0.3
TUBA1B-208	ENST00000552984	GOLGA8B	A8MQT2	603 aa		13.18	□□□□□ -0.3
TUBA1B-208	ENST00000552984	ADAMTS3	O15072	1205 aa		13.18	□□□□□ -0.3
TUBA1B-208	ENST00000552984	ZBTB43	O43298	467 aa		13.18	□□□□□ -0.3
TUBA1B-208	ENST00000552984	GTPBP6	O43824	516 aa	Predicted RBP	13.18	□□□□□ -0.3
TUBA1B-208	ENST00000552984	CDC27	P30260	824 aa		13.18	□□□□□ -0.3
TUBA1B-208	ENST00000552984	NAPA	P54920	295 aa		13.18	□□□□□ -0.3
TUBA1B-208	ENST00000552984	ADAM17	P78536	824 aa		13.18	□□□□□ -0.3
TUBA1B-208	ENST00000552984	MRPS5	P82675	430 aa	Known RBP	13.18	□□□□□ -0.3
TUBA1B-208	ENST00000552984	XRRA1	Q6P2D8	792 aa		13.18	□□□□□ -0.3
TUBA1B-208	ENST00000552984	DHX32	Q7L7V1	743 aa	Known RBP	13.18	□□□□□ -0.3
TUBA1B-208	ENST00000552984	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.18	□□□□□ -0.3
TUBA1B-208	ENST00000552984	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.18	□□□□□ -0.3
TUBA1B-208	ENST00000552984	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.17	□□□□□ -0.3
TUBA1B-208	ENST00000552984	STXBP3	O00186	592 aa		13.17	□□□□□ -0.3
TUBA1B-208	ENST00000552984	POU3F3	P20264	500 aa	Predicted RBP	13.17	□□□□□ -0.3
TUBA1B-208	ENST00000552984	PPFIA1	Q13136	1202 aa		13.17	□□□□□ -0.3
TUBA1B-208	ENST00000552984	SYNE3	Q6ZMZ3	975 aa		13.17	□□□□□ -0.3
TUBA1B-208	ENST00000552984	UIMC1	Q96RL1	719 aa		13.17	□□□□□ -0.3
TUBA1B-208	ENST00000552984	PCYT2	Q99447	389 aa		13.17	□□□□□ -0.3
TUBA1B-208	ENST00000552984	RAD9A	Q99638	391 aa		13.17	□□□□□ -0.3
TUBA1B-208	ENST00000552984	C17orf80	Q9BSJ5	609 aa		13.17	□□□□□ -0.3
TUBA1B-208	ENST00000552984	ANO3	Q9BYT9	981 aa		13.17	□□□□□ -0.3
TUBA1B-208	ENST00000552984	SUGCT	Q9HAC7	445 aa		13.17	□□□□□ -0.3
TUBA1B-208	ENST00000552984	JADE2	Q9NQC1	790 aa		13.17	□□□□□ -0.3
TUBA1B-208	ENST00000552984		V9GY48	417 aa	Predicted RBP	13.17	□□□□□ -0.3
TUBA1B-208	ENST00000552984	TNFRSF10A	O00220	468 aa		13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	EFCAB14	O75071	495 aa		13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	PPFIA3	O75145	1194 aa		13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	UPP2	O95045	317 aa		13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	CHRNA1	P02708	482 aa		13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	AMH	P03971	560 aa		13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	AR	P10275	920 aa		13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	GHR	P10912	638 aa		13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	ADCY7	P51828	1080 aa		13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	ERVK-21	P61565	698 aa		13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	IGBP1	P78318	339 aa		13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	APOBR	Q0VD83	1088 aa		13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	GRIK4	Q16099	956 aa		13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	TRAPPC12	Q8WVT3	735 aa		13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	SEPT1	Q8WYJ6	367 aa		13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	SEPT8	Q92599	483 aa		13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	GLG1	Q92896	1179 aa		13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	TGS1	Q96RS0	853 aa	Known RBP	13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	UHRF1	Q96T88	793 aa	Predicted RBP	13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	RIC8A	Q9NPQ8	531 aa		13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	KCNH7	Q9NS40	1196 aa		13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	RBM28	Q9NW13	759 aa	Known RBP	13.16	□□□□□ -0.3
TUBA1B-208	ENST00000552984	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.15	□□□□□ -0.3
TUBA1B-208	ENST00000552984	PLXNA4	Q9HCM2	1894 aa		13.15	□□□□□ -0.3
TUBA1B-208	ENST00000552984	DDX39A	O00148	427 aa	Known RBP	13.15	□□□□□ -0.3
TUBA1B-208	ENST00000552984	GNAT1	P11488	350 aa		13.15	□□□□□ -0.3
TUBA1B-208	ENST00000552984	HTRA4	P83105	476 aa	Predicted RBP	13.15	□□□□□ -0.3
TUBA1B-208	ENST00000552984	MGAT3	Q09327	533 aa		13.15	□□□□□ -0.3
TUBA1B-208	ENST00000552984	ITGB3BP	Q13352	177 aa	Predicted RBP	13.15	□□□□□ -0.3
TUBA1B-208	ENST00000552984	TSGA10IP	Q3SY00	556 aa		13.15	□□□□□ -0.3
TUBA1B-208	ENST00000552984	MARCH8	Q5T0T0	291 aa		13.15	□□□□□ -0.3
TUBA1B-208	ENST00000552984		Q6ZUG5	572 aa		13.15	□□□□□ -0.3
TUBA1B-208	ENST00000552984	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.15	□□□□□ -0.3
TUBA1B-208	ENST00000552984	DNAJB3	Q8WWF6	145 aa		13.15	□□□□□ -0.3
TUBA1B-208	ENST00000552984	CDHR1	Q96JP9	859 aa		13.15	□□□□□ -0.3
TUBA1B-208	ENST00000552984	JAKMIP1	Q96N16	626 aa	Known RBP	13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms